Esub026287.1
Basic Information
- Insect
- Eupithecia subumbrata
- Gene Symbol
- ZBTB41
- Assembly
- GCA_949316285.1
- Location
- OX438648.1:7644017-7645468[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.00044 0.037 15.4 3.5 2 23 162 184 161 184 0.95 2 10 0.0091 0.78 11.2 0.6 2 22 190 210 189 210 0.94 3 10 0.037 3.2 9.3 1.8 1 23 232 254 232 254 0.96 4 10 0.0014 0.12 13.8 0.3 1 23 260 283 260 283 0.93 5 10 5.4e-05 0.0046 18.3 7.2 2 23 291 312 291 312 0.98 6 10 0.0011 0.093 14.1 1.1 1 23 321 343 321 343 0.98 7 10 0.00035 0.03 15.7 0.0 1 23 349 372 349 372 0.95 8 10 0.49 42 5.8 2.2 1 23 378 400 378 400 0.96 9 10 0.00073 0.062 14.7 0.2 3 23 407 427 405 427 0.97 10 10 5.5e-05 0.0047 18.2 5.1 1 23 432 455 432 455 0.96
Sequence Information
- Coding Sequence
- ATGGGGGAGGACAGGAAAAGTACTGCCATTTGCAGAGTTTGTTTGAGTTATGATTTTCAAAGGGCAGATGGCAAAAGTGTATCGTTGTTTGAAGAATGCAATGATAGGGTTATTGCGGACAAAATAAACGCTCTTGCAAAAGTCGGCATAAAAGAAGGTGATGGTTTGCCCGATAGGATATGTCCAGAATGCCTCCTTGAGCTCGAAAACGCATTCAAGTTCAAACTGAAGTGTGAAAGAACTAATGAAGTCCTACTCGCTGCCGTGAACGAGGCTCCTACCTTCGAAGGCAATGATGGTGACTTCCATGATAATGACCTCTATATGAAAGAAGAATACCTTGATGATATTGAAGCTGATTATGTAGAACTGGATGATCATATTACTTTAGCAGACATAAAGGCCTCTAGGTCTAGCTCTTTAAAAACAGAACTGCCTGTAGCAGCTCCACCTAAACCCAGTAAAGCAATCGATTTGAAATTAATATGCCATGACTGTGGTGGATCTTTCAAGAGCAAGTGCAAGCTCAGAGTACATTGGAAGAAAGTGCATTTGAGTGAAAACCTGAAATGTGAAATCTGCCTAAGAAAGTTCAAATCATTTGCAGCCTTCATTTCACACCAAAAGAAAAACTTGAAAAGCTGTCTGGCTGCTAGCAAAGTACGCATTGAAGGTGAGGGTAAGAACCGTATCTTCCACTGCAAAGAATGTGACTATCATAGTAAGCGTATCAAAGATGTGGAAGCCCACATTGTAATTCACTCTGGTGAGCGACCATTTCGATGTGATATCTGTCTGAAGGATTTTACCCAACTTAGTTCTGTTAATGTACATAAAGAAAATGCACATAAACTGTTTAAAACTGAAGGAACATGTCAGCACTGTGGGAAACATTTCAAAGGTCGTTCAAAATTATACAAACATCTACGAACCCACAATAAAAGCAGTTGCCCTGATGGTTATCCCTGTAAAATTTGCAAAGcagtacttaaaaataaaaatagtttgtATATCCATAAGAAAAGACATTCTGGTGTAAAGGCCTATGTATGTGAAGTTTGTCCAGCTTCTTTTTATAGTCCAAGTGAACTTTGGGGCCATAAAGAGAAAGTTCACATTAAATCAAAACTATTCTCTTGTAATATATGTAACTACTCAAATCTCTCAAACTATTATATAAAGAAGCATATGATGAAGCATACAGCTTCAAACTTTGGCTGTAAAGTTTGTGGTATGATTTTTGAGAATGAGTATCAACTAGAACTTCATGGGAAGAGACACACAGACAGGAACTATGCCTGCACACATTGTGATAAGACATATTACTCTAAGAAGAACCTGCTAGCGCATGTTCGGCACAAGCATAAGTTTGTCATGTTGAATGGACCTCCAGCTAGTAAAAGACCAGCAGCTTGCAAAAATCTCAAGATTGACCGTTCTTCTAAAAGTTAA
- Protein Sequence
- MGEDRKSTAICRVCLSYDFQRADGKSVSLFEECNDRVIADKINALAKVGIKEGDGLPDRICPECLLELENAFKFKLKCERTNEVLLAAVNEAPTFEGNDGDFHDNDLYMKEEYLDDIEADYVELDDHITLADIKASRSSSLKTELPVAAPPKPSKAIDLKLICHDCGGSFKSKCKLRVHWKKVHLSENLKCEICLRKFKSFAAFISHQKKNLKSCLAASKVRIEGEGKNRIFHCKECDYHSKRIKDVEAHIVIHSGERPFRCDICLKDFTQLSSVNVHKENAHKLFKTEGTCQHCGKHFKGRSKLYKHLRTHNKSSCPDGYPCKICKAVLKNKNSLYIHKKRHSGVKAYVCEVCPASFYSPSELWGHKEKVHIKSKLFSCNICNYSNLSNYYIKKHMMKHTASNFGCKVCGMIFENEYQLELHGKRHTDRNYACTHCDKTYYSKKNLLAHVRHKHKFVMLNGPPASKRPAACKNLKIDRSSKS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00706380;
- 90% Identity
- iTF_00703370; iTF_00703364;
- 80% Identity
- -