Basic Information

Gene Symbol
osa
Assembly
GCA_946478135.1
Location
CAMLCK010000039.1:1354275-1378399[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 6.3e-26 2.6e-22 79.7 0.0 2 89 292 376 291 376 0.94

Sequence Information

Coding Sequence
ATGGATCTGACAGGTCAGAACAGCAATGACTCAGGCGGTAGTGGGAGCGCTGGGCGCGCCACCACACCACACCTGAGGCCTACACCTAGCCCCACCGGCTCCAGTGGATCGCGATCCATGTCACCGGCTGTTGGCACTCAGAACGTATCGATGCCGCCGCGAACATCGTCTGGTTTGCCGGACGGCAGCGGCGCGCCGCGACCAGGCGCGCCGGGCGGGCAGCCGCCGCCGGGGCCTGCGCCCCAGGGCGGCCCTCCGCCCGGCGCCATGGTCGGCCAGCCCTACGGACACCACGGCGCGTACAAGGCGCCGCACTACCCGCCGCAGCCCTACGTCTACCCGAGGAACCACCATCCTTACCCCTACGGCGGGTACCGGCCGCCCCCGCCGCATCCGCCACAACATTACCAACCTCCTCCGATGAAGCAGCAAATGGGCGGCAGACACATGGGTCCGCCGGGCCCGATGCCGGAGGGCGCGATGCCTCCGCCGACGGCGCCCGGCGAGTCGCACGACAACGGCCCAGCGGCGCAGCCCGCGATAGCACTCGTCACCACCGGCCCCGACGGCGCGCCGCTCGATGAGGGTAGTCAGCAGAGTACGTTAAGCAACGCCTCAGCAGCATCAGGCGAGGACACATGCGCATCGGGCTCCGGCAAAGGGTCTCGCAAGGAGTACGGCAGCGCGGCGCCCTCGCCGTCTCCGGGCGGCGCTTCGCATTCCTCCCTACACGACGACTACGAGGGCGCGCCTTCGCCCTGGCCGCGCCCGCCCTCTAGTCCTGTCTTTAACAGTCACATACAGCCGGAGTCCTACAGATCAAAGAAGTCGGACTCGCTGGGCAAGCTTTACGAGATGGACGACGCGCCGGAACGCCGGGGATGGGTGGAGAGACTGCTGGCGTTTATGGATGAGCGACGGACGCCCATCGCCGCCTGCCCGACCATCTCCAAGCAGCCGTTGGATCTCTACCGGCTGTATCTGCTAGTGCGGGATCGAGGGGGTTTCGTAGAGGTGACAAAGAACAAAACGTGGAAAGACATTGCCGGTCTTCTCGGCATCGGTGCTTCGTCGTCAGCCGCGTATACGCTTCGGAAGCACTACACGAAGAACCTGCTTGCGTACGAATGCCACTTCGATCGCGGCGGCATTGACCCCCAGCCGATCATCAACCAGGTAGAGGCGTCTACGAAGAAGAAGAGCGGAAAAGCTAACAATACGTCCAGTGCAGGGTCATCGAATTCACAAGAATCATTCCCGAGCGGCGCGCCGGCCGGCGGAGCCGCCATGGACGGGTACCCGGCGCAGTATCCTGGGTACCCGCCTCAGCCCAACCATTCACAAGGCGGTGGGCCGGGTGGCGACAACCTAGCCGCCTCCAATCCTTTCGACGAGCCGCCGGGGCCGAGAAGACCCCCAGGTTACCAACAAGGTTACGGATACGAGTACGGATCTCCCTATCAACCCAATAGGCCTGTTTACCCTCAGTACGGACCCGATGGGGACAGAGGGTACCGCGGCAGCGGCGAGCAGTACCAATACGGCGGGTACGGCGGTGCGTACCGCAGCGGCGCACCCCCCGGCACGCCCCCGCCCCCCGCGCAGCAGTACCCCGAGTACTACCGCCCGCCGCATCCGCACCCCGCGTCACACCCGCCTCAGCACCCCGGCAGCCATCCGCCGCAGCATCCCGCCAGCCATCCGCCCGCGCCCTCGCCTAACCACCAGCCGCAGTCACATCAGCCACCTATTGAGATGTCGGGAACCGGTAACCTAATGAGCTCGCAGCTAGCCCGACAGCTGGTAGCGCCGCTGCCGCCGACGCAGAGACCTTCCTACGTACGGACGTTTGTACCACGCACTCAACACCGCTTCCCATCGATTGGCGATACTCTCATACTCACACCCACGCACAAACCACCACAAGCCCATTCACGACTTACATTCGTCTAA
Protein Sequence
MDLTGQNSNDSGGSGSAGRATTPHLRPTPSPTGSSGSRSMSPAVGTQNVSMPPRTSSGLPDGSGAPRPGAPGGQPPPGPAPQGGPPPGAMVGQPYGHHGAYKAPHYPPQPYVYPRNHHPYPYGGYRPPPPHPPQHYQPPPMKQQMGGRHMGPPGPMPEGAMPPPTAPGESHDNGPAAQPAIALVTTGPDGAPLDEGSQQSTLSNASAASGEDTCASGSGKGSRKEYGSAAPSPSPGGASHSSLHDDYEGAPSPWPRPPSSPVFNSHIQPESYRSKKSDSLGKLYEMDDAPERRGWVERLLAFMDERRTPIAACPTISKQPLDLYRLYLLVRDRGGFVEVTKNKTWKDIAGLLGIGASSSAAYTLRKHYTKNLLAYECHFDRGGIDPQPIINQVEASTKKKSGKANNTSSAGSSNSQESFPSGAPAGGAAMDGYPAQYPGYPPQPNHSQGGGPGGDNLAASNPFDEPPGPRRPPGYQQGYGYEYGSPYQPNRPVYPQYGPDGDRGYRGSGEQYQYGGYGGAYRSGAPPGTPPPPAQQYPEYYRPPHPHPASHPPQHPGSHPPQHPASHPPAPSPNHQPQSHQPPIEMSGTGNLMSSQLARQLVAPLPPTQRPSYVRTFVPRTQHRFPSIGDTLILTPTHKPPQAHSRLTFV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01509363;
90% Identity
-
80% Identity
-