Etri000598.1
Basic Information
- Insect
- Eupithecia tripunctaria
- Gene Symbol
- -
- Assembly
- GCA_955876795.1
- Location
- CATPCX010000004.1:673693-674301[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.1e-11 1.2e-08 35.5 0.0 1 40 18 57 18 60 0.93
Sequence Information
- Coding Sequence
- ATGCCTCGGCAAAGTGTTTTGTCCCCACCTGCGAAGAAAAGGAAAACTTGGGATCCTGAGCAAATGAAAAAAGCTGTTGAAGCCGTAAGATCTAAGGTCATGGGTTATAAAAAGGCAGTAAAAGCATTTTCTGTGCCTAGAACTACACTGAAAAGGCTCGTAAAGGACTCGGAAGAATCCGTTGATCTACTTGTAAATAAGCGGCTTGGTAGAAAACCGATACTTCCACCTGACTTGGAAAAGAAGTTAGTTGAATATATTTTCTTCGCGCGTCGCGGACGTGGTCGCGGACGTGGACGCGGTGTCCGACGCAGTCATGATGGTGCAAGTTGCAGCGGCAGCAGTGCTCAACAATCCCTTAGAGATGTTACACCCAGTAGTAGCTCCGAAAGTGAACAATATCGAGAAAGTGATTCTGACAATGAAGAAATTATCAGAACAGCTCGAATACCTGATACCATAGACACGCCCTGCATATTTTGTGACGCGAATTATTCTAGCGATGAACGTGGAGAAGAGTGGATTCAGTGCCTGAGCTGCAATTTATGGGCTCACACTGACTGTGCAGGTCCTGAAGGCCAATATTACATCTGCGATTTCTGTCGATAA
- Protein Sequence
- MPRQSVLSPPAKKRKTWDPEQMKKAVEAVRSKVMGYKKAVKAFSVPRTTLKRLVKDSEESVDLLVNKRLGRKPILPPDLEKKLVEYIFFARRGRGRGRGRGVRRSHDGASCSGSSAQQSLRDVTPSSSSESEQYRESDSDNEEIIRTARIPDTIDTPCIFCDANYSSDERGEEWIQCLSCNLWAHTDCAGPEGQYYICDFCR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00704930; iTF_00704899; iTF_00704900; iTF_00704901;
- 90% Identity
- iTF_00704899; iTF_00704900; iTF_00704901; iTF_00704930;
- 80% Identity
- iTF_00704899; iTF_00704900; iTF_00704901;