Basic Information

Insect: Eupithecia subumbrata
Gene Symbol: -
Assembly: GCA_949316285.1
Location: OX438637.1:2828139-2833891[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.37 32 6.2 0.2 1 23 79 102 79 102 0.94

2 17 0.031 2.6 9.6 0.9 3 23 175 195 173 195 0.96

3 17 0.0014 0.12 13.8 0.2 1 23 199 221 199 221 0.97

4 17 0.025 2.2 9.8 0.1 1 23 228 251 228 251 0.94

5 17 0.02 1.7 10.2 1.1 2 23 259 281 258 281 0.92

6 17 3.5e-06 0.0003 22.0 0.5 2 23 287 309 286 309 0.96

7 17 1.4 1.2e+02 4.3 0.6 1 23 315 338 315 338 0.92

8 17 0.00021 0.018 16.4 3.9 1 23 344 367 344 367 0.98

9 17 3.2 2.7e+02 3.2 0.4 3 23 858 879 856 879 0.88

10 17 0.0012 0.1 14.0 5.5 1 23 901 923 901 923 0.98

11 17 0.00061 0.052 14.9 0.3 1 23 927 949 927 949 0.95

12 17 0.69 59 5.3 4.6 1 14 954 967 954 981 0.88

13 17 9 7.7e+02 1.8 2.4 2 23 985 1007 984 1007 0.90

14 17 5.6e-06 0.00048 21.3 4.0 2 23 1015 1037 1014 1037 0.97

15 17 4.9e-05 0.0042 18.4 2.4 1 23 1043 1065 1043 1065 0.99

16 17 7.3e-06 0.00062 21.0 1.6 1 23 1072 1094 1072 1094 0.98

17 17 0.0011 0.091 14.2 0.1 1 23 1101 1124 1101 1124 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.37	32	6.2	0.2	1	23	79	102	79	102	0.94
2	17	0.031	2.6	9.6	0.9	3	23	175	195	173	195	0.96
3	17	0.0014	0.12	13.8	0.2	1	23	199	221	199	221	0.97
4	17	0.025	2.2	9.8	0.1	1	23	228	251	228	251	0.94
5	17	0.02	1.7	10.2	1.1	2	23	259	281	258	281	0.92
6	17	3.5e-06	0.0003	22.0	0.5	2	23	287	309	286	309	0.96
7	17	1.4	1.2e+02	4.3	0.6	1	23	315	338	315	338	0.92
8	17	0.00021	0.018	16.4	3.9	1	23	344	367	344	367	0.98
9	17	3.2	2.7e+02	3.2	0.4	3	23	858	879	856	879	0.88
10	17	0.0012	0.1	14.0	5.5	1	23	901	923	901	923	0.98
11	17	0.00061	0.052	14.9	0.3	1	23	927	949	927	949	0.95
12	17	0.69	59	5.3	4.6	1	14	954	967	954	981	0.88
13	17	9	7.7e+02	1.8	2.4	2	23	985	1007	984	1007	0.90
14	17	5.6e-06	0.00048	21.3	4.0	2	23	1015	1037	1014	1037	0.97
15	17	4.9e-05	0.0042	18.4	2.4	1	23	1043	1065	1043	1065	0.99
16	17	7.3e-06	0.00062	21.0	1.6	1	23	1072	1094	1072	1094	0.98
17	17	0.0011	0.091	14.2	0.1	1	23	1101	1124	1101	1124	0.98

