Basic Information

Gene Symbol
Kdm5
Assembly
GCA_955876795.1
Location
OY041624.1:10510442-10541164[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 6.5e-24 1.6e-20 74.2 0.0 2 89 101 184 100 184 0.94
2 2 3.9 9.5e+03 -2.0 0.0 47 71 1298 1322 1286 1338 0.65

Sequence Information

Coding Sequence
ATGGGAAAATGTGATGAAACGAATGTGGAAGTGAATATGGGGGACTCTGCGTCCCCCATGAAGCCCGACAACTTCACGTTCACACCGCCCCCCGAGGCGCCGGTGTTCGAGCCCACGGCCGAGGAGTTCCTGGACCCTCTGGCGTACATCAGCAAGATTCGACCTATCGCTGAGAAATCCGGGATTTGCAAGATAAAACCACCAGCGcACTGGCAGCCCCCCTTCGCGGTGGACGTGGACCGACTCCGCTTCACACCGCGCATCCAGCGACTCAATGAGCTCGAGGCCATAACCCGGGTGAAGCTCAACTTCCTGGACCAGATCATCAAGTTCTGGGAGCTGCAGGGCAACGCGCTCAAGATCCCCACCGTGGAGCGCAAGCCGCTCGACCTCTACGCGCTCCACAAGATTGTCAGGGAAGCAGGTGGGTTCGAGGTATGTTCCGGGGAGCGCAAGTGGTCCAAGATCGCGCGGCGCATGGGCCACCCGCAGGGGAAGGGCATCGGCTCCATCCTCAAGAACCACTACGAGCGGATCCTCTACCCCTACGACGTGTTCAAGAGCAATGGTGCTGTGGCCGATCATAAGGAGACTAAGATAGAAGTGAAACGCGAAACGACCCCCGAGCAGGCCGGGGCGGGgacggcggcgggcgcggggtGCGGAGTGCGCGCACGCTCCTCCTCCAAGTGCGCGGCCTCCCCGCCCGCGGGCGCGCCCTCCCCCGCGCGCCGCTACAAGGCCGAGCCCGAGGCCGCGGAGGGCTCGCACACCGAGGGCGCGCTGCCGCCCAACAGTGACAAGGGCATGAAGACACCCGTCAAGGAGGAGAGCCCGGAGACTAACAGACGCAGTCCTCGCGAGAACAAGTGGATGTCGAGTGAGGGCAGCTGCGGGTCGCGCGGGCGCGTGACGCGCAGCGCGCGCCTGCGCGAGCACCGCATGTCCAACATGACGGTGTCCGTgacgcccgcgccgccgcccgccgccgcgcccagGCCGGACAACAACAACGACCCGCTGGCCAAGTACATGTGCCACGTGTGCGGGCGCGGCGACGTGGAGGAGAACATGTTGCTGTGCGACGGCTGCGACGACTCCTACCACACCTTCTGTCTGCTGCCGCCGCTCGCCGTCGTGCCCAAGGGCGACTGGCGCTGCCCCGTCTGTCTGGCCACGGAGGTATCAAAGCCAGCTGAAGCGTTCGGCTTCGAGCAAGCGTCGCGCGAGTACACGCTCCAGCAGTTCGGAGAAATGGCCGACCAGTTCAAATCTGACTACTTCAACATGCCAGTACACATGGTCCCAACATCAACAGTGGAGAAGGAGTTCTGGCGCATCGTGTCTTCCTTGGACGAAGACGTCACAGTGGAGTACGGAGCTGACCTGCACTCCATGGACCATGGATCTGGGTTCCCCACAAAGTCGAGCGCGCACCTGTATCCGGGCGAGCAGCAGTACGCGGACTCCAGCTGGAACCTGAACAACCTGCCCGTGCTGGAGGGCTCCGTGCTGGGACACATCAACGCAGACATATCCGGCATGAAGATCCCCTGGCTGTACGTGGGCATGTGCTTCGCGGCGTTCTGCTGGCACAACGAGGACCACTGGAGCTACTCCATCAACTACCTACACTGGGGGGAGGCCAAGACCTGGTACGGAGTGCCGAGCTCTAAGGCTGAGCAGTTCGAGGCAGCCATGAAGGCGGAGGCGCCGGAGCTGTTCCAGCTGCAGCCGGACCTGCTGCACCAGCTCGTCACCATCATGAACCCCAACATCCTCATGAAGGCAGGGGTTCCAGTCTACAGATTGGACCAGCACGCAGGAGAGTTCGTGGTGACGTTCCCTCGCGCCTACCACGCCGGCTTCAACCAAGGGTACAACTTCGCGGAGGCCGTCAACTTCACGCCGGCCGACTGGTTGAAGATGGGTCGCGAGTGCGTGGTGCACTACAGCACGCTGCGGCGCTACTGCGTGTTCTCGCACGACGAGCTGGTCTGCAAGATGGCGCTGGAGGCGGACGCGCTCACGCTGACGGTCGCGCTGGCCGCCTACCGCGACCTGCGCACCATGCTGCACGCCGAGCGCAAGCTGCGCAAGACCCTGCTGCAATGGGGCGTGACGCTGGCGGAGCGCGAGGCCTTCGAGCTGCTCCCGGACGACGCGCGGCAGTGCGTGGTGTGCAAGACGACGTGCTTCCTGTCGTGCGTCACGTGCGCGTGCACGCCGCACGTGGCCTGCCTGCGCCACGCCACCATGCTCTGCGACTGCGCTCCCTCCAAACACACACTAAGATTCCGGTACACCCTGGACGAGCTGCCAACCATGCTGAGCAAGCTGAAGGCCAAGTCGGAGCAGTTCCGGTCGTGGGCCGAGGCCGTGCAGAACGCGCTGGACCCCGACACGCCCAAGACCTGCGATCTGGACGGACTGCGGCACCACCTGCACAAGGCGCACCAGCTCAAGATGCAAAAAACAGAACTAGTGCGAGCTTTAGAAACAGCGATCGAAGACGCGGAGAAATGCGCGTCCGTGATACAACAGCTGGACCTGAACAAGATGCGCACGCGCACGCGGCACCACGACCCCAAGTACCGGCTGTCCATACACGAGCTCACGCTGTTCGCCGCAGAGATCGACAGCCTGGCCTGTGTGCTGCCGGAAGGGTCCGCCGTGAAGGAGGTGCTGCGACAGACGTCGGAGTTCgaggcgcgcgccgccgcgctgCTGCAGCACGACCTGGACAAGATCGAGACGTCCTACGTGCGGGACGTGGAAGAGACTGTGGAGCTGGGCGGGCGGCTGTGCATCGTGCTGCCGCAGCTGGAGGCGCTGTCGGCGCGACTGGCGCAGGCGCGCTGGCTGGAGGAGGCGCAGCAGCACCGCGAGGGCTGCGCCACGCTGACGCCGGCCGCGCTCTCCGCGCTGCTGGCGCGCGCCGACACACTGCCGCAGCACCGCGCCATCGAGCACGAGCGCGCGCTGCTCTACAGGCTGCAAgTGGAAGTAGAAGAATGGGAGAAGAAGGCGCAAGCGGTCCTCATCGACACGTCCAAGTCGCCCCTGGACGAGGACAACCCGCAGTACAGCACGTTGGCCTCGCTGGGCGCGCTGCTGGCGGAGGGCACGGACATCGAGGCGGCGCTGCCCTCCTACCACGCGCTGCAGTCCGCCATCGCACACGCCAAGGACTGGCTGCACAAGGTGGAAGAGATGCAGTCCTCGGACCTGTACCCGTATATCCACTCGGTGGCGGCGCTGGTGCGGCGCGCGGCCTCGCTCCCGCTCGCTCTGTTAGAGAAGGAGCAGCTGAACACCGCGCTGCACTCCGCCGAGGAGTGGCGTCGCGGGGCCGCGGATATGTTTCTCAAGAAGAATTGGAAAGGCGGGCTCCTGGAAGCTCTATCGCCGCGCACGTCgttcggcggcggcgcggcggggcgcaAGCGCGGCGCGACGGGCGGCGCCGGCGGTGGCAGTGCGCTGGCGGACAAGTTCACAGAGGAGAGCACTCCGCATGAGATCGTGACCGCTTTCAAGCAGGCGGAGGCCAGCGAGCTGCAGGCCATCAAGGAGCTCAGGGCTCGCAACACGCGCAAGGACGTGCGCGCGCCGCCCGCCACCACCATCACCTTCTGCATCTGCCAGAAGCGCCAGTACGGAGTCATGACGCAGTGCGAGCTCTGCAAGGACTGGTTCCACGCGTCGTGCATCGCGAACGCCCGCGACGACCGCGAGGAGTCCCCGGACCGCGAGGGCTTCCCGAGCGCAGAGTCCAAGTTCCTGTGTCCGGACTGCGTGCGCACCAAGCGGCCGCGGCTCGACCGCATACTGGCCTTGTTGGTGTGGCTGCAGAAGCTGCCGGTGCGGCTGCCGGAGGGCGAGGCGCTGCAGTGCGTGACGGAGCGCGCCATGGCGTGGCAGGACCTGGCGCGGCATGCGCTCTCAACGCAGCACCACGAGACACAGGCGAGCCGGGAGAAGGCGGACAAACTCAACTCCGAGCTGAAGAAGGCCACCGCGCGCCTGCACGACCAACACCACTCCAGGTCGTCGGCGAGCGTGGAGCACGCGTACAGCGCGAGTCCGCGCGGCGGCTCCGAGGGCGCGCGCCTGTCGCCCGCCGCGCTCGGCAAACTGGAGGACCTCATGCTGGAGGGAGACCTGCTGGAGGTGAGTGCGTCCGCACCTACGCGAGGAGAGTGTGAGTGTGGAGCCGGTGGGAATATATCTCTTTCTCTTTCTGCGCAGGTGGTGCTGGAGGAGCAGCGGCTCGTGTGGAGCGCGGTGTGCagcgcgcgcggcgcggcggggcggcgcggcgcgcgcgtTCTGGACGCGGGACGCGCCAAGCGACGCACGCCGCACACGCACCGGCACGCCAAGCGCACGCGCACGCTACATGCACCAGGCGGCGCGGCCCCGTCCCTGCCGTCCACCTCGAAGACCAGCGGCGCGCGTCGGGGCGCCTCCACCACCAACTACCTCAACAGGAAACAGGGCGTGTCCTCCGCGTCCGGCCTCATGATGCGCAAGCACTACATGGCGCGCCAGGAGCGCCGCAAGAGAGGCGTCGCCACCCGGCACAGAGGCGGTCGCGGGCgcgcggcggggcgcggcggcggcgcggcggcgacgCGGCCCGACAGCTCCTCCTCCTCCGCCTCCTCCGCGGACGACGAGGAGGACTGCGCCGCCGACAACTGTCTCCGACCCACCGGCAAGGTGGACTGGGTGCAGTGCGACGGCGGTTGCGACGAGTGGTTCCACATGCACTGCGTGGGCGTCGCGCGACACGCGCTGCGCGACAACGACGACTACGTGTGCGGCGCGTGCGCGCGCGACCGCCCCCCCGCGTAG
Protein Sequence
MGKCDETNVEVNMGDSASPMKPDNFTFTPPPEAPVFEPTAEEFLDPLAYISKIRPIAEKSGICKIKPPAHWQPPFAVDVDRLRFTPRIQRLNELEAITRVKLNFLDQIIKFWELQGNALKIPTVERKPLDLYALHKIVREAGGFEVCSGERKWSKIARRMGHPQGKGIGSILKNHYERILYPYDVFKSNGAVADHKETKIEVKRETTPEQAGAGTAAGAGCGVRARSSSKCAASPPAGAPSPARRYKAEPEAAEGSHTEGALPPNSDKGMKTPVKEESPETNRRSPRENKWMSSEGSCGSRGRVTRSARLREHRMSNMTVSVTPAPPPAAAPRPDNNNDPLAKYMCHVCGRGDVEENMLLCDGCDDSYHTFCLLPPLAVVPKGDWRCPVCLATEVSKPAEAFGFEQASREYTLQQFGEMADQFKSDYFNMPVHMVPTSTVEKEFWRIVSSLDEDVTVEYGADLHSMDHGSGFPTKSSAHLYPGEQQYADSSWNLNNLPVLEGSVLGHINADISGMKIPWLYVGMCFAAFCWHNEDHWSYSINYLHWGEAKTWYGVPSSKAEQFEAAMKAEAPELFQLQPDLLHQLVTIMNPNILMKAGVPVYRLDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFTPADWLKMGRECVVHYSTLRRYCVFSHDELVCKMALEADALTLTVALAAYRDLRTMLHAERKLRKTLLQWGVTLAEREAFELLPDDARQCVVCKTTCFLSCVTCACTPHVACLRHATMLCDCAPSKHTLRFRYTLDELPTMLSKLKAKSEQFRSWAEAVQNALDPDTPKTCDLDGLRHHLHKAHQLKMQKTELVRALETAIEDAEKCASVIQQLDLNKMRTRTRHHDPKYRLSIHELTLFAAEIDSLACVLPEGSAVKEVLRQTSEFEARAAALLQHDLDKIETSYVRDVEETVELGGRLCIVLPQLEALSARLAQARWLEEAQQHREGCATLTPAALSALLARADTLPQHRAIEHERALLYRLQVEVEEWEKKAQAVLIDTSKSPLDEDNPQYSTLASLGALLAEGTDIEAALPSYHALQSAIAHAKDWLHKVEEMQSSDLYPYIHSVAALVRRAASLPLALLEKEQLNTALHSAEEWRRGAADMFLKKNWKGGLLEALSPRTSFGGGAAGRKRGATGGAGGGSALADKFTEESTPHEIVTAFKQAEASELQAIKELRARNTRKDVRAPPATTITFCICQKRQYGVMTQCELCKDWFHASCIANARDDREESPDREGFPSAESKFLCPDCVRTKRPRLDRILALLVWLQKLPVRLPEGEALQCVTERAMAWQDLARHALSTQHHETQASREKADKLNSELKKATARLHDQHHSRSSASVEHAYSASPRGGSEGARLSPAALGKLEDLMLEGDLLEVSASAPTRGECECGAGGNISLSLSAQVVLEEQRLVWSAVCSARGAAGRRGARVLDAGRAKRRTPHTHRHAKRTRTLHAPGGAAPSLPSTSKTSGARRGASTTNYLNRKQGVSSASGLMMRKHYMARQERRKRGVATRHRGGRGRAAGRGGGAAATRPDSSSSSASSADDEEDCAADNCLRPTGKVDWVQCDGGCDEWFHMHCVGVARHALRDNDDYVCGACARDRPPA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00632545;
90% Identity
iTF_00699881;
80% Identity
-