Etri010229.1
Basic Information
- Insect
- Eupithecia tripunctaria
- Gene Symbol
- -
- Assembly
- GCA_955876795.1
- Location
- OY041605.1:8890910-8896165[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.3e-09 3.1e-06 27.7 0.1 2 41 16 55 15 59 0.87
Sequence Information
- Coding Sequence
- ATGGTCAgcaactacaaaagaaaaacgGATAAAGCGTCCTATTCAAAGGAAACGCTAAAAGAAGCAGTAAGATCTGTCAGAAATGGTGTCCTGAGTGGCTATAAGGCTGCACAAACATATAAGATTCCTAGAATGACTATTATGGATCACGTCAAAAATAAAAGGACTAAATCAGAGTCATTGGGAAGAAACACGGCATTGTCATTAGAAGTAGAAAAGAAGTTAGCTTCAAATCTTCACCAAATGGAAAAGCATGGCTTTGGATTAAGTAAAGCAGAAACATTAGAAATGGTGGCAGAATTTGTTCAAAAAAATGGAGTAGAGACGCCATTTAAAAATGGAAAACCAGGTGATGCGTGGTTCTCTGCGTTCAAAAAGCGACATAATTTGTCAGTGAAAAAACCTCAAGCGGTTGAATACGCCAGAAAGAAGGCTATAGATCCTTTTATTGTTTACCCATACTTCGATTTACTTGAAAAAACAATTAATGATCTGAATCTATCGGAAAAGCCTTTTGCGATTTGGAATCTGGATGAGACAAGTTTCTCTAAAGATCCAGAAAAAACTAAGATCGTTGGACTAAGAGGACACGCGGCTACTAGAGTCATTTCCTCGCCAGGAAAAGATAATACCACAGTTTTACTTGGAATTAACGCGCTTGGAGAAAAACTACCTCCGCTGATCATTTTGAAAGGCAAACATATGTGGGACGAGTGGACATCTCCAGAAGCCTATCTAGGCACAACTTATGCCGCGACAaagaatggatggatggaaagcGACGTATTTGAGATGTACTTCAAAAAAGTTTTTCTGCCAGCTGTTGGGAATGAACGTCCAGTTCTGCTTATATATGATGGCCACGCGACCCATGTAGGACTAAATATAATAGAAGAAGCTCGCAACTCAGATATTACAATATTGAAATTACCAGCACATACCAGTCACGTTCTGCAACCGCTTGACGTAGCAGTTATGAAATCATTTAAAGATCGTTGGGATCAACTACTGGTGAAATGGCAGCGCTTGAATGTTGGGGTTGCATTGTCAAAAAAAGAGTTTGCTAGGCTAATCGGAGAAGTTTGGACACAAATCGACAGTCAGGTTGTAAGAAATGGCTTTCGCAAAACAGGAATTTATCCTGTCAATCCTAAAGCTGTTGAAGAAAAGCTATTCGACGCGTTGAAGCTTGAACACTGGAAAAAATTTAAAGTTGAGTCACAAGACAAAGCCAAACAAGCTACGAACAGTCTTTCAGAAGAGATTCCTATTTGTGATGACGAAATTGACAACTCTTCGAGTAAAAGCAACCCAAAAGCTCTATTTTCATTAGCACTTAATTGCATTATAAAAGTAGCGCACAAAGAAACTTGTAAAGAGCACTTAGATAAATGTAGAACGGAATATACTTTTTTGAGTAATAACAATGTTACACAGAACACCCCTTCTAGCAGTTTTCTTTCTGTGAGTAATGTTCATAGCCCAAACAAACAGAatgaaactgaactgaaaaataaaaatcttataaaacTTCCGGTACATGAAGGTAAAAAGATTCAAGTGCTAGAAGACAAATATGTCACTTTTGAAGAACTTCTCCTCATGAAAGTAAAAGCTGGCAACAATAATAAACCTAAGCGACAAAGAATGGGACCAGGAGCTGAAGTCATAACTCATGACGATGTTCTTATGCGTAAAATGgaagaaaataagaaaaaacctAAGGATTCAAagacacaaaaaactaaaaaatctaTGGAACCAAGTCCGTCAACTTCAGTACAGAAGCCTGCTGGCAAACAACAAGAACATCAGACAAGAAAATCTCAAAAGCAAAATCGAACACATGTGGTTTCAGATGACTCTACAAGTGTTTCGGATTGCATAAGTGAATACAGTGATTATACTTGTGACAGTGAAAATGATTTTGAAGAATACATGTTCACCccagaaaaaaaattgacaacGCAAAAAGACAAAAGTAAATCGAAAACAGTACAAGTGAAATCTGAGAGAGTTTTCAGCAATCTAGTCAAAGAGAGtgcaaaacaaaattttaatggAAAAGAAAACTGTAAGAATGGAACCAATTCAAATAACCCCTTGGGCAGCACCTCGGCTGCAGTCGAGTCGAGCTGGACTCCCGCCGTGCCAGTTAGAGCTAATGGCCAACAACACGACAACGGCGACAAAGAAAACGGCTGCGACTACCTCTGA
- Protein Sequence
- MVSNYKRKTDKASYSKETLKEAVRSVRNGVLSGYKAAQTYKIPRMTIMDHVKNKRTKSESLGRNTALSLEVEKKLASNLHQMEKHGFGLSKAETLEMVAEFVQKNGVETPFKNGKPGDAWFSAFKKRHNLSVKKPQAVEYARKKAIDPFIVYPYFDLLEKTINDLNLSEKPFAIWNLDETSFSKDPEKTKIVGLRGHAATRVISSPGKDNTTVLLGINALGEKLPPLIILKGKHMWDEWTSPEAYLGTTYAATKNGWMESDVFEMYFKKVFLPAVGNERPVLLIYDGHATHVGLNIIEEARNSDITILKLPAHTSHVLQPLDVAVMKSFKDRWDQLLVKWQRLNVGVALSKKEFARLIGEVWTQIDSQVVRNGFRKTGIYPVNPKAVEEKLFDALKLEHWKKFKVESQDKAKQATNSLSEEIPICDDEIDNSSSKSNPKALFSLALNCIIKVAHKETCKEHLDKCRTEYTFLSNNNVTQNTPSSSFLSVSNVHSPNKQNETELKNKNLIKLPVHEGKKIQVLEDKYVTFEELLLMKVKAGNNNKPKRQRMGPGAEVITHDDVLMRKMEENKKKPKDSKTQKTKKSMEPSPSTSVQKPAGKQQEHQTRKSQKQNRTHVVSDDSTSVSDCISEYSDYTCDSENDFEEYMFTPEKKLTTQKDKSKSKTVQVKSERVFSNLVKESAKQNFNGKENCKNGTNSNNPLGSTSAAVESSWTPAVPVRANGQQHDNGDKENGCDYL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01182715; iTF_01182716;
- 90% Identity
- iTF_01182715;
- 80% Identity
- -