Basic Information

Gene Symbol
ct
Assembly
GCA_955876795.1
Location
OY041620.1:12609721-12636733[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 5.1e-27 5.9e-23 81.6 0.0 3 70 318 386 316 393 0.94
2 3 6e-32 6.8e-28 97.4 0.0 4 77 718 792 716 794 0.96
3 3 8.5e-31 9.7e-27 93.7 0.0 3 75 921 994 919 998 0.95

Sequence Information

Coding Sequence
ATGAGACTGGCTCTTGGAGAACGTCACATATTTTCGCCTCTCGTGTGGTTTCCTCGGTCCCAGCCAACTGTGTCGAACTCCTGCGTGGTCTCGACACGTCTTCACGATACGATCGAGTCGCGGTCGAGCGCGCACCTTGATGCACCAACAATTGATATCGAAGGTCAGCAAATAACAGACCGCAGCTGGCAATCACATAACGACCTTGTTGTAACAGACACAAGGTTCGATTTGCAATTGTGCTATGAATATAGTAGAGCGGATGAAATCGCCCAGCTAGTAGAAGACGTGCGCAGGCTCCAGTCATCGCTTGCAGCGCTGCAGGAGGCGCACGCTCAGCAGCTGCAGCGGCTTGAAGACAGGTTGGATGAGAAGAAACAGCACATCGCTAGGCTGGAGGCGAGGCTGGATGGACAGCGCGACTATGATGATGTCAAGAGAGAGATCAACATGCTCCGCTCACTAGACCTGGGCAGCGAGCGCTCGGATCGGTCCGACCGCCTAGACCATACAGATCGCTCCAATCGCCTAGAGCGCCTAGAGCGCCCCGATCGGCTGGACCGCCCAGATCGGCTAGATCGCCTAGAACGTGAGCGCATAGAGCGCAAGCCCGAACGCTCGCCGAGCGTTGTCCCGAACGAACGAAGCTCTGTCGAGCGCGAACGGAGCGCTGAAAGAAGAGAACCAGGTCCAGAGGAGTGGCCCAGTACGCCTCCGCTCAACAATAACACGACTCACCACAACAACAATGGCCCGACGCCGCTGCCATTGCCGCCGCCGAGCCCCTTCCGCTTCGACGACCACCGTCCCTATCGCTTCGCTGACGACATGGGCCCCTTACCGCCAGGCGCTTTAGTCGGACGACTCGGAGATTCTCTGATCCCGAAAGGAGACCCCATGGAAGCGAGATTGCAAGAGATGCTCCGATACAATATGGATAAATATGCGAACAGTAATCTGGACACTCTGCATATCAGTCGAAGAGTCAGAGAGTTGCTTTCGGTCCACAATATCGGACAGAGATTGTTCGCGAAGTATGTCCTGGGGCTGTCCCAGGGGACGGTGTCGGAGCTCCTGTCGAAACCGAAGCCCTGGGACAAGCTAACTGAGAAGGGACGGGACTCCTACAGGAAGATGCACGCGTGGGCTTGCGACGAGGCTGCGGTGATGCTACTCAAGTCTTTGATCCCTAAGAAAGTTGGTTCGAAGGATGGTAGTATTGGTCCTGGTGGTTTCGGAAGGTCTGACGGCGAGGGGGACGACAGACTGGCTCACATCCTCAGCGAGGCTTCTCATATGATGAAGACGCCCTCGGGAGCGCCCATGAACGATGATTCTAGAAGCAATGAAGACTCCAGCTCGCCTAGGACGCAGTGCCTCTCGCCTTTCTCTAAGGATTCGAGCCAAAACCGAAGGTTGAAGAAGTATGAGAACGATGACATTCCTCAGGAGAAGGTGGTTAGGATCTACCACGAGGAGCTAGCCAAAATCATGACCAGGCGGGTCGAGGATATCCGTCACAACCGGGAGGGCTTCCCTGGTATGTTTCCCCCTTTTTTCAGCGGTGGCATGCCCCCTCACATGGAACGACCCCCCGAAGACATCCGCATGGCGTTAGAAGCATACCACAGAGAACTGGCCAAGATACAACCTGGAGGTAACATCCCAAATCTACACAACCTCCCAGGAATGCCACCTTTCCCAAACCTCCTCGCTCTGCAGCAGCAGGCCATGCAGCAAGCCCAGAACCAACACATCAACGGTGGAGCTGTCCAAGATCTCTCACTCCCAAAGGAAAAGAACGCCAAAATAAACGGAATGACTGATAGCGATAAGGAAAGATCTATGGATGCTGAGGAGGCGATCCGACACGCTGGTAGCGCGTTCTCTCTCGTCCGACCGAAGCTAGAGCCTGGCCAGTCCACGGGCTCATCTGCCTCAAGTCCGCTGGGGAACGCGATACTTCCCCCAGCGATAACTCCTAACGATGACTTTAACACTTCAGCGGCCGCTAGTCCGCTCCAACGCATGGCTTCCATCACCAACAGTCTGATCTCTCAACCCAACAACCCTCCCCACCACACACCAGCACAACGATCAATGAAAGCAGTGCTTCCACCAATCACACAACAGCAGTTCGACCTCTTCAACAACTTAAATACTGAAGACATCGTCCGAAGAGTGAAAGAGGCCTTGAGCCAGTACTCGATCAGTCAAAGACTGTTCGGGGAGTCTGTGCTAGGGCTGTCGCAAGGGTCGGTCAGTGACCTACTGGCGAGGCCGAAGCCCTGGCACATGCTGACGCAGAAGGGCCGGGAGCCTTTCATCCGGATGAAGATGTTCCTCGAAGATGACAACGCGGTGCACAAGCTGGTCGCCAGCCAGTACAAGATCGCGCCGGAGAAGCTTATGAGGACTGGAAACTACAGCGGAGCACCGATATGTCCGCCAATCATGAACAAACCAATGCCTCCAACGCAGAAGATGATCTCAGACGCCACCTCTCTGCTCAGCAAGATGCAGCAGGAACAACTTCTAGGACCCGGTCACATGGGACACTTAGGGCAGCCTCCTCCACTACTGCTGACACCCCCCGGCTTCCCCCCACACCATGCAGTGACCCTTCCTCCTCAACACCACGACAACAACAACAAGGAGAGGAAACCGCCACCGCCACCACAGCCGCACCACCATCCACCAATCATGCGCAGTCTCCACCAACACATATCCCCCAGCGTCTACGAAATGGCCGCGCTAACGCAGGACCTCGACACGCAAACGATCACCACAAAAATCAAGGAGGCTTTACTCGCGAACAACATTGGACAGAAAATCTTCGGAGAAGCTGTCCTCGGTCTTTCCCAAGGTTCGGTCAGCGAGCTGCTATCCAAGCCCAAACCCTGGCATATGCTGAGCATCAAAGGCCGAGAGCCGTTCATAAGGATGCAGCTGTGGCTCAGCGACGCGCACAACATCGATCGTCTGCAAGCTCTGAAGAACGAGCGGCGGGAAGCCAACAAGCGGCGTCGTTCCAGCGGGCCCGGGCAAGACAACTCCTCTGACACATCATCCAATGACACGTCAGAGTTCTACCACTCCAGTTCTCCCGGGCCTACCACGGGAGCCCCCTGCGCTAAGAAGCAAAGGGTTCTTTTCTCTGAAGAGCAGAAAGAGGCTTTGAGACTTGCATTCGCTCTCGATCCCTACCCAAACATGCCGACGATAGAATTCCTTGCCTCAGAACTAGGGTTGTCGACGCGGACGATAACTAATTGGTTCCACAACCACAGGATGCGTTTAAAGCAGCAAGCACCGCATGGTCTCCCAGCGGAACCGCCTGCGAGAGACCAGTCTTCCGCTCCATTTGACCCGGTCCAGTTCCGTTTACTCCTCAACCAGAGATTGCTGGAATTGCAGAAGGAAAGGATGGGCTTGGCCGGAGTACCGCTCCCATACCCGCCCTACTTTGCGGCTAATTCCAATCTAGCTGCTTTGATCGGTCGCGGTTTAATACCTCCAGAAGGCGCGGTAAAAGACCAGAGTGGAGGCCTAGATCTATCCATGCCATTGAAACGGGAACCAGATGGTGAGGACTACGAGGATGATGATGTGGAAAGCAACCTCGGGTCGGAAGACTCGCTGGACGATGAGTCAAAGACTGAGCCGAAAGCGGCGTCGACACCGACTGCTCGCTCCAGCAGACGGAAACCAGCCGCGCCTCAATGGGTCAACCCTGACTGGCAGGAGGACAAGCCGAGAAACCCTGACGAGGTCATCATCAACGGAGTGTGTGTAATGAGAAGCGATGACTTCAGGCGAGAGTCTGAGGAGACGGTTCGTATTGAGCCTTCTCCGGTCCCCAGGGACGGGTCCCCCCTTCCTCCGAGGACCCCTCAGACCCCTCAGACCCCGCAGACTCCGCGGCCGCTGCACACGCCCGATGACGTCATCCCAGAGGACAAGATAAAGTCGGAGACGGATGACGATCGGTGGGAGTACTGA
Protein Sequence
MRLALGERHIFSPLVWFPRSQPTVSNSCVVSTRLHDTIESRSSAHLDAPTIDIEGQQITDRSWQSHNDLVVTDTRFDLQLCYEYSRADEIAQLVEDVRRLQSSLAALQEAHAQQLQRLEDRLDEKKQHIARLEARLDGQRDYDDVKREINMLRSLDLGSERSDRSDRLDHTDRSNRLERLERPDRLDRPDRLDRLERERIERKPERSPSVVPNERSSVERERSAERREPGPEEWPSTPPLNNNTTHHNNNGPTPLPLPPPSPFRFDDHRPYRFADDMGPLPPGALVGRLGDSLIPKGDPMEARLQEMLRYNMDKYANSNLDTLHISRRVRELLSVHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDEAAVMLLKSLIPKKVGSKDGSIGPGGFGRSDGEGDDRLAHILSEASHMMKTPSGAPMNDDSRSNEDSSSPRTQCLSPFSKDSSQNRRLKKYENDDIPQEKVVRIYHEELAKIMTRRVEDIRHNREGFPGMFPPFFSGGMPPHMERPPEDIRMALEAYHRELAKIQPGGNIPNLHNLPGMPPFPNLLALQQQAMQQAQNQHINGGAVQDLSLPKEKNAKINGMTDSDKERSMDAEEAIRHAGSAFSLVRPKLEPGQSTGSSASSPLGNAILPPAITPNDDFNTSAAASPLQRMASITNSLISQPNNPPHHTPAQRSMKAVLPPITQQQFDLFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGNYSGAPICPPIMNKPMPPTQKMISDATSLLSKMQQEQLLGPGHMGHLGQPPPLLLTPPGFPPHHAVTLPPQHHDNNNKERKPPPPPQPHHHPPIMRSLHQHISPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNIDRLQALKNERREANKRRRSSGPGQDNSSDTSSNDTSEFYHSSSPGPTTGAPCAKKQRVLFSEEQKEALRLAFALDPYPNMPTIEFLASELGLSTRTITNWFHNHRMRLKQQAPHGLPAEPPARDQSSAPFDPVQFRLLLNQRLLELQKERMGLAGVPLPYPPYFAANSNLAALIGRGLIPPEGAVKDQSGGLDLSMPLKREPDGEDYEDDDVESNLGSEDSLDDESKTEPKAASTPTARSSRRKPAAPQWVNPDWQEDKPRNPDEVIINGVCVMRSDDFRRESEETVRIEPSPVPRDGSPLPPRTPQTPQTPQTPRPLHTPDDVIPEDKIKSETDDDRWEY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01338275;
90% Identity
iTF_00700898;
80% Identity
iTF_00704846;