Esub029868.1
Basic Information
- Insect
- Eupithecia subumbrata
- Gene Symbol
- pnr
- Assembly
- GCA_949316285.1
- Location
- OX438650.1:18848897-18849948[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.2e-18 6.3e-15 55.4 6.0 1 34 15 47 15 49 0.98 2 2 7.3 2.1e+04 -3.9 0.1 22 24 137 139 134 139 0.74
Sequence Information
- Coding Sequence
- ATGTCCACAACGCagtcggcggcgcggcgtcacGGGCAGTGCTGCACGAACTGCGGGTCGCGCAACACGACGCTGTGGCGGCGCAACAACGACGGCGAGCCCGTCTGCAACGCGTGCGGCCTGTACTACAAGCTGCACGGCATCAACCGGCCGCTCGCCATGCGCAAGGACGGCATCCAGACGCGCAAGCGCAAGCCCAAGAAGTCCGGCGCCAACAAGCCGCCGCACGACAAGAAGGACGGACACTCCTCCCCCACCATCGACGCGGACAGCAAGTCCAGTGTGGGCGAGGTGGCGATGCCGCTGTCGGCGTCCATGTgcggcgcgcggggcgcgggcgcgggcgcgtcGCCGCCGGCGCAGCACCCCGCGCTGCACGGGGGCGCGCAGTACGCGGCGGGGGGCGCGCTCTGCAACATCAAGAGCGAGCCCAGCCACGCCGCCCCCTACGACCACTACAACTACCACCACCAGCACCACTACCTGCACGCGCTGCAGTACGGCGTGGGCGGAGGCGAGGAGGAGGAAGCCAGCGGATTCCTGCATCAGCGGAACGTGACCGCGCACGCCAAGCTCATGGCCTCCACGTAG
- Protein Sequence
- MSTTQSAARRHGQCCTNCGSRNTTLWRRNNDGEPVCNACGLYYKLHGINRPLAMRKDGIQTRKRKPKKSGANKPPHDKKDGHSSPTIDADSKSSVGEVAMPLSASMCGARGAGAGASPPAQHPALHGGAQYAAGGALCNIKSEPSHAAPYDHYNYHHQHHYLHALQYGVGGGEEEEASGFLHQRNVTAHAKLMAST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00701637;
- 90% Identity
- iTF_00701637;
- 80% Identity
- -