Basic Information

Gene Symbol
ct
Assembly
GCA_946478135.1
Location
CAMLCK010000121.1:198082-227031[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 5.1e-27 4.9e-23 81.6 0.0 3 70 308 376 306 383 0.94
2 3 5.9e-32 5.7e-28 97.4 0.0 4 77 708 782 706 784 0.96
3 3 8.4e-31 8.1e-27 93.7 0.0 3 75 911 984 909 988 0.95

Sequence Information

Coding Sequence
atgttTTTCGCGATCCCAGCCAACTGTGTCCAAGTCCCTGCGTGGTTCCGCATATATACGTATCTTGAGGATGGGATCGAGTTCCGGTCGAGCGCGCACCTTGATGCACCAACAATTGATATCGAAGGTCGGCAAATAACAGACCACTCGCACACCTGGCAATCACAATATAACCTTGTTGTAATAGACACAAGGTTCGATTTGCAATTGTGTTATGAATGTAGTAGAGCGGAAGAGATCGCCCAGCTAGTAGAAGACGTGCGCAGGCTCCAGTCATCGCTTGCAGCGCTGCAAGAGGCGCACGCGCAGCAGCTGCAGCGGCTGGAGGAGAGGCTGGATGAGAAGAAACAGCACATTGCTCGGTTGGAGGCGAGGCTCGACGGACAGCGGGACTATGATGATGTCAAGAGAGAGATCAACATGCTCCGCTCGCTAGACCTGGGCAGCGAGCGCTCCGATCGCTCTGACCGCCTGGATCGCTCAGATCGCTCAGATCGCCTAGAACGCCTAGAGCGCCCTGATAGGCTAGACCGCCCAGACCGGCTAGAACGCCTAGAACGTGAGCGAATCGAGCGCAAGCCTGAGCGCTCCCCAAGCGTTGCACCGAACGAACGAAGCTCTGTGGAGCGCGAACGGAGTGCTGAAAGAAGAGAACCAGGTCCCGAGGAATGGCCCAGCACGCCTCCGCTCAACAATAACACGACCCACCACAACAACAATGGTCCGACGCCGCTACCGTTGCCGCCGCCGAGCCCCTTCCGTTTCGACGACCACCGTCCCTACCGCTTTGCTGACGACATGGGGCCCTTACCACCAGGCGCTCTCGTCGGTCGACTCGGAGACTCTCTGATCCCCAAAGGGGACCCCATGGAAGCGAGATTGCAAGAGATGCTGCGATACAATATGGATAAATACGCAAACAGCAATCTGGACACTCTGCACATCAGTCGAAGAGTCAGAGAGTTGCTTTCGGTCCACAATATTGGACAGCGGTTATTCGCAAAGTACGTCCTGGGGCTATCTCAAGGGACGGTGTCAGAGCTTCTGTCGAAACCGAAGCCCTGGGATAAGCTGACGGAGAAGGGACGGGACTCCTATAGGAAGATGCACGCGTGGGCTTGCGACGAGGCCGCAGTGATGCTACTCAAGTCTTTGATCCCTAAGAAAGTCGGTTCAAAGGATGGTAGTATTGGTCCTGGTGGGTTCGGAAGGTCTGACGGCGAGGGAGACGACAGACTGGCTCACATCCTCAGCGAGGCTTCTCATATGATGAAGACGCCCTCGGGAGCGCCCATAAACGATGATTCTAGAAGCAATGAAGACTCCAGCTCGCCTAGGACGCAGTGTCTTTCACCTTTCTCTAAGGACTCGAGCCAAAACAGGAGGCTGAAGAAGTATGAGAACGATGACATTCCTCAGGAGAAGGTGGTCCGAATCTATCACGAGGAGCTGGCTAAGATCATGACCAGGCGAGTCGAGGATATCCGCCACAACCGGGAGGGCTTCCCTGGTATGTTTCCCCCCTTTTTCAGCGGTGGCATGCCCCCCCACATGGAACGGCCTCCCGAAGACATCCGCATGGCTTTAGAAGCGTACCACAGAGAACTAGCCAAGATCCAACCTGGAGGCAACATCCCCAATCTACACAACCTCCCGGGAATGCCTCCTTTCCCGAACCTTCTCGCTCTACAGCAGCAGGCCATGCAACAAGCTCAGAACCAACACATCAACGGTGGAGCTGTCCAAGATCTCTCACTCCCAAAGGATAAGAACGCCAAAATAAATGGAATGACTGATAGCGATAAGGAGAGATCTATGGATGCTGAGGAAGCGATCCGACACGCTGGCAGCGCGTTCTCCCTCGTCCGACCGAAGCTGGAGCCTGGACAGTCCACGGGGTCCTCTGCTTCAAGTCCGTTAGGAAACGCTATTCTACCCCCAGCGATAACACCTAACGATGATTTTAACACTTCAGCGGCCGCCAGCCCACTCCAACGCATGGCTTCTATAACCAACAGCCTGATCTCTCAGCCCAACAACCCTCCTCACCACACACCAGCTCAACGATCAATGAAAGCAGTTCTTCCACCAATCACACAACAACAGTTCGATCTCTTCAACAACTTGAATACTGAAGACATCGtccgaagagtgaaagaagctTTGAGCCAGTACTCGATCAGTCAAAGACTGTTCGGAGAGTCTGTGCTAGGGCTGTCGCAAGGATCGGTTAGTGATCTGCTGGCGCGGCCGAAGCCCTGGCACATGCTGACGCAGAAGGGCCGTGAGCCTTTCATCCGGATGAAGATGTTTCTGGAAGATGACAACGCGGTGCACAAACTGGTCGCCAGCCAGTACAAAATCGCACCAGAGAAGCTCATGAGGACTGGAAACTACAGCGGAGCACCGATATGTCCGCCAAACATGAACAAACCAATGCCTCCAACACAGAAAATGATCTCAGACGCCACCTCTCTGCTCAGCAAGATGCAGCAGGAACAGCTCCTAGGACCTGGTCACCTGGGGCACCTGGGGCAGCCTCCACCACTTCTGTTGACACCCCCCGGCTTCCCCCCACACCACGCGGTGACCCTTCCTCCCCAACACCACGACAACAACAACAAGGAGAGGAAACCGCCACCGCCACCACAACCACACCACCATCCACCAATCATGCGCAGTCTCCACCAACACATATCCCCCAGCGTCTACGAAATGGCTGCGCTAACGCAAGACCTCGACACGCAAACCATCACCACAAAAATCAAGGAGGCTTTACTCGCGAACAACATTGGACAGAAAATCTTCGGAGAAGCTGTGCTAGGTCTTTCCCAAGGGTCGGTCAGCGAGCTGCTATCCAAGCCCAAACCCTGGCATATGCTGAGCATCAAAGGCAGAGAGCCGTTTATAAGAATGCAACTGTGGCTCAGCGACGCTCACAACATCGACCGCCTGCAAGCCCTGAAAAACGAGCGACGGGAGGCCAACAAGAGACGTCGCTCAAGCGGCCCCGGCCAAGACAACTCCTCCGACACGTCATCCAATGACACGTCAGAGTTCTATCACTCTAGCTCTCCCGGGCCGACCACGGGTGCTCCCTGCGCTAAGAAACAAAGGGTTCTATTCTCTGAAGAGCAGAAAGAGGCTTTGAGGCTTGCGTTCGCTCTTGACCCATACCCTAACATGCCGACGATAGAATTCCTTGCCTCAGAACTAGGGTTGTCGACGCGAACGATAACCAACTGGTTCCACAACCACAGGATGCGGTTAAAGCAGCAAGCGCCGCATGGTCTCCCAGCAGAACCACCCGCAAGAGACCAGTCTTCTGCTCCATTCGACCCGGTCCAGTTCCGTTTACTCCTCAACCAGAGATTGTTGGAACTGCAGAAGGAAAGGATGGGCTTGGCAGGAGTACCGCTTCCGTACCCGCCGTACTTTGCCGCTAATTCTAATCTAGCTGCTTTGATCGGTCGTGGACTAATACCTCCAGACGACGTGGTGAAGGACCAGAGTGGAGGTCTTGATCTATCCATGCCGTTGAAACGGGAACCAGACGGTGAGGATTACGAGGATGATGATGTGGAAAGCAACCTCGGGTCGGAAGATTCGCTGGACGATGAGTCAAAGACTGAGCCAAAAGCGGCGTCGACGCCGACCGCCCGCTCCAGCAGACGGAAACCAGCCGCGCCGCAATGGGTCAACCCTGACTGGCAAGAGGACAAGCCGAGAAACCCAGACGAGGTCATCATCAACGGAGTCTGCGTGATGCGAAGCGATGACTTCAGGCGAGAGTCTGAGGAGACGGTTCGTATTGAGCCCTCTCCAGTCCCTAGGGAAGGGTCTCCCCTTCCTCCAAGAACCCCTCAGACCCCGCAGACCCCGCAGACTCCGCGGCCGCCGCACACGCCCGATGACGTAATCCCTGAGGACAAGATAAAGTCTGAGACGGAGGACGATCGGTGGGAGTACTGA
Protein Sequence
MFFAIPANCVQVPAWFRIYTYLEDGIEFRSSAHLDAPTIDIEGRQITDHSHTWQSQYNLVVIDTRFDLQLCYECSRAEEIAQLVEDVRRLQSSLAALQEAHAQQLQRLEERLDEKKQHIARLEARLDGQRDYDDVKREINMLRSLDLGSERSDRSDRLDRSDRSDRLERLERPDRLDRPDRLERLERERIERKPERSPSVAPNERSSVERERSAERREPGPEEWPSTPPLNNNTTHHNNNGPTPLPLPPPSPFRFDDHRPYRFADDMGPLPPGALVGRLGDSLIPKGDPMEARLQEMLRYNMDKYANSNLDTLHISRRVRELLSVHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDEAAVMLLKSLIPKKVGSKDGSIGPGGFGRSDGEGDDRLAHILSEASHMMKTPSGAPINDDSRSNEDSSSPRTQCLSPFSKDSSQNRRLKKYENDDIPQEKVVRIYHEELAKIMTRRVEDIRHNREGFPGMFPPFFSGGMPPHMERPPEDIRMALEAYHRELAKIQPGGNIPNLHNLPGMPPFPNLLALQQQAMQQAQNQHINGGAVQDLSLPKDKNAKINGMTDSDKERSMDAEEAIRHAGSAFSLVRPKLEPGQSTGSSASSPLGNAILPPAITPNDDFNTSAAASPLQRMASITNSLISQPNNPPHHTPAQRSMKAVLPPITQQQFDLFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGNYSGAPICPPNMNKPMPPTQKMISDATSLLSKMQQEQLLGPGHLGHLGQPPPLLLTPPGFPPHHAVTLPPQHHDNNNKERKPPPPPQPHHHPPIMRSLHQHISPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNIDRLQALKNERREANKRRRSSGPGQDNSSDTSSNDTSEFYHSSSPGPTTGAPCAKKQRVLFSEEQKEALRLAFALDPYPNMPTIEFLASELGLSTRTITNWFHNHRMRLKQQAPHGLPAEPPARDQSSAPFDPVQFRLLLNQRLLELQKERMGLAGVPLPYPPYFAANSNLAALIGRGLIPPDDVVKDQSGGLDLSMPLKREPDGEDYEDDDVESNLGSEDSLDDESKTEPKAASTPTARSSRRKPAAPQWVNPDWQEDKPRNPDEVIINGVCVMRSDDFRRESEETVRIEPSPVPREGSPLPPRTPQTPQTPQTPRPPHTPDDVIPEDKIKSETEDDRWEY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01338275;
90% Identity
iTF_00700898;
80% Identity
iTF_00705881;