Basic Information

Insect: Eupithecia tripunctaria
Gene Symbol: -
Assembly: GCA_955876795.1
Location: OY041614.1:2770838-2776611[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 3.8e-06 0.00033 21.8 1.7 1 23 246 268 246 268 0.98

2 9 3.7e-08 3.1e-06 28.2 1.6 3 23 276 296 274 296 0.98

3 9 0.00012 0.011 17.1 0.3 1 23 302 324 302 324 0.98

4 9 1.3e-05 0.0011 20.1 1.7 1 23 330 352 330 352 0.99

5 9 2.8e-05 0.0023 19.1 1.7 2 23 486 507 485 507 0.96

6 9 3.6e-09 3e-07 31.4 1.6 1 23 513 535 513 535 0.98

7 9 0.003 0.26 12.7 0.6 3 23 543 563 541 563 0.97

8 9 0.00018 0.015 16.6 0.8 1 23 569 591 569 591 0.99

9 9 0.024 2 9.9 0.8 1 23 597 621 597 621 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	3.8e-06	0.00033	21.8	1.7	1	23	246	268	246	268	0.98
2	9	3.7e-08	3.1e-06	28.2	1.6	3	23	276	296	274	296	0.98
3	9	0.00012	0.011	17.1	0.3	1	23	302	324	302	324	0.98
4	9	1.3e-05	0.0011	20.1	1.7	1	23	330	352	330	352	0.99
5	9	2.8e-05	0.0023	19.1	1.7	2	23	486	507	485	507	0.96
6	9	3.6e-09	3e-07	31.4	1.6	1	23	513	535	513	535	0.98
7	9	0.003	0.26	12.7	0.6	3	23	543	563	541	563	0.97
8	9	0.00018	0.015	16.6	0.8	1	23	569	591	569	591	0.99
9	9	0.024	2	9.9	0.8	1	23	597	621	597	621	0.95

