Etri027777.1
Basic Information
- Insect
- Eupithecia tripunctaria
- Gene Symbol
- nfxl1
- Assembly
- GCA_955876795.1
- Location
- OY041623.1:11550518-11552992[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 2 3.4e+04 -7.8 5.6 15 19 134 138 133 138 0.81 2 20 0.014 2.5e+02 2.7 0.7 4 10 169 175 168 175 0.97 3 20 3.1e-07 0.0053 17.6 15.9 3 19 186 202 185 202 0.95 4 20 0.15 2.5e+03 -0.5 3.5 1 8 227 233 227 234 0.89 5 20 1.9e-08 0.00033 21.5 14.3 3 19 239 255 237 255 0.91 6 20 1.1 1.8e+04 -3.3 0.9 6 10 280 284 279 284 0.86 7 20 1.7e-09 2.9e-05 24.9 11.2 1 19 290 308 290 308 0.99 8 20 1.7e-05 0.29 12.1 19.9 3 19 345 361 337 361 0.86 9 20 0.13 2.3e+03 -0.4 0.5 1 5 370 374 370 379 0.79 10 20 6.7e-06 0.12 13.4 19.0 1 18 395 412 395 413 0.97 11 20 3e-09 5.1e-05 24.1 15.1 1 19 422 440 422 440 0.99 12 20 0.0002 3.4 8.7 7.9 9 19 488 498 486 498 0.90 13 20 0.0062 1.1e+02 3.9 6.3 1 12 508 518 508 518 0.90 14 20 0.35 6e+03 -1.7 3.3 14 18 547 551 547 552 0.85 15 20 2 3.4e+04 -5.3 5.2 8 12 568 572 567 583 0.52 16 20 2.7e-06 0.047 14.6 6.7 1 11 588 598 588 599 0.98 17 20 0.68 1.2e+04 -2.6 1.5 15 18 613 616 612 617 0.82 18 20 8.4e-05 1.4 9.9 14.1 1 18 628 645 628 646 0.86 19 20 1.1e-06 0.018 16.0 14.3 1 18 687 705 687 706 0.89 20 20 1.1 1.8e+04 -3.2 0.7 5 10 735 740 735 740 0.91
Sequence Information
- Coding Sequence
- ATGGCGAGTCGCTACAAAGACGCAGCGGCGAAGCTGCAGCAAAACGTTCAAAAACATCTGCAGGATATGAAGGATCTCTCGTCTTCCGAGGACGAGGAGCCGTGCGAGGCCGGCGTGCTGGAGAGCACGTTCCGCAGCTACTGGCAGGGCGGCGGCGACGCGCACCTGCTCGACAGGACCAAGAACCTCCTGGAGGAGGCGCTCAGCGGCCGCGCCGTGGCGTGCCTCATCTGCATCAGCTCCATCAAGCGCGCGCACGCCGTGTGGAGCTGCGACCACTGCTACTCGCACTTCCACCTCCACTGCATACAGAAGTGGGGCAACGACTCCATCAACCTGCGCAGCATCGAGCCGCAGACGCCGATCAGCGTCCACCGGCCgctcaagatcgagtggtgctGTCCCAAGTGCCGTCACTCGTACAGCAAGGAGGAGATCCCTCGCAAGTACCGCTGCTGCTGCAGCAAGACCGACAACCCGCCCGAGCACCCCTGGCTGCTGCCCCACACCTGTGGGGAGGTGTGCGAGAAAAGACTCTCCACGGAAGACAACTGCAAGCACAAGTGTTTACTGTTGTGCCACCCGGGGCCGTGCCCACCATGCCCTCAAACTGTCAATGGAATATGCTACTGTGAAAATGAACGGAAGAAAGTCAGATGCAGTGCAGCGAAGTGGTCCTGTGGCCATCAATGTAAGAAAACTTTACTTTGTCGGACGCACAAGTGTGAGCAGATCTGCCACGAGGGAGAGTGTCCACCGTGCACCCACACCAGCGTCCAGCCATGCCAGTGTGGAGCTAAGAAGACCAAGAGACTCTGCGAGGACACTATTTGGCACTGCAAAAAACCTTGCAATAAACCATTCTCATGTGGCTTCCATAAGTGTGAAAGAGTCTGCCATTCTGGCAGCTGTGAGGAGTGTCCCAATTCAGGTATGAAGTCCTGTCCCTGCGGAGCAAACCAAAGATATGTGCAATGTCCTGACACCATGGAGACCTGTCTCGGGACCTGTGGGAAGCAGCATGAGGGTTGTGAACATAGCTGCCCAGAGAAGTGCCACAAAGGAGCCTGCCCTCCGTGCCAAGTCATGATTCAGAAGAAGTGTCACTGTGGCTCACACACACGCTCCTTGCCTTGCAACAAGGAGTATAAGTGTGACACCAAGTGCAGAGGGACCAGGCCCTGCGGAAAGCATGGATGCTCCAGGAAATGCTGCAATGGAAACTGCCCTCCATGTGAAAAGACATGTGATAAGCCCCTGCAGTGCGGCCGCCACAAGTGCCCCACCATCTGCCACCGCGGGCCTTGCTATCCGTGCCCCATGTTATCCAAAGTAACCTGCAAGTGCAAGGAAACCTTCATCACAGTCCCATGTGGGAGAGAGCGCTTCACAAAGCCACCAAAATGCAATCTCCATTGTAATGTAAAGTACAAGTGTGGACATCTTGTGGAAAATAAGCATCCCTGCCATTTCGGAGACTGTCCTCCTTGCAAAGCGATCTGCTACAAAGCATTCCCAAATTGCAGTCATGAGTGCAAAGCCATTTGTCATGAATATAAAGCTGTAGTCTTCAAGCAGATTGAGAAACCTGCTACTCCCTGGGATATACAACCGCCAAAAACTAAGATCATGACCTTGGAATGTCCTCCCTGTAACTCGCCCGTCTCTGTGGTCTGCTTCGGCGAGCATGAGACCGACAGCCAGCCGTGCCACGCGGCGGTGCGGCGCCCCTGCGGACGGCCGTGCCGGAAGCCTCTGGCCTGCGGAAACCACAAGTGTACTCAACTCTGCCATCTGAGCAGCCCCGATTCTAACTACCCAAATGTTCCATCCAGCTGCAAGCCTTGCAATAGAGAATGCACTAAGCTCCGTCCCACGAAGTGCTCGCACAAGTGTGCGCGGCGCGCGTGCCACCCTGGCGCGTGCCCGCCGTGCGGCGTGCTGGAGCGCGTGCCGTGCCACTGCGCTGTCACCGAGCTCTACCTCATGTGCACGGAGTACTGCGACGCTACCGAGGACATGTTGTCGTGCAAGCAGCAGTGCCCCCGCAACCTAGCGTGCGGACACCGCTGCAAGAACACCTGCCACTCGGGACCCTGCGGCGAACAGGTCTGCACCAAAAAAACAAAGATACACTGCTTTTGCGGCAACTTGAAGAAGGAAGCGCCTTGCAATACCGTCAGAAGTGGCGAAGCCAAGGTCACGTGCGATGACACCTGCGAAGCTAAGAAAGCTGCGGCAAAGCTAGAGAAAGAGAAGGAACAACAGAGGCTGAAGCAGCTAGAGGAGGAGAGGAACAGACGTGAGCTGGCCGAGTATGAGTGGAAGCTCAGTGGAAAGAAGAAGAAGTACAAGGAAAAGAAGGTTGTGGCAGATACGCAGCAGAAGAGTAGGCTGCAGGAATACTGGATGGCAATATTGCCCATTTTGGTTATGATGATTGCAATGGTTTactatttatctattattaattga
- Protein Sequence
- MASRYKDAAAKLQQNVQKHLQDMKDLSSSEDEEPCEAGVLESTFRSYWQGGGDAHLLDRTKNLLEEALSGRAVACLICISSIKRAHAVWSCDHCYSHFHLHCIQKWGNDSINLRSIEPQTPISVHRPLKIEWCCPKCRHSYSKEEIPRKYRCCCSKTDNPPEHPWLLPHTCGEVCEKRLSTEDNCKHKCLLLCHPGPCPPCPQTVNGICYCENERKKVRCSAAKWSCGHQCKKTLLCRTHKCEQICHEGECPPCTHTSVQPCQCGAKKTKRLCEDTIWHCKKPCNKPFSCGFHKCERVCHSGSCEECPNSGMKSCPCGANQRYVQCPDTMETCLGTCGKQHEGCEHSCPEKCHKGACPPCQVMIQKKCHCGSHTRSLPCNKEYKCDTKCRGTRPCGKHGCSRKCCNGNCPPCEKTCDKPLQCGRHKCPTICHRGPCYPCPMLSKVTCKCKETFITVPCGRERFTKPPKCNLHCNVKYKCGHLVENKHPCHFGDCPPCKAICYKAFPNCSHECKAICHEYKAVVFKQIEKPATPWDIQPPKTKIMTLECPPCNSPVSVVCFGEHETDSQPCHAAVRRPCGRPCRKPLACGNHKCTQLCHLSSPDSNYPNVPSSCKPCNRECTKLRPTKCSHKCARRACHPGACPPCGVLERVPCHCAVTELYLMCTEYCDATEDMLSCKQQCPRNLACGHRCKNTCHSGPCGEQVCTKKTKIHCFCGNLKKEAPCNTVRSGEAKVTCDDTCEAKKAAAKLEKEKEQQRLKQLEEERNRRELAEYEWKLSGKKKKYKEKKVVADTQQKSRLQEYWMAILPILVMMIAMVYYLSIIN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00857272;
- 90% Identity
- -
- 80% Identity
- -