Basic Information

Insect: Eupithecia subumbrata
Gene Symbol: Sall2
Assembly: GCA_949316285.1
Location: OX438643.1:27016554-27036120[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0005 0.043 15.2 0.2 2 23 146 167 145 167 0.93

2 11 0.00072 0.062 14.7 2.4 1 23 173 195 173 195 0.96

3 11 0.0085 0.72 11.3 0.1 1 23 293 315 293 315 0.94

4 11 0.79 67 5.1 0.4 2 23 322 344 321 344 0.93

5 11 0.00026 0.022 16.1 0.0 3 23 397 418 395 418 0.90

6 11 0.0049 0.42 12.1 0.7 1 23 431 453 431 454 0.93

7 11 1.2e-05 0.001 20.3 0.2 1 23 481 503 481 503 0.98

8 11 0.00078 0.066 14.6 0.2 1 23 509 531 509 531 0.97

9 11 0.00044 0.037 15.4 0.3 1 23 537 559 537 560 0.95

10 11 0.058 5 8.7 0.4 1 23 575 597 575 597 0.97

11 11 0.0041 0.35 12.3 0.1 1 20 755 774 755 777 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0005	0.043	15.2	0.2	2	23	146	167	145	167	0.93
2	11	0.00072	0.062	14.7	2.4	1	23	173	195	173	195	0.96
3	11	0.0085	0.72	11.3	0.1	1	23	293	315	293	315	0.94
4	11	0.79	67	5.1	0.4	2	23	322	344	321	344	0.93
5	11	0.00026	0.022	16.1	0.0	3	23	397	418	395	418	0.90
6	11	0.0049	0.42	12.1	0.7	1	23	431	453	431	454	0.93
7	11	1.2e-05	0.001	20.3	0.2	1	23	481	503	481	503	0.98
8	11	0.00078	0.066	14.6	0.2	1	23	509	531	509	531	0.97
9	11	0.00044	0.037	15.4	0.3	1	23	537	559	537	560	0.95
10	11	0.058	5	8.7	0.4	1	23	575	597	575	597	0.97
11	11	0.0041	0.35	12.3	0.1	1	20	755	774	755	777	0.94

