Basic Information

Insect: Eupithecia tripunctaria
Gene Symbol: -
Assembly: GCA_955876795.1
Location: OY041612.1:8246646-8251304[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0029 0.25 12.8 3.1 1 23 166 188 166 188 0.98

2 11 3.6e-05 0.0031 18.8 0.2 2 23 198 219 197 219 0.98

3 11 4e-06 0.00034 21.8 2.5 2 23 227 248 226 248 0.93

4 11 0.00023 0.02 16.2 1.2 1 23 254 276 254 276 0.98

5 11 6.3e-05 0.0054 18.0 0.8 1 23 282 304 282 304 0.96

6 11 2.6e-05 0.0023 19.2 3.8 3 23 312 332 310 332 0.95

7 11 0.00042 0.035 15.4 0.3 1 23 338 360 338 360 0.97

8 11 8.1e-07 6.9e-05 24.0 1.8 1 23 366 388 366 388 0.99

9 11 8.9e-05 0.0076 17.5 3.8 1 23 394 416 394 416 0.98

10 11 0.00014 0.012 16.9 0.2 1 23 422 444 422 444 0.95

11 11 5.7e-05 0.0048 18.2 1.5 1 23 450 472 450 472 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0029	0.25	12.8	3.1	1	23	166	188	166	188	0.98
2	11	3.6e-05	0.0031	18.8	0.2	2	23	198	219	197	219	0.98
3	11	4e-06	0.00034	21.8	2.5	2	23	227	248	226	248	0.93
4	11	0.00023	0.02	16.2	1.2	1	23	254	276	254	276	0.98
5	11	6.3e-05	0.0054	18.0	0.8	1	23	282	304	282	304	0.96
6	11	2.6e-05	0.0023	19.2	3.8	3	23	312	332	310	332	0.95
7	11	0.00042	0.035	15.4	0.3	1	23	338	360	338	360	0.97
8	11	8.1e-07	6.9e-05	24.0	1.8	1	23	366	388	366	388	0.99
9	11	8.9e-05	0.0076	17.5	3.8	1	23	394	416	394	416	0.98
10	11	0.00014	0.012	16.9	0.2	1	23	422	444	422	444	0.95
11	11	5.7e-05	0.0048	18.2	1.5	1	23	450	472	450	472	0.96

Sequence Information

Coding Sequence: atgacgAGCATATTACTACGAAAAAACCTTCAAGATTGCTGCCGAACATGTTTAAATAATCTATCAAATAAAATGCATGGTATATTTGAGAAAAAGGAAGATACTCCAACTGTAGCTGAAATCTtgtctttgtttacaaacattgatATCCAACTTGATGATGTGTTACCTAAAAATTTGTGTAGTAGTTGTTATAACTGTCTTATTAGCTTCTACGACTACAAGAAACTAGCAGAGAAAGTAGATGTACAACTTCATCAATACTACGATAACATTATATCCAAGCCAAAAGATGATTTCTCAGATATATCTATTAAAGTAGAGAACATCTGTGATTCAAATGAATATGAATTTCCGGAGTTTGAATTAGAAGATTTATTAGAAGATTCTGACGCTAGTGAGAATTGTCCGCTTAGCAATATTCTGGGCTCTTCCtctgaatataattcaaaaactAGTAAAGTGTTAAAAAAACCGAAGCATTTGAAGAATTCATTTAAATGTATGCAATGCCCAAAGTCATTTAGAGAGCACCTAAAATTTGAGAAGCATCTTGAGATTCACGAGAGTGACAATGCATCAGGCCCTGTTCAGTGTGAAGTTTGCTCATCAACATTCCGTTCTGCAAACTCTTTGTCTGCTCATATGCGAATACATGTACCTAAAGGCAGAGTTCTATCCTGCCAGTACTGTGGCAAAGTTTTCAAAAAACTCAGTCACTTAAAACGGCATGAAGGATCCcatcttataaataaaacacacaaatGTCCAAAATGCCCAAAGGCATACCATTTAGAGAGTGCTTTGGCAGATCACATGCTTAAACACAATGGAATAAAGCCTCATGCATGTCCAATATGCCCAAAAAGTTTTGCACACTTGTCTATTCTGAGCAATCACATTAGATTGCATACTCGGGGCAAAGCACATTTATGTCAGACTTGTGGAAAACGGTTTGATTCAAGTACAAATTTAAAACAACATGTTAAGAGGCATGCTGGGTTAAAACAGTTTGCTTGTAGCTACTGCCCTGGAAAGTATGTTAGTAAAGGAGAAATGCAGAGGCACGAAAGAACCCACTTAGGTTTAAAGGCATACAAATGTGAACGTTGCGACTCCGCCTTTACAACAAATAGTACGCTGAAGATTCACATGCGTAAACATCTTAATGTTAGGGCGTATCAGTGTGACACATGCCCTATGAAgttTACACGCAAAGAACAGCTAATAACTCATTGCCGTACGCATACGGGAGAAAAGCCATTTCTATGTGATTTGTGTGAACGGGCGTTTGCACAAAGCGGTGACTTGCTTAAACACAAGAGGGCGCATCTTGGTGTCAATATGTATAAATGTGACCAATGCTCAGAGAGCTTCAGACTGAAATCAATGCTACGACAACATTTGTCAGACCACTATGTGTCTGCCAAGAAGTTGGAGGAAAAAAACAAGGATAATATAGTCGATAATAAAGATACTGTTAGTGTCGAAAGTTGA
Protein Sequence: MTSILLRKNLQDCCRTCLNNLSNKMHGIFEKKEDTPTVAEILSLFTNIDIQLDDVLPKNLCSSCYNCLISFYDYKKLAEKVDVQLHQYYDNIISKPKDDFSDISIKVENICDSNEYEFPEFELEDLLEDSDASENCPLSNILGSSSEYNSKTSKVLKKPKHLKNSFKCMQCPKSFREHLKFEKHLEIHESDNASGPVQCEVCSSTFRSANSLSAHMRIHVPKGRVLSCQYCGKVFKKLSHLKRHEGSHLINKTHKCPKCPKAYHLESALADHMLKHNGIKPHACPICPKSFAHLSILSNHIRLHTRGKAHLCQTCGKRFDSSTNLKQHVKRHAGLKQFACSYCPGKYVSKGEMQRHERTHLGLKAYKCERCDSAFTTNSTLKIHMRKHLNVRAYQCDTCPMKFTRKEQLITHCRTHTGEKPFLCDLCERAFAQSGDLLKHKRAHLGVNMYKCDQCSESFRLKSMLRQHLSDHYVSAKKLEEKNKDNIVDNKDTVSVES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00696676;
90% Identity: iTF_00703263;
80% Identity: -