Basic Information

Insect: Eupithecia tripunctaria
Gene Symbol: -
Assembly: GCA_955876795.1
Location: OY041628.1:3942582-3962968[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 2 1.7e+02 3.9 0.2 1 23 258 281 258 281 0.90

2 8 10 8.5e+02 1.7 2.0 1 23 313 335 313 335 0.92

3 8 0.0037 0.32 12.4 1.6 1 23 385 408 385 408 0.96

4 8 8.9e-05 0.0076 17.5 1.1 2 21 413 432 412 433 0.95

5 8 0.0011 0.092 14.1 0.3 1 23 499 522 499 522 0.94

6 8 0.00042 0.035 15.4 0.2 1 23 528 551 528 551 0.97

7 8 5.8e-06 0.0005 21.3 1.6 1 23 561 583 561 583 0.94

8 8 0.00016 0.013 16.8 3.0 2 23 590 612 589 612 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	2	1.7e+02	3.9	0.2	1	23	258	281	258	281	0.90
2	8	10	8.5e+02	1.7	2.0	1	23	313	335	313	335	0.92
3	8	0.0037	0.32	12.4	1.6	1	23	385	408	385	408	0.96
4	8	8.9e-05	0.0076	17.5	1.1	2	21	413	432	412	433	0.95
5	8	0.0011	0.092	14.1	0.3	1	23	499	522	499	522	0.94
6	8	0.00042	0.035	15.4	0.2	1	23	528	551	528	551	0.97
7	8	5.8e-06	0.0005	21.3	1.6	1	23	561	583	561	583	0.94
8	8	0.00016	0.013	16.8	3.0	2	23	590	612	589	612	0.95

Sequence Information

Coding Sequence: atggAGCAAGACGTGGAAAATGAATATCGGAATGTGTGCTCCACTTGCCTGAGTAGCGACAGAGATTTGTTCTCTTTGAGTAATATTCCGCAAGCATttcaaacatttaaacttttGATGTATGATTTCGCGGGAGATCAACTAGGCGAGCTGCCGAATATATCCCACCTGATTTGCTGGGAGTGTGTGGCCATCATGAGGAGGTTTAACAAGTTTAAATGGCAGGTTCATAATGCACAAGAGCACATACAAGTACTGGCTTTAAGTCAACAGCAAGAGacaATAGATCACACATACATAACACAGTCCCTGTCTTCCCTTGTGATTGAGAGTAAATCCGACTATGATAAGATATTCTTCGACTACACAACTCTGCCGGAGTGTCAGTTCATTATAACAGATGCTATGGATGTGAAGAATGAACAGTATATCACTTTGAAGGATGGCATCGGGTTGGATGTTGAAGAGCATATTTTGGATGTTCCGGAGATGGAGAACTCTGAGACCCAAGTGTATTCTCACGTGGTTTTGGAGTCGGGAGCCCTAATTTCCATGCCGGAGGCTTTGAGACGTGTTAAATGTGAAGCTATGCCGACCTTGACTATAGCCCCAATAACAACATCGAACTTAGAAGCTGGCACGGTGATAATGTCAACCCCGAAAGAGGAGATGGAGCCAAAAGCGGGGTATACCATGGAGTACATGAACCAAGAACAGATGCTGGCTAGTCGAGACGAATTAAAAAAGAAGGTGCCTTACGCAAGCTCGGTGTACAAATGTGAGCTCTGTGCTATTGGATTCTACGCGCAGCAACAAGTTGAGGACCACTTCGAGAGCACGCACCGACCGAAAGCCGGCTTTATAGCTTGCAAAGTATGCTACGTGTATATAGACGAAACCGCTTTGACTTCTCACATCGACCAACACTACATCAAGTACACGTGTCGGCTGTGCGACCACACGGAGTACAGTCAGCGGCTAATGGAGATGCACACGGAGTCGCATCTCAATAAGCCTACTCCGAATGCCGTTATCAAGATCGAAGGAACTGAGACTAAGAAGagaaaaaagaaaaaaggtgCAGCGAGTAAAGCCGAGCCAATAAAGCCAGGGGACTTACGGAAACTGCTCTCCAAAACAACTATAGAGGGTTACAAGTGCCTCGAGTGTGATATGTTCTTCAAAAACTCTCGAGCTCGAAAAAACCACGTGGCAAGGTACCACAGAGAAGGCCTTCAGTGCGACCATTGCAAGAAACGATTCGTAAATAGGACAACACTGGCTACGCATTTacgTGAGCCCTCCACTAATGAATGCCCTATCTGCCACAAGCAAGTCCGCTGCATCCAGTTAAAGTACCATAATCatttcacagctggacataggcctcaacTAATAAGTGCCATAGCACACATACAAgTGTTCGCACATCTCGCCACGTACCGCGCCCATCTGAAGTATTCCAGAGCGCACGCTACCGACCACGTGCTCAAATTTCCATGCCCTATGTGCAATAAGGGATACCCGACTAAAGAGGCGATGCAGGACCACTTCAATTACCAACATCTCGGGAAAACTTCGCATAAGTGCCCTGTTTGTAATAAGCCAATAGCATCACGAGCGAACGTCGAGAAGCATATATCTCGGGTTCATGGTGAGAAGAAACCCAAAGCAAGGAACCATCAGTGCCAGACTTGCGGAAAGAGTTTTACGGACAAGAAAGCCTTGACTCAACATGAAGTGATACATTCTGGTCTTCGCCCCCTGTCCTGTGAAATTTGCCATCAGACGTTCAAGCAAAAAGCATCTCTATACACACACAAGAAACGAGTTCATAAAGTTTATCCCGTGAAGAAACAAGTGCATTATATGGACGAAATGCCTACGTAG
Protein Sequence: MEQDVENEYRNVCSTCLSSDRDLFSLSNIPQAFQTFKLLMYDFAGDQLGELPNISHLICWECVAIMRRFNKFKWQVHNAQEHIQVLALSQQQETIDHTYITQSLSSLVIESKSDYDKIFFDYTTLPECQFIITDAMDVKNEQYITLKDGIGLDVEEHILDVPEMENSETQVYSHVVLESGALISMPEALRRVKCEAMPTLTIAPITTSNLEAGTVIMSTPKEEMEPKAGYTMEYMNQEQMLASRDELKKKVPYASSVYKCELCAIGFYAQQQVEDHFESTHRPKAGFIACKVCYVYIDETALTSHIDQHYIKYTCRLCDHTEYSQRLMEMHTESHLNKPTPNAVIKIEGTETKKRKKKKGAASKAEPIKPGDLRKLLSKTTIEGYKCLECDMFFKNSRARKNHVARYHREGLQCDHCKKRFVNRTTLATHLREPSTNECPICHKQVRCIQLKYHNHFTAGHRPQLISAIAHIQVFAHLATYRAHLKYSRAHATDHVLKFPCPMCNKGYPTKEAMQDHFNYQHLGKTSHKCPVCNKPIASRANVEKHISRVHGEKKPKARNHQCQTCGKSFTDKKALTQHEVIHSGLRPLSCEICHQTFKQKASLYTHKKRVHKVYPVKKQVHYMDEMPT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00704393;
90% Identity: -
80% Identity: -