Sequence Information

Coding Sequence: atggccaagtccgaaaccacAGCGAGTAAAAACCGAAAGCTGACAATAACCGTAAAGAGAGAGCGAGAGGATAAATTGCATAAAGCAGAATTAAAACAGTCCTTTAAACTGCGGGAGGGAAAGAGTCCGAAAGAAGAAAAGAGTCTACCAGAGATGAAAAAGCATTGTCACAATCTGACGACGATACTCAACTGTTCAAATGCGACGCCATTCAAAGACAGGAACGATGCTGGATACATTTGCGCGTACTGCTACGAGTCGTACCCTGATCCAGTGATCCTTCGAGCCCACACGCACTCCGACCATCAGGACGAAAAGAGGACATACAAGGCCGGATCAGCTCTCAACAACTTCATCGCCTATCTAGACATCGTCGATCTGAAATGCACGCTGTGTGACTCACCCAAACCGGATCTCAAAACCTTAATCGAGCATTTGGTCGCGGTCCATCAGAAGGAGTACTACCTCGGGGAGACAGATTACTTCGTCCCCTTTAAACTCACAGAAGAAATACAGATCAACTGCTGCTTGTGCGACGAGCCGTACTTTAACATGAAGTTGCTAATGCAGCATATGAATATCCACTACAGAAACTTTATCTGTACGATTTGCGGGGCTGGTTTCGTCAACAGTTTCAGGCTTCTAAGGCATGAGACGACGCATGAAAAGAAGAAATCTAGCTTCCCTTGCAAACAATGCGGTGCTGTGTTCTCCGCTGATTCAAAACGGAAGGCTCACATCAACGAAGATCACAAAGGTATAGCTGGTGATAGCGTTTGCAGAATCTGCAAAGCCCGCTTTAAGAACTACTACCAGAAAACTAGACACATGGTCCAAGTTCATAACGCTGAGGGGGTTAAATGCGAGGTCTGCGAAAAGACGTTCAATCTCAAATCCAATCTCATCTCGCACATGAGGAACGTGCACCTGAAAGAACGCCCATATGAATGCTCCGTTTGCAGCATGGGCTTCTTTATTAAAAGGCAGATGCTGTACCATTACATGGCGACGCACACCAATGAGAGGAATTTCAAATGTGATGTGTGCGGGAAGGCTTATGCGACGCAGTGTAGTAAGAGGAAGCATATGAAGAAGAATCATGGTATAGTAccgaGTCTTGCTTCAAAAAGTCGTGGAGCAAAAAGCACAGTAAGTACTAAATTTAATCGGAATGATAAATCAGAAAATAAATCTGATGCGAAAAGTGGCAATAACACGAATTGTTCCAAAcgagacaaaaataaagcgtCTGAAAATATCGATGAAAACGGTCCTGAAAGGGCTAAGAGAATTGAAAACAAAAACAGGTCTAGAAAAGATGATGTAGGTGGTGATAAAAAGGACAGGTACGAAAACAGGAAAAATTATGAGCGACCGAGTGTGATTGTTGTAAATAaagaaagcaaaaaaaaaacactacatGGCGATGTGATCGTAGTCAATGGCGATAAAAAACAAAGGTCTGTTAGTTGTAAAAAATCTTGGAGCAACGGACGAGACGATGCTCTTGATGATTTATTTGCACCTGATCctgtaaataaaattagcaagaAAAGGTCTAGACATGATGATGACGATAATAATAATCAGGTTCAGGAAAAAAAACGTTCTAAAAACGATGAAAATAACGTTGATAAAAAGTCGAACGGCAAGGAGAGGTCTAAGAAAGATCCAGATAATGTTGAGAAAAATTCTGCAAGCAGGGAAAGATCTAAGAAAGATCCAAATATTGTTGAGCATAGGTCTAAAAGCAGGGAAAGATCCAGGAGCCGGGGTCCAGTTGCTGAGAAAAAGATTAAGTTTTTCAGACCTTTTCTTGATGAAGATGAGGAAGACTATGTCAAGAAGAAAGAGAGGTCTAAAAGTATAGAAAGGTCTGATAAAAGTGTGACTGAAGACTATGACAAGAAGAAAGAGAGGTCTAAAAGTAGAGAAAGGTCTGATAAAAGTGGGACTGAAGACTATGACAAGAAGAAAGAGAGGTCTAAAAGTAGAGAAAGGTCTGATAAAAGTGTGTCTGAAGACTATGACAAGAAGAAAGAGAGGTCTAAAAGTAGAGAAAGGTCTGATAAAAGTGTGTCTGAAGACTATGACAAGAAGAAAGAGAGGTCTAAAAGTAGAGAAAGGTCTGATAAAAGTGTTAGTGGAGAATCTTCATCATCTCATAGCAAGAATAAAGGTGAGAGCAAGAATGGACCAAAAGAACGTAGTAATAAAGCTAAGGATGACAAAACTAAGAAGACAACAAAGAAAGATGTTGATACTGTTACATTAATGACACGAATGAAAAGAGCCGGAAACCAAAAACATTTACTATCGGAGTTGCCAACAATTGAGCTCGATAAACATCTGCACAATATACGTACGATACTATTAAATTCTAACGCAACTCCCATACAAAACCATGACGAAACTGGCTTCACTTGCGGCTTCTGCGTCTCACAATTCCTTTCAGCCGCTGACCTTAAAATACACACACTAGATGACCATGATGATGACTACATCGAGAGATTTATGGTTGGAGCTAAAATGTATGCCTATGTCGTCAAATTGGACATAACCTCACTCCGCTGCATTATGTGCACTCGGAAAATATTTACTCTAGAAAACCTCATTGAACATCTAGAGACCAAACACAACAAAATGTTTCATAAGGATATAAAAAATCACATCCTCCCTTTCAAATTCCAAAGCGATGTATTTACCTGCGTTATTTGCGATCGCAAGTTTGATCGTTTCAAACATATGCAGCATCACATGAGCGTCCACTACAAGAACTATCTCTGCGACGAATGCAACGCACCTTTCATCAACAAAGCAACCCTCCGAACTCATTTATACAGACATACATATGCGGTATTCAAATGCGATTTCTGCGGAAAAGCCTTCGATACAAAGGTCAAGTGTTCCACTCACGAGATCTGTGTACACATGAAAGGCCACAGCCGCCAGAAATGCACCTACTGCATGCAAACTTTCGTGAAATACAGAGAGAAACATCAACACATGGTTGAAGTTCACGGCCACAAACAACGCACAATAAAATGCAATATTTGCACCAAGACTTTCAAAAGCAAGGAGAAGTTAACAAAGCACCGCAGAAGATACCATCTCTTGGAGCGTAACTACGTGTGCGACCAGTGCGACAGCCGTTTCTTCGACAACTACGATCTGAAGCGTCACAAACGCACCCACGATAATTCGAAGCAGCTGTTTGAATGCACGATCTGCGATAGGAAGTTCACCAGACGTGATAATATGTTAGAGCACAGGCGTCTACACAATCAGGAGTATAGGAAGTTCACTTGTGAAACGTGCGGGTTGAATTATGCTAGTTTGGCCCGTCTCAACGAACATATAAGAAGGGTGCATAAGAAGCCTAGGGTAgccaaaccaaaaaaaaaagagaaaaccaAGAAGTAA
Protein Sequence: MAKSETTASKNRKLTITVKREREDKLHKAELKQSFKLREGKSPKEEKSLPEMKKHCHNLTTILNCSNATPFKDRNDAGYICAYCYESYPDPVILRAHTHSDHQDEKRTYKAGSALNNFIAYLDIVDLKCTLCDSPKPDLKTLIEHLVAVHQKEYYLGETDYFVPFKLTEEIQINCCLCDEPYFNMKLLMQHMNIHYRNFICTICGAGFVNSFRLLRHETTHEKKKSSFPCKQCGAVFSADSKRKAHINEDHKGIAGDSVCRICKARFKNYYQKTRHMVQVHNAEGVKCEVCEKTFNLKSNLISHMRNVHLKERPYECSVCSMGFFIKRQMLYHYMATHTNERNFKCDVCGKAYATQCSKRKHMKKNHGIVPSLASKSRGAKSTVSTKFNRNDKSENKSDAKSGNNTNCSKRDKNKASENIDENGPERAKRIENKNRSRKDDVGGDKKDRYENRKNYERPSVIVVNKESKKKTLHGDVIVVNGDKKQRSVSCKKSWSNGRDDALDDLFAPDPVNKISKKRSRHDDDDNNNQVQEKKRSKNDENNVDKKSNGKERSKKDPDNVEKNSASRERSKKDPNIVEHRSKSRERSRSRGPVAEKKIKFFRPFLDEDEEDYVKKKERSKSIERSDKSVTEDYDKKKERSKSRERSDKSGTEDYDKKKERSKSRERSDKSVSEDYDKKKERSKSRERSDKSVSEDYDKKKERSKSRERSDKSVSGESSSSHSKNKGESKNGPKERSNKAKDDKTKKTTKKDVDTVTLMTRMKRAGNQKHLLSELPTIELDKHLHNIRTILLNSNATPIQNHDETGFTCGFCVSQFLSAADLKIHTLDDHDDDYIERFMVGAKMYAYVVKLDITSLRCIMCTRKIFTLENLIEHLETKHNKMFHKDIKNHILPFKFQSDVFTCVICDRKFDRFKHMQHHMSVHYKNYLCDECNAPFINKATLRTHLYRHTYAVFKCDFCGKAFDTKVKCSTHEICVHMKGHSRQKCTYCMQTFVKYREKHQHMVEVHGHKQRTIKCNICTKTFKSKEKLTKHRRRYHLLERNYVCDQCDSRFFDNYDLKRHKRTHDNSKQLFECTICDRKFTRRDNMLEHRRLHNQEYRKFTCETCGLNYASLARLNEHIRRVHKKPRVAKPKKKEKTKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -