Basic Information

Insect: Eupithecia subumbrata
Gene Symbol: -
Assembly: GCA_949316285.1
Location: OX438637.1:3141476-3142528[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 7.4 6.3e+02 2.1 0.1 12 23 36 48 26 48 0.84

2 10 0.28 24 6.6 0.7 2 23 80 102 79 102 0.93

3 10 0.02 1.7 10.1 0.2 2 23 129 150 128 150 0.96

4 10 3.3 2.8e+02 3.2 1.7 3 19 156 172 155 177 0.67

5 10 0.12 11 7.7 0.5 2 22 182 202 181 202 0.94

6 10 0.0019 0.16 13.4 6.9 1 23 209 232 209 232 0.93

7 10 5e-05 0.0043 18.4 1.4 1 23 239 262 239 262 0.98

8 10 0.001 0.085 14.3 3.1 1 23 267 289 267 289 0.96

9 10 0.00056 0.048 15.0 1.9 1 20 297 316 297 319 0.91

10 10 1.8e-05 0.0015 19.8 4.8 1 23 325 348 325 348 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	7.4	6.3e+02	2.1	0.1	12	23	36	48	26	48	0.84
2	10	0.28	24	6.6	0.7	2	23	80	102	79	102	0.93
3	10	0.02	1.7	10.1	0.2	2	23	129	150	128	150	0.96
4	10	3.3	2.8e+02	3.2	1.7	3	19	156	172	155	177	0.67
5	10	0.12	11	7.7	0.5	2	22	182	202	181	202	0.94
6	10	0.0019	0.16	13.4	6.9	1	23	209	232	209	232	0.93
7	10	5e-05	0.0043	18.4	1.4	1	23	239	262	239	262	0.98
8	10	0.001	0.085	14.3	3.1	1	23	267	289	267	289	0.96
9	10	0.00056	0.048	15.0	1.9	1	20	297	316	297	319	0.91
10	10	1.8e-05	0.0015	19.8	4.8	1	23	325	348	325	348	0.98

Sequence Information

Coding Sequence: ATGGTGAGTCGGAACGCGGAAACGGTATTGAAGTATTCCACGATGTATCCATTCAGATTACGGAAAATGAACATAATGTGCGTTTACTGCTGTGACGAAGTACAAGACCCCGATAGCTTCAGGAGCCATATGAACGAAATCCACAAAACCGTTAATGTAGACATTGCGTTTGCTCACGTCAAATCTAGAAACAGAGTAGGCGACAAAGATTACCTAAAGGTTGACTGCACGAATCTAAAATGCAGATTGTGCGATGAACCTTGCAACTCAATTGCTACAGTTGCTAAGCATCTGAAGGACCGTCATGAAAACGACGATATCAAATCCATGGATCTGAGCTATGAACTGGGTCTATGCCCGTTCAATTTGATTAAGGATAAATGGGTCTGTGTGTTGTGCAATTTGAAACTGCCAACACTGAACAAGCTGAGTCGACACATGTCTTCCCATTACGCTGAAAACGTGTGCAATTTTTGTGATAAGCGGTACTTGAGCGCACACGGCTTGAGGTTCCACGTTAAGTTCAATCATTCGAATGTAGACAGTTGCAGAAAGTGCATGAAGGAGTTTTCTACTCCGGGCGAAAAGAAGGAACACCTAAAAACATCAGTGAAGTGCCTGGGATTCTGTTGCGTTCATTGTAATAAAAGGTTCTCTTCTTGGGAACACAAGCAGAGGCATTTAGTCAGCGAACACAATGTTAAAGCTACTACATATCCTTGCCCGGATTGCGAGACTGTTTTTAATTCGAGATCTAAGTTCTACTATCATTATAATACTACACATTCTGATTTACCTCACATGTGCTCTTATTGCGGTAAACGTTTTCTGAAGAAAAGTCAGCTGGATAATCATGTGAGTAGCCATACGGGGAAGATTCTAGAACAACACCAGTGTTCTACCTGCGCCAAGACCTTTACTAGAAGGCAAGGGTTGCAGGAACATTTGTGGACGCATAAGGAAACTAAGCGATTTTCGTGCTCTTCTTGTGATAAACATTTCACTACTAAAAGATATTATAATTGGCATATGAAAACTGCACATAAACAATAA
Protein Sequence: MVSRNAETVLKYSTMYPFRLRKMNIMCVYCCDEVQDPDSFRSHMNEIHKTVNVDIAFAHVKSRNRVGDKDYLKVDCTNLKCRLCDEPCNSIATVAKHLKDRHENDDIKSMDLSYELGLCPFNLIKDKWVCVLCNLKLPTLNKLSRHMSSHYAENVCNFCDKRYLSAHGLRFHVKFNHSNVDSCRKCMKEFSTPGEKKEHLKTSVKCLGFCCVHCNKRFSSWEHKQRHLVSEHNVKATTYPCPDCETVFNSRSKFYYHYNTTHSDLPHMCSYCGKRFLKKSQLDNHVSSHTGKILEQHQCSTCAKTFTRRQGLQEHLWTHKETKRFSCSSCDKHFTTKRYYNWHMKTAHKQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00702380;
90% Identity: iTF_00701576;
80% Identity: -