Basic Information

Insect: Eupithecia tripunctaria
Gene Symbol: -
Assembly: GCA_955876795.1
Location: OY041629.1:2815755-2819940[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.00016 0.014 16.8 1.6 1 23 83 106 83 106 0.97

2 16 0.012 1 10.8 0.5 2 23 129 151 128 151 0.93

3 16 0.18 15 7.2 0.5 1 23 173 196 173 196 0.94

4 16 0.0003 0.025 15.9 0.2 1 23 200 222 200 222 0.96

5 16 0.42 36 6.0 0.1 1 23 227 250 227 250 0.94

6 16 7.4 6.3e+02 2.1 1.0 2 21 258 277 258 280 0.83

7 16 8.3e-06 0.00071 20.8 0.7 1 23 287 310 287 310 0.97

8 16 3.2e-05 0.0027 19.0 0.2 1 23 316 340 316 340 0.98

9 16 8.5e-06 0.00073 20.7 0.6 1 23 346 368 346 368 0.99

10 16 0.02 1.7 10.2 0.4 2 23 511 532 510 532 0.97

11 16 0.0099 0.84 11.1 0.3 1 23 536 558 536 558 0.98

12 16 0.00046 0.039 15.3 0.6 1 23 563 586 563 586 0.92

13 16 0.035 3 9.4 2.8 2 23 593 615 592 615 0.95

14 16 0.0097 0.83 11.1 0.3 1 23 622 645 622 645 0.93

15 16 0.00082 0.069 14.5 3.5 1 23 649 671 649 671 0.95

16 16 0.00071 0.06 14.7 3.5 1 23 676 699 676 699 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.00016	0.014	16.8	1.6	1	23	83	106	83	106	0.97
2	16	0.012	1	10.8	0.5	2	23	129	151	128	151	0.93
3	16	0.18	15	7.2	0.5	1	23	173	196	173	196	0.94
4	16	0.0003	0.025	15.9	0.2	1	23	200	222	200	222	0.96
5	16	0.42	36	6.0	0.1	1	23	227	250	227	250	0.94
6	16	7.4	6.3e+02	2.1	1.0	2	21	258	277	258	280	0.83
7	16	8.3e-06	0.00071	20.8	0.7	1	23	287	310	287	310	0.97
8	16	3.2e-05	0.0027	19.0	0.2	1	23	316	340	316	340	0.98
9	16	8.5e-06	0.00073	20.7	0.6	1	23	346	368	346	368	0.99
10	16	0.02	1.7	10.2	0.4	2	23	511	532	510	532	0.97
11	16	0.0099	0.84	11.1	0.3	1	23	536	558	536	558	0.98
12	16	0.00046	0.039	15.3	0.6	1	23	563	586	563	586	0.92
13	16	0.035	3	9.4	2.8	2	23	593	615	592	615	0.95
14	16	0.0097	0.83	11.1	0.3	1	23	622	645	622	645	0.93
15	16	0.00082	0.069	14.5	3.5	1	23	649	671	649	671	0.95
16	16	0.00071	0.06	14.7	3.5	1	23	676	699	676	699	0.96

