Etri013565.1
Basic Information
- Insect
- Eupithecia tripunctaria
- Gene Symbol
- stc
- Assembly
- GCA_955876795.1
- Location
- OY041608.1:3133483-3143960[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.56 9.6e+03 -2.4 5.9 13 19 47 53 46 53 0.93 2 10 2 3.4e+04 -4.1 2.2 6 10 83 87 83 87 0.94 3 10 0.0015 26 5.9 7.0 1 12 93 104 93 104 0.94 4 10 0.038 6.5e+02 1.4 1.1 4 10 108 114 107 114 0.92 5 10 1.5e-09 2.6e-05 25.0 16.2 1 19 120 138 120 138 0.97 6 10 0.81 1.4e+04 -2.9 3.2 11 18 167 177 166 178 0.69 7 10 0.0037 64 4.6 15.2 1 18 177 193 177 194 0.81 8 10 2.8e-07 0.0048 17.8 13.6 1 17 230 248 230 254 0.83 9 10 0.0014 24 6.0 5.4 1 12 260 270 260 270 0.96 10 10 0.77 1.3e+04 -2.8 0.1 8 12 304 308 303 308 0.75
Sequence Information
- Coding Sequence
- ATGCGGTCTTTGGAATTGTATCGAGCAGTGGCGCGTGCGCTGTGTGGGACGGTCGGCTGGCAAGAGGGCGTCGGTCGCTCGCGTCGCCGGATCGTGCACCGCCGCCCGCGTCGCCCGCGCCGCACCCCGCAGGCATGTGGCGCCTGCCCCGTCTGCCCCGAGAGCACTTTAGTGCAATGCCGCTGTGGACACTCGAGCCGCGAGGTGCCCTGCGGTGACCTTCCCGACATGGTGAACAATGTCCTGTGTCAAAAGAAATGTAACAAGAAGCTGTCGTGCGGGCGGCACCGCTGCCGCAACGCATGCTGCGACGTGACGTCACACCGCTGCACCGTGCTGTGCGCGCGCAACCTGACGTGCGGCCTGCACCGCTGCGAGGAGCTCTGCCACACCGGCCACTGTCCGCCGTGCACCACCTTCAGTTTCGACGAGCTGCACTGCGAGTGCGGCGCATCGGTGCTGATGCCCCCGGTGCCGTGCGGCGCGCGCGCGCCCCCCTGCGACGGGCCCTGCACCCGCCCCCGCCCCTGCGGACACCCCCCGCACCACTCCTGCCACTCCGGGGACTGCCCCCCCTGTGTGGTGCTCACTACTAAGAGATGCTATGGCGGACACGAGGAGAGAAAGACCATACCGTGTTCGTTGGAAGAGTTCTCGTGCGGTCTACCGTGCGGAAAGCCGCTGCCTTGTGGAAAGCACAATTGCATCAAGACATGCCACAAAGGATCTTGCGACGCTGGGAAATGCACCCAGCCGTGTACAGAGAAGCGTCCCACCTGTGGCCACCCGTGCAACGCAGCCTGCCACTCGTCGGCGGCGGAGCGTAGTGCCGGCGCCGCGTGTCCGTCGAGCGCGCCgtgccgcgccgccgtgcgcgCCGCCTGCCCCTGCggtcgccgcgccgcgccgcgctccTGCCACGACAACGCCAAGGACCTAGCGCGAATAATGAGTGCCCTAGCTGCAACCAAGATGCAAGAAGGCGGCGCCATCGAGATCACAGAACAGCGTCCCGCAAACATGCTCAAAACCCTGGAATGCGATGACGAGTGCCGAGTCGAAGCCCGCACACGCCAGATGGCGCTAGCTCTACAGATCCGCAACCCGGACGTGTCGGCCAAACTCGCACCTCGCTACAGCGATCACCTCCGCACCACTGCGCAGCGGGAGCCGTCCTTCGCGCAGCAGATACACGACAAGTTGACCGATCTCGTCCAACTCGCTAAGAAGtcaaAACAGAAGACCCGCGCGCATTCGTTCCCATCAATGAACTGGCAGAAGCGCCAGTTCATACACGAACTGTGCGAGCACTTCGGCTGCGAGAGCGTGGCCTACGACGCAGAGCCCAACCGGAACGTCGTCGCTACAGCTGACAAGGAGAAAtCATGGCTGCCTGCAATGAGCGTGTTGGAAGTCCTGGGTCGAGAGACAGGCAAGCGCCGCGTGCCGGGGCCCGTGCTGCGCGCGCCGCCGcagaccgccgccgccgcgccctcTACCGCCAaAACCGCAAGTGGCTGGGCCACGTTAACCTCAACGAAGTCCACCAACGCGTGGGCAGCCCGGAGCAATACTCAAGTGAAGCCCGAACCCAAATCAGAACCCAAGATCGACTATTTCGATAACCCACCGGATAACTGA
- Protein Sequence
- MRSLELYRAVARALCGTVGWQEGVGRSRRRIVHRRPRRPRRTPQACGACPVCPESTLVQCRCGHSSREVPCGDLPDMVNNVLCQKKCNKKLSCGRHRCRNACCDVTSHRCTVLCARNLTCGLHRCEELCHTGHCPPCTTFSFDELHCECGASVLMPPVPCGARAPPCDGPCTRPRPCGHPPHHSCHSGDCPPCVVLTTKRCYGGHEERKTIPCSLEEFSCGLPCGKPLPCGKHNCIKTCHKGSCDAGKCTQPCTEKRPTCGHPCNAACHSSAAERSAGAACPSSAPCRAAVRAACPCGRRAAPRSCHDNAKDLARIMSALAATKMQEGGAIEITEQRPANMLKTLECDDECRVEARTRQMALALQIRNPDVSAKLAPRYSDHLRTTAQREPSFAQQIHDKLTDLVQLAKKSKQKTRAHSFPSMNWQKRQFIHELCEHFGCESVAYDAEPNRNVVATADKEKSWLPAMSVLEVLGRETGKRRVPGPVLRAPPQTAAAAPSTAKTASGWATLTSTKSTNAWAARSNTQVKPEPKSEPKIDYFDNPPDN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -