Etri010439.1
Basic Information
- Insect
- Eupithecia tripunctaria
- Gene Symbol
- -
- Assembly
- GCA_955876795.1
- Location
- OY041605.1:11746542-11750067[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.00024 0.091 13.4 0.1 3 24 20 40 18 41 0.91 2 2 1.3e-11 5.1e-09 36.6 0.0 4 42 40 77 39 79 0.95
Sequence Information
- Coding Sequence
- ATGCCACGAAAACGTCCGAAAACGCTTGGAGGTCGCCCATATGTGACTTATACTACAGCACAATTGGAAAAAGCTATAGAGGCTGTCAAACAAGGCTTATCACTAAGAAAAGCATCACAATTGGAAAAAGCTATAGAGGCTGTCAAACAAGGCTTATCACTAAGAAAAGCATGTGAAAAATTTGGAGTACCTAGAGCCACAGTAAACCGACATATCAGAGGCAAAAACACCGGAAAGTATGGACGCCCACAGGTGTTTTCAGAACCAGACGAAGCTACACTTGTCCAGTGTATTAGCTTAGCCGGAGACTGGGGCTTCCCGCTTACGAAGTATGACATCCGTTTGATAGTCAAATCATTCTTGGACCGGAAAGGAGTTACTGAAAAAaggtttaataataattttccaggGCAAGATTGGACCGAATCATTCCTTTCGAGGAATAAAAATGAACTAACATCAAGACTGAGTCAAAATATCAAAAGGGCACGTGCTGCGGTGGATGAAAGTcttataaatgaatattttgACCAACTGAATGATACATTAAAAGACGTCGAGCCAAATCTAATAGTGAATGACGACGAAACCAATTTAACTGATGACCCCAAGCGAAAAAAGGTCATTGTGAGACGAAGTTCTCGACATCCACACAATATAATAGACACCAGTAAATCAAGTACATCGGTGATGTTTGCAGCAGCCGGTGATGGCCATCTACTTCCACCATACGTAGTGTATCGTGCAGAAAACCTCTACAACACATGGGTAAATGGAGGCCCTCCTGGCTCAGTATACAACAGATCAAAAAGTGGATGGTTTACAATGGAAATATTTGAAGATTGGTTTACCAAAATAATTCTGCCCTACTTCAGAAAATTTGATACTGAAAAACCAAAGGTTTTAGTTGGTGACAACTTAGCAAGTCACGTTTCAAAATGGGTGATAGAGCAATGCACtctaaacaatataaaatttgtGTTATTGCCTCCTAACAGTACCGGAATCTGTCAGCCCCTCGATGTGGCTTACTTTAAGCCTCCAAAAACCAAATGGGGCCAGGTATTGTCACAATGGAAATTAAAACACAGAGGCACCATCCCTAAAGATACGTTTCCCAGGCTTCTAAATCAATGCCTCATAGCAATGAGTGACAAGTCAAGCGATAATTTACAAGCTGGGTTCAGAGCTTCAGGATTAATTCCCCTTGATCGAGAGCAAGTTCTTAAAAGGCTTCCAAAGCAAAGTGCTGAAGGCCAAATTGACAATTCACAAGAATGGGTGTCAAGTTTTAAAGAATATCTGCAAGAAACCCGAAAAAAAGAGACGCAACCACTAAAAGCAAAAAAATCAAGGCTTAATTTGCTACCTGGGAAAGGCATTGATGAGTCAATGCTACTTACTAGCACGCAACCAGGTCCAAGTGGACATAAACAGCAAAAAAagaaaagacgtGTGTTGTCTGAATCTGATGATAGCACAATCACTCTGCACGATGAATCGGATGACGGCGGTGATATGTCGCAGTTTCTGCCAAGTGATGtggaagaaaatatatttaccgACGTGAATATTCTAGAAAACTATGATGAAAGTATGGCAgaccattttgaagaaaacattGATCCATTAGCGAACTTATCAGATACAATAGTAAATGAGCCAGAAGTTATTGCAAAGAACTTTCCTACTGGCTCCTTCgttgttgtaaaatttttttACAACAGGGATTCTAAAAAACCAACAGAAAAAAGGTTTGTCGGCACAGTTATTGGCTCGGAAGGAATAGACGGAATCGACGTGAAGTTTATGAGAAAATCCACGAAAACCGAAGATACTTTCGTCTTCCCAGCAGTAGAAGACCTTCAAACCGTGACGCTAGACCAAGTTATTACAGAAATTAAACCTGTGAAAATATCCAGGGGGCGATACGTCTTTGCAAAAGAAGTGAGAGAATACAAGTGCTCGTAa
- Protein Sequence
- MPRKRPKTLGGRPYVTYTTAQLEKAIEAVKQGLSLRKASQLEKAIEAVKQGLSLRKACEKFGVPRATVNRHIRGKNTGKYGRPQVFSEPDEATLVQCISLAGDWGFPLTKYDIRLIVKSFLDRKGVTEKRFNNNFPGQDWTESFLSRNKNELTSRLSQNIKRARAAVDESLINEYFDQLNDTLKDVEPNLIVNDDETNLTDDPKRKKVIVRRSSRHPHNIIDTSKSSTSVMFAAAGDGHLLPPYVVYRAENLYNTWVNGGPPGSVYNRSKSGWFTMEIFEDWFTKIILPYFRKFDTEKPKVLVGDNLASHVSKWVIEQCTLNNIKFVLLPPNSTGICQPLDVAYFKPPKTKWGQVLSQWKLKHRGTIPKDTFPRLLNQCLIAMSDKSSDNLQAGFRASGLIPLDREQVLKRLPKQSAEGQIDNSQEWVSSFKEYLQETRKKETQPLKAKKSRLNLLPGKGIDESMLLTSTQPGPSGHKQQKKKRRVLSESDDSTITLHDESDDGGDMSQFLPSDVEENIFTDVNILENYDESMADHFEENIDPLANLSDTIVNEPEVIAKNFPTGSFVVVKFFYNRDSKKPTEKRFVGTVIGSEGIDGIDVKFMRKSTKTEDTFVFPAVEDLQTVTLDQVITEIKPVKISRGRYVFAKEVREYKCS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01182603;
- 90% Identity
- iTF_00704883;
- 80% Identity
- -