Etri001507.1
Basic Information
- Insect
- Eupithecia tripunctaria
- Gene Symbol
- -
- Assembly
- GCA_955876795.1
- Location
- CATPCX010000016.1:548651-548953[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.1e-08 1.9e-05 25.1 0.1 2 40 10 49 9 54 0.92
Sequence Information
- Coding Sequence
- ATGCCTCCTAAGCGAGCATTGTGGTCACAAGATGACCTGGTCTCAGCTGTTCGCGTAGTACAGAGAGGAATAATGAGTTCGTATGCGGCTGCAGGAAGATACAAAGTTCCTAGAAGAACcataaagaaagaaaggaaaGGAAGAAAGGAAAGAGAGGGAACTctgaaaattcaaaaattaaaaaaactgaaaaagcaAATAAACGAAAGTCATCTTGCGGATCTACGAAAACCAAGGACGCTGCAGATACTCAAGAGAGTTGGTACTGTCATGTCTGTGAAGAAAACCATAAGAATGACATGA
- Protein Sequence
- MPPKRALWSQDDLVSAVRVVQRGIMSSYAAAGRYKVPRRTIKKERKGRKEREGTLKIQKLKKLKKQINESHLADLRKPRTLQILKRVGTVMSVKKTIRMT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00704933; iTF_00704934; iTF_00704935; iTF_00704936; iTF_00704906;
- 90% Identity
- iTF_00704933; iTF_00704934; iTF_00704935; iTF_00704936; iTF_00704906;
- 80% Identity
- iTF_00704933; iTF_00704934;