Basic Information

Gene Symbol
Kdm5
Assembly
GCA_946478135.1
Location
CAMLCK010000006.1:3500140-3507763[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.1e-14 8.9e-11 42.7 0.0 9 89 418 495 410 495 0.80

Sequence Information

Coding Sequence
ATGTTCGAGGCTACAGACTCGACGGATACGATTGACAAGAACGTGAATTATCCGTCTAAAGATCTTGAAATGCCTATCCAGCCAGAACCTGTTAATGATTGGAATTTGGAAATGTCGAATTTTCATTTTAACGCATGTGATATGGATGCTATCcagccagaaactgataatacGGACCATAATGTTAATTATCCGTCTAATGATCCTGATATGCCTATGCCGCCAGTAGAAGAAACGATCATTGGGAATGTGAATTATGCGTCTAACGATCGTGATATGGCTCCTAGCACGCTAGAATCAGATATTATAGACCTTACGTCATCTGAATCTTTAACTGATTCAAAGCCCGATATAAATGACCCGATTTCATGCGATACCGCAGAAGTTACAAAAGTGAATTCTCCGTGTAACGATATTGAAATGACTCCTATCCAGCCAGAATCAAATGTAAACAACCTAAGCTCATCTGAGTGCCAGCTGCAGAATATTGCTGACGTCCATGAACTACTAAGTTCTGAAGTATCTTGCAACACCTGCCGACGTTGCACACTAATAACTAAGTACAAACAAATTCTAAAAATGGTGCCAAAAAGGCGTGAAGCCGAGCCAAATTTTGAAGACATAGCGCAGCTTCCATCATGTCCCTTCGAGTCGGACGATGAATACAGCTTTTTTTTCCTTGATGACTGTAAAAAGCGTGAGAAAATCTGCAACctgataaaatcaaataaattaatattgtgGTTGATCAACCCTCAGATAGACTTGGATAATAAGTACGGGTTCGAAATGGAGCACATGACAGGCACATTAAAACGAAGATTAAAATTAGACTCTGAAAATGACGTAATGGTAGACATCCTTTTAAATCGGGTAGATTATTTGAATTGCTCCATGGTCGATAATGAGGACATGAATCTGGAAAGACCATTGCGAAAAACGATTATACCGGAGTGGAGTGAAGCACCAGTGATAAATCTAGAGAGTGACGATGAAATAGAGGAAGAACCTCTAGTGTATCGTCCCACGCTGGATGAGTTCAAGGACCCTATCACTTACATAAGTAGTATACAAAAGAAGGCATCAAAAAACGGCATATGCAAAATCATCCCTCCCGATGGCTTCCACGTGCCTTGCCACTTGGATGAAGATTGTATGTTTGGCACCACCAACCAGCATCTAGGCCGGTTGTATTATCGCTGGGGACCTAACACCAGAGAGTTTGCAACGATTCAGACGAGTATGACTTCGCTAACACCGGAACATAAGGAACGTTTCACTAAGGCACCATTGtttGGTGGAATCGAAGTAGATCTGGTGAAGTTATACAATCATATATTGGAGGAAGGCGGCATACAAGGACATTTATCACGTGATGAGAAATGGGCACGCATAGCAGCAAAAATGAATTTGGTGTTTCCGGATAGCAAACTAGATTGGAAGAAACTTGAAAACATTTATTGTAAACATGTTTTGCCTTACGAGTCGTTGACATTCGCTGAGCGAGAGGCCGCAGGTAAAAAAGTAGATAAGATTTGGGAAACCCGTTTGAAGAACCTAATTCTACGCGCAAGGCAACCTCTGCACTATCAACACGCTATGCTCAGCGAGTCGAATGTGCCTGAATATGAAGAAAGGGATTTCCCAGATCCTGAATTAGCAGATCTATACAATCTCTGTAAGCCGATCTTTGACAAGATCGAGGAGTGCACATGCAAAGGACGTTCAATGAACCTTGCCACATTTCGCCGGatATCCAAAAAAATTGAAGCTATGCGTTTTCCAAATGGTGTTCCGAGCGATGTAGAGGAAATTGAAAAGCATTTTTGGAAAATCCTGAACCGTAGGGATGAGCACGTATGCGTGCAGTCTGCTTTTATTGACACGTCGGTTAACAATCTGGGCCACGAGTCGGACCCGAAGAAACGTGGTGGTAGTCATCCTTGGAACCTGAAGCGAATCGGCGAGAATCCGAACAACATCTTGCACTCGCTGGGGAAAGCGCTCAGCGTCACTGTGCCAACATTGTGCCTGAACCAAATGTTCAGCACCAGTTGCTGGCATAAGGACCCCCATAAGTTGGCGTGGATGGACTATATGCACGAAGGTGCCACAAAAATATGGTACTCAGTTCCCGATGAGGGCGCGCCTGCCTTCCGATGCGCAGTGCAAATGATGACAGAGGCGGCTGTGCAAGACAAAGGCATCTGGCTCGCCTCAGACACCACCATGATCCCGCCTGGATACCTTATGGCATGCGGCGTTCCCTTTAAGAGGATAGAACAGAACCCTAACGAGTTTATTGTAGTGTTCCCGGGTGCCTACGCTTGTTCGATCTCAACTGGACTTTCTGTAGCTGAGAGTATATACTTTGAGAACAATACCTGGCTGGATCGCGTTGAGAAGATTTTTGAGGTCCCGGTCCCGCGGAAGGGGTCGCCACGGGCGGTCGTCTTCCGGTGGCCGGTTTTAGTGGGCTGCGATGTGGTGAAGGTGGGCGTGGTGTCCGTTGTCGGCGCGGTCGTACATCCTCCGCGCCGACCGAACAACGAAGTCTTCGATGGGGGCGACCTGCAGGTCGTGGGCGATGACGTCGTTCCTGACGTAGCAGCCCGCGCCCGTGCAGATCCTTAG
Protein Sequence
MFEATDSTDTIDKNVNYPSKDLEMPIQPEPVNDWNLEMSNFHFNACDMDAIQPETDNTDHNVNYPSNDPDMPMPPVEETIIGNVNYASNDRDMAPSTLESDIIDLTSSESLTDSKPDINDPISCDTAEVTKVNSPCNDIEMTPIQPESNVNNLSSSECQLQNIADVHELLSSEVSCNTCRRCTLITKYKQILKMVPKRREAEPNFEDIAQLPSCPFESDDEYSFFFLDDCKKREKICNLIKSNKLILWLINPQIDLDNKYGFEMEHMTGTLKRRLKLDSENDVMVDILLNRVDYLNCSMVDNEDMNLERPLRKTIIPEWSEAPVINLESDDEIEEEPLVYRPTLDEFKDPITYISSIQKKASKNGICKIIPPDGFHVPCHLDEDCMFGTTNQHLGRLYYRWGPNTREFATIQTSMTSLTPEHKERFTKAPLFGGIEVDLVKLYNHILEEGGIQGHLSRDEKWARIAAKMNLVFPDSKLDWKKLENIYCKHVLPYESLTFAEREAAGKKVDKIWETRLKNLILRARQPLHYQHAMLSESNVPEYEERDFPDPELADLYNLCKPIFDKIEECTCKGRSMNLATFRRISKKIEAMRFPNGVPSDVEEIEKHFWKILNRRDEHVCVQSAFIDTSVNNLGHESDPKKRGGSHPWNLKRIGENPNNILHSLGKALSVTVPTLCLNQMFSTSCWHKDPHKLAWMDYMHEGATKIWYSVPDEGAPAFRCAVQMMTEAAVQDKGIWLASDTTMIPPGYLMACGVPFKRIEQNPNEFIVVFPGAYACSISTGLSVAESIYFENNTWLDRVEKIFEVPVPRKGSPRAVVFRWPVLVGCDVVKVGVVSVVGAVVHPPRRPNNEVFDGGDLQVVGDDVVPDVAARARADP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-