Basic Information

Gene Symbol
kn
Assembly
GCA_946478135.1
Location
CAMLCK010000020.1:4873163-4890302[-]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1e-141 7.4e-138 461.1 0.0 180 387 6 231 3 235 0.98
2 2 3.1e-08 0.00023 20.3 6.9 421 560 241 382 232 389 0.68

Sequence Information

Coding Sequence
ATGCAACTTTTTAGAATCCATCCatttttccTCAAATTCTTCCTGAAGTGCAATCAGAACTGTCTGAAAAACGCTGGCAATCCTCGGGACATGCGAAGGTTTCAAGTGGTGATATCAACGCAAGTGATGGTCGACGGCCCTCTGTTGGCGATATCAGACAACATGTTTGTTCACAATAACAGCAAGCACGGCCGAAGGGCGAAACGACTCGACCCTACTGAAGGTATTGACGCCGCGGCTGATAATACTTcGGGTCTATACCCGCCCCTACCAGTGGCCACGCCGTGCATAAAAGCGATATCGCCGAGTGAAGGCTGGACGTCCGGAGGCTCGACGGTTATCATAGTAGGGGACAACTTCTTCGATGGACTACAAGTTGTGTTCGGGACCATGCTTGTTTGGAGCGAGCTTATAACTTCTCACGCGATACGAGTGCAAACACCTCCTCGGCATATACCGGGCGTGGTAGAAGTCACATTGTCGTACAAAAGTAAGCAGTTCTGCAAGGGAGCACCAGGACGATTTGTCTATGTTTCAGCGCTGAACGAGCCTACGATAGATTACGGATTTCAGAGGCTCCAGAAACTTATACCGAGGCATCCTGGTGACCCGGAGAAATTACCTAAGGAAATAATCCTCAAACGAGCAGCGGACCTAGCCGAAGCGCTGTACTCCATGCCACGTAACAACCAGCTCGGCTTGGGCGGGCCTCGGTCGCCAACCTCCAGCATGTCTTTCAACTCTTACACGGGACAACTTGCTGTTAGTGTGCAGGATACTGCGGCTTCGCAGTGGACTGAAGAGGAGTATGCCCGTAGCGGTGGGTCTGTGTCGCCGAGGTATTGTTCTGCTGCATCGACTCCCCACGCCGCGCCTGCATCCTACCCGCATCCGCAACACTACCCCGCGCCTCCTACCTCGCTTTTCAACACTACCTCAATGTCTCTAGGACCGTACCATCCAGCCAACATGAATGGGCTATCTGACCACTATAACGCGTATAATACGCGAGATAGCGCCTATTATGAAAGGGATGAGGAAATCTCTAAGAGATGTCCGGCAAACACTCATTCGAAATGCAATGTGAAAGAGGATAAAGGAGCCAGGAGCGCTTTTGCAGTAGTAAGGCACCCCAATGCGTCTCAGAATTGGCAGCTCGCGGTACAATTATCATCACCATTTAGCGTGAATCCCTTCTCCCTACCAACATGCAGCGCCCAGCAGTACGCCCAAACAGCCCCTCTAGCCTCCAAGTAG
Protein Sequence
MQLFRIHPFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVMVDGPLLAISDNMFVHNNSKHGRRAKRLDPTEGIDAAADNTSGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLGLGGPRSPTSSMSFNSYTGQLAVSVQDTAASQWTEEEYARSGGSVSPRYCSAASTPHAAPASYPHPQHYPAPPTSLFNTTSMSLGPYHPANMNGLSDHYNAYNTRDSAYYERDEEISKRCPANTHSKCNVKEDKGARSAFAVVRHPNASQNWQLAVQLSSPFSVNPFSLPTCSAQQYAQTAPLASK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00036409;
90% Identity
-
80% Identity
-