Sequence Information

Coding Sequence: ATGGATGGTGATAGAGAATTCAATCTCCATTGGGGAGGGGGGGAAGTAGTGGTGAAGCATGACCCGGACATTGGAAATACACCATTATGTATTGATAATGTGCATGGTGGATATACTAATATGACCCCAGAAGAAATAATGGCGAACACAGATCAAATGGCCGCAGAGAACCTAATGTTCTTAGCTCAAGATGTCATTGGATATACTGAGACAGCGGAATTGGCAGATGATCCCAGTGTGGAGTGCGTCACTGAAGAAGTCATCACTGACGACTGGGGTGTTGATGGGGTGCCGGAGAGAGTGGATGCCCCAATAGATCATCTAGCAAGCACTGTGGATCTGGGTTCTaaagatgataatgatgatcttCTAATACCTGTAGATCAAGAAATAAATCTCCACGCACAAGACGAGTACACTGCAATGCGGCCGTGGCCTTGCGACTTCTGCTCACGACGTTTCCGTAAGAAGGCGGCTCTGATGAACCACATGGTGGCACATCAGAACGACAGACCGCACGCTTGCAATCTGTGTGGAGTTCGCTATGTGCGGAAATGCGATCTGATGAACCATCTGAAGGTGCATGCGTTTGTGCCTGATGATGCGGATTCTATGGACTTTGAAGAAATACTAGAAAACAATCAAATCGTCAAGCCAAAGAAGAAGCGAGGAAGGCGGAAAAAGATACCTCCACCAGAGGAGGATGAATGGGAGAACATGACCTCAGCGCGCACACAGCAATGGTCCCGCCGCGGCCGGTCGCCGGCCAAGCCGCCGCCGTCACCGCCGCCGATGTCGCCCCCttcgccgccgtcgccgccatCACCACCGTCGCCACCGTCGCCGCCGCCTCCGCCAGCTGATCCGTCGCGACCGTTCGTTTGCATCACCTGTGGAATTGGGTTCGCGAGGGAGAAAGCTTTGAAGTCGCATTCTAGGGTCCACGGTGGGGATTCCCCGGTGGAATGTAGCGAGTGCGGCGAACTGTGCTGGTCACGCGAGGGGCTCTCCAACCACATGCTGCAGAAACATCCGCTTGTAGTGCCGCGCGCTACACAGGAGGCTAACTACAATGACTCTGATTCAGATGATGACATGGAATACCGCCTATCCCCGGAATCAGCCCCCAGCGGGGGTCACGAACGCGAGCGTCCGGTCTACGACAACACACGAGGGCCGGAGCTGTTCTGCCCGGACTGTGGCGTGGCGTTTCAACGGGCCGATCTGCTGAGGCGGCATGTAGCTGCGGCGCATAGTTACAAGCGGCGCGTGTCTGGCTCGTGGGGCGAGCACAGGTGCGAGGTGTGCGGCGAGGCGTGCAGTGACGCGCTGCAGCTGCTGGCCCACGCCGAGCTGCACCACGACCGCGTCGCGCCGCCGCACAGGTTAAAAAGACCCAAAGGACATAGTAGCACTTCAATATCGTTATCTGGAAAGCAATTCCCTTGTAGGGAATGTGGCAAAGTATTTGGGTCTCGGAGTTCTCAGCAGATCCACATCCGAATCCACACGGGCGAGCGGCCGTACGCTTGCCGGTTCTGTTGGAAGGCGTTCGCTGACGGTGGCACCCTGAGGAAACACGAGAGGATTCATACAGGTGAAAAACCGTACGCATGTGCGGTGTGCCCGCGCGCGTTCAACCAACGAGTCGTTCTGAGGGAGCACGTCAGATCGCACCACTCTGCGCCGGATCGCAGGCAGCAAGCTAATGGTGGTCCAGCGTATTCGTGCGTAGTTTGTTCGAGAACATTACACACAAGCCCGGAATTAGTGCAGCATCTCATACAGCATTGCGACGCCAACACGGCGCTGAAGAGGCAACCTCAGAACGGACCCCGCAAATACAAGCGCCGGCGGAAGATAAAGAGCGAAGTGTCCCCCGCGCGGCGCGAGTGGGCGACCCCGTCCCCTCCGCCGCAGTCCCCCTCCCCCAACGCGTCACCCGCGCCGTCCCCGCCGCCCGCGTcgcccccgcgccgccgctCGCGCCGGGAGCCCGTCGCTAGACCGAAGATGATACATACTTCCGAGGAGACTAGAAAGGTTAAGGGCAAGAGCGTGCGTCAGCGGCGACCACCTCGTCACCCGGCTGACGACCTCCGAGCTATCGGAAACCATCCGCACTCGCTGAAACAAGAGCCCAAGAGTGAGGCAGATTCGCCCAAACCTTCGCCCGTGCCTTCGCCCGTACCTTCGCCCGTACCTTCGCCCGTGCCTTCGCCCCAACCGGACGAGACAGAGAAAATTGATGAAGGAGGGCCGTACAAGTGTGAAATGTGCTCGTTTGAGTTCCCGCGACGCAGTGCGTTGCTCTTACATGTGCCTGTCCATATATGA
Protein Sequence: MDGDREFNLHWGGGEVVVKHDPDIGNTPLCIDNVHGGYTNMTPEEIMANTDQMAAENLMFLAQDVIGYTETAELADDPSVECVTEEVITDDWGVDGVPERVDAPIDHLASTVDLGSKDDNDDLLIPVDQEINLHAQDEYTAMRPWPCDFCSRRFRKKAALMNHMVAHQNDRPHACNLCGVRYVRKCDLMNHLKVHAFVPDDADSMDFEEILENNQIVKPKKKRGRRKKIPPPEEDEWENMTSARTQQWSRRGRSPAKPPPSPPPMSPPSPPSPPSPPSPPSPPPPPADPSRPFVCITCGIGFAREKALKSHSRVHGGDSPVECSECGELCWSREGLSNHMLQKHPLVVPRATQEANYNDSDSDDDMEYRLSPESAPSGGHERERPVYDNTRGPELFCPDCGVAFQRADLLRRHVAAAHSYKRRVSGSWGEHRCEVCGEACSDALQLLAHAELHHDRVAPPHRLKRPKGHSSTSISLSGKQFPCRECGKVFGSRSSQQIHIRIHTGERPYACRFCWKAFADGGTLRKHERIHTGEKPYACAVCPRAFNQRVVLREHVRSHHSAPDRRQQANGGPAYSCVVCSRTLHTSPELVQHLIQHCDANTALKRQPQNGPRKYKRRRKIKSEVSPARREWATPSPPPQSPSPNASPAPSPPPASPPRRRSRREPVARPKMIHTSEETRKVKGKSVRQRRPPRHPADDLRAIGNHPHSLKQEPKSEADSPKPSPVPSPVPSPVPSPVPSPQPDETEKIDEGGPYKCEMCSFEFPRRSALLLHVPVHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00703284;
90% Identity: iTF_00699484;
80% Identity: -