Sequence Information

Coding Sequence: ATGGTCTTATCGCAGACGGGCTTTGATTCCTCACACGGACAATCAAGCTTTGGAAAATTTGGGCGCAAACGGATCAGAAAACAATACCTAGCTTTTCATACGTCAACACCGTATGTGCTATACAAAGATGGTGTGGAGCGCGCGCCCCCAGGCACGCAGTGGGGCGGCGCGGTGCTCGACGGCGGCTACCAGCCCATGCAGCACCAGAGCCCGAGCGGGCCCTCGCCGCAACCCGAGCCACAGCTGGCGTCCCCAGCGCCCTCACCCTACCCGCCACCGCCATCCCAGGACCAGACTGGGGCGGACGAAGCGCAACAACTAGCTCAGCAACAAGCGCAACAACAGGCACAACAACAAGTGCAGCAGCAAGTCCAACAACAAGTTCAACAgcaacaacaacaacagcaAACCTCCCCCGAGCACATGACGGTCGAGCAACAGCTCCAGAACCAACCGCCTCAGAGCCAGGACCACCTGGACAGAACCCCCTGCTTCGTCCCACAAGCAGATTTACAGCAGCAGTACACTCCGTACTTCAAGGAAACGAGGCCAACGGGACACATGCTCGGGACCGGAGGGTTCCCACTGCATTACCTCAAACAGAACGGCGGCGTGCTGTCGCTCGAGGCTCCGCTAGACCAGTACGCGACGCCCGACCTGCGACACTTGCCCGATATCGTGCAGCCGGAACCGGCCAAGCCACGAAAGCACAATCCGAACGCAGAGCTGCGCCTGTTCAAATGCCTGACGTGCGGCAAAGACTTCAAGCAGAAGTCGACGTTGCTGCAGCACGAGCGTATTCACACGGACTCGCGGCCGTACGGCTGCCCCGAGTGCGGCAAGCGGTTCCGGCAGCAGTCGCACCTCACGCAGCACCTGCGCATCCATGCCAACGAGAAGCCCTACGCCTGCGTCTACTGCCCGCGCTCCTTCCGCCAGCGCGCGATCCTCAACCAGCACCTGCGCATCCATTCCGGTGAGAAGCCATATACGTGCGGCGAGTGCGGCAAACATTTCCGCCAGAAGGCCATCCTGAACCAGCACGTCCGCACACACCAAGGCGAGCGCTATTCACACATATATGCCCCACCCCGCGGGGCGCGCGCGGCGCCGCCGCtcgccgccggcgccgcccgcgccccaaGCCGCCCCCCGCACGACGTTTCGCCGCACCTGATCTTCAAGAACGGGACGACGCCGACGCTGTGGCCGCAGGACGTGCCCTACCCGCCGGACGAGAACAAGGAGGAGATCCTCTCGCAGTACGGCGACGAGAACGGCGAGCAGCGCGGCACATGCTTCTCTCCGGGCGACGTAGCGCAGTACCCTGCCTACTTCAAGGACACCAAGGGGCTGAACCACGGCGTGTTCCCGGGCGGGCTCAGCCTGCAGTACCTCAAGGGCGGCAAGCTGCCCGACGTGCTGGGTGGTGCGCGCGCCATGCCACTCTATGTGCGCTGCCCCATCTGCCAGAAGGAGTTCAAGCAGAAGTCCACGCTGCTGCAGCACGGCTGCATCCACATCGAGTCGCGCCCCTACCCCTGCCCCGAGTGCGGTAAGCGATTCCGCCAGCAGTCGCATCTCACGCAGCACCTGCGCATCCACACCAACGAAAAGCCCTACGGCTGCGTCTACTGCCCGCGCTTCTTCAGACAGCGCACGATCCTCAATCAGCACTTGCGGATCCACACCGGCGAGAAGCCGTACAAGTGTGCGCAGTGCGGCAAAGACTTCCGCCAGAAGGCGATCCTGGACCAGCACACGCGCACGCATCAGGGCGACCGCCCCTTCTGCTGCCCCATGCCGAACTGCCGGCGGCGCTTCGCCACGGAGCCCGAGGTGAAGAAGCACATCGACAACCACATGAACCCACACGCGGCGAAGGCGAGACGCGCGGACGGGAAAGCGACGCCGCGGCCGCTGCCGCCGGCCTCGGCCGTGGTGAAGCCTGAGCTGTACTTCCCGCAGTGCTACGCGCCGCCCTTCCAGCAGTTCCCGGCGGGCGCGGAGTTCAAGCCGAGCGTGGGGGGCGCCTGCTTGCCGGCGCAGTGA
Protein Sequence: MVLSQTGFDSSHGQSSFGKFGRKRIRKQYLAFHTSTPYVLYKDGVERAPPGTQWGGAVLDGGYQPMQHQSPSGPSPQPEPQLASPAPSPYPPPPSQDQTGADEAQQLAQQQAQQQAQQQVQQQVQQQVQQQQQQQQTSPEHMTVEQQLQNQPPQSQDHLDRTPCFVPQADLQQQYTPYFKETRPTGHMLGTGGFPLHYLKQNGGVLSLEAPLDQYATPDLRHLPDIVQPEPAKPRKHNPNAELRLFKCLTCGKDFKQKSTLLQHERIHTDSRPYGCPECGKRFRQQSHLTQHLRIHANEKPYACVYCPRSFRQRAILNQHLRIHSGEKPYTCGECGKHFRQKAILNQHVRTHQGERYSHIYAPPRGARAAPPLAAGAARAPSRPPHDVSPHLIFKNGTTPTLWPQDVPYPPDENKEEILSQYGDENGEQRGTCFSPGDVAQYPAYFKDTKGLNHGVFPGGLSLQYLKGGKLPDVLGGARAMPLYVRCPICQKEFKQKSTLLQHGCIHIESRPYPCPECGKRFRQQSHLTQHLRIHTNEKPYGCVYCPRFFRQRTILNQHLRIHTGEKPYKCAQCGKDFRQKAILDQHTRTHQGDRPFCCPMPNCRRRFATEPEVKKHIDNHMNPHAAKARRADGKATPRPLPPASAVVKPELYFPQCYAPPFQQFPAGAEFKPSVGGACLPAQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00772240;
90% Identity: iTF_00377335;
80% Identity: -