Sequence Information

Coding Sequence: ATGACCTGTAACTACAGTCTAGTCCACAATAATTACCAGTTACTACAGACTAAAGTAATGACCTGTGACTACCGGCTAGTCTACAGTAATAACCTGTTGTTACTACAGACTAGTAAGAAGCCAGAACCAGATACTGGGATGGAGACGACACTCAAAGAGCATGTCGTACTTCTAACGAAACATAGAGAGAATTTGTTCAGTGTGCTCGCTTACTCCAACGCAACGCCCATCGGAAGTAACAGCGGGTTCGCTTGCTGCTTTTGTCCAAAACAGTACCGAGACGCGGCAGAACTAAAAAATCACACGCGCACAGAACATACGCCGGAAAAATACAAGATCAAGCAAGTTCGATCGCACTGCGTTAAGCTGGATATAACTGAACTGATATGCACCATCTGTCATAAAGATATAGAAGATTTAGAATCCTTGATGAGACATTTGAAGTTTATACACGAGAAAAATATGCATTACGATATCAAAAACCATCTAATACCGTTTAGGTTTGACGACAGTGAATTTAAATGTATCAAATGCGGGCGgattttcgatttttttaaacctttatCGGAGCATATGAACGATGTGCACTTTAGGAACTATGAGTGCGATAAGTGTACGAGAGGATTTGTAAATAAAGGGACGTTGGCAACACACGCGTTGCAACACAATACTGGCAGTTTTCCCTGCGAATTCTGCGCTAAAGTCTACGCAAGTAAAGTCAGAAGATACGAACACGTCCGTGTAGCGCATAAGATGAAAAGCAAAGGACGAAAATGCTTCTTCTGCGAGGAGAGATTCATAGATTCAACGAGGAAACTAAAACACGAGATTGAGCAGCACGGCGTACCACAAAAGCTGTACGACTGCAAAGCTTGCGGCAAATCATTCCCCATCAAACGTAACTTGCAGCGTCATATACAAATGAAACATTTACTGCATCGTCCGTATAAATGTGGAATAGACGAATGCGATAAAGCATTCTACATGAACTCGCAGTTGGCAACACATTTACTAACGCATGGTAAAGTGAAGCCTTATAAATGTGATCTATGCCCTAAAACTTACAAGTCTAAGGCAACGCTTGCAATCCATTTGTACACGCATAGTGACACAAGAGAGTTTCAATGCAGGATATATAAAGAAGAAGATTTCATTACTCTCGACGAGCCAGCCCTGTTCGCGGCAGAAATGAGGATTCTTCTACAACACTTCAACTTCACTCCGTTCAGAAACCGCTCCACTTTCTTCACCTGCTTTTACTGCATCGAACGTTGCGTGTTCGGCTCCCCTGAAGACATGAGGACACACACTAGGCTCTATCATTCAGACCAGCCAAACGAGATAGAAATAGCTCTCCGCCCGCACTGGAACAACGAACTTATCAAAGTAGACATCCACGACCTAAAATGCATCGTCTGCGACCTTGATATCAATGACTGGGGCACAATCTATACGCATCTAGAAGAAGACCACGAGGTAACTATAACTTGCAAAAATAAACTGGTCCCGTTCGACTTGTCTACAGACAACAAATGCGTTCTGTGTCCGGATAGCTTTTCTTCCATCACGCAACTCGATTCGCATATGAACAAGCATTATCCGAACTACATATGCGGCAGTTGCGGCGAACGATTCGCGACCGTAGCTAGATACAGATCGCACGAGAAAACCCACAAGACAGGAAAATTTCCGTGCAAAATCTGTAACAAAGTCTTCGCGCTAAATAAATACATGACGAAGCATGTAGCATTGAAGCACATGAAGGTAAAGACTGTCAAATGTCGTTATTGTGAGGAAGCTTTCACGTCGGAGCATCACAGGCAAACTCATGTAGCCAAAGAACACAACAAGCATGTACAAATATACACGTGCGAAGTGTGCGGCGAATCTTTCGACTGGGATCGGGCCTTTGCCAGACATATGACGCGCAAACACAGTACGCAGTTTTATTGCAAATTATGCGCAAAGTCGTTCACTTCGAGCAAATCATTGGAGCACCATAATACTATACACAACGGTGATAGTTTCGAGTGTCCGGTATGCCAGAGATGTTACTCTTCTTTTAACACCCTGAAGAGTCATGTTAGGTTTTCGCATAAGAATCAACCTAAGAGTGTGAAGGGGTTATTTGGTCTCCCGTGA
Protein Sequence: MTCNYSLVHNNYQLLQTKVMTCDYRLVYSNNLLLLQTSKKPEPDTGMETTLKEHVVLLTKHRENLFSVLAYSNATPIGSNSGFACCFCPKQYRDAAELKNHTRTEHTPEKYKIKQVRSHCVKLDITELICTICHKDIEDLESLMRHLKFIHEKNMHYDIKNHLIPFRFDDSEFKCIKCGRIFDFFKPLSEHMNDVHFRNYECDKCTRGFVNKGTLATHALQHNTGSFPCEFCAKVYASKVRRYEHVRVAHKMKSKGRKCFFCEERFIDSTRKLKHEIEQHGVPQKLYDCKACGKSFPIKRNLQRHIQMKHLLHRPYKCGIDECDKAFYMNSQLATHLLTHGKVKPYKCDLCPKTYKSKATLAIHLYTHSDTREFQCRIYKEEDFITLDEPALFAAEMRILLQHFNFTPFRNRSTFFTCFYCIERCVFGSPEDMRTHTRLYHSDQPNEIEIALRPHWNNELIKVDIHDLKCIVCDLDINDWGTIYTHLEEDHEVTITCKNKLVPFDLSTDNKCVLCPDSFSSITQLDSHMNKHYPNYICGSCGERFATVARYRSHEKTHKTGKFPCKICNKVFALNKYMTKHVALKHMKVKTVKCRYCEEAFTSEHHRQTHVAKEHNKHVQIYTCEVCGESFDWDRAFARHMTRKHSTQFYCKLCAKSFTSSKSLEHHNTIHNGDSFECPVCQRCYSSFNTLKSHVRFSHKNQPKSVKGLFGLP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -