Basic Information

Insect: Eupithecia subumbrata
Gene Symbol: -
Assembly: GCA_949316285.1
Location: OX438637.1:2838632-2848029[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 33 0.092 7.8 8.1 0.1 3 23 56 77 54 77 0.92

2 33 0.0024 0.21 13.0 2.0 2 23 149 170 148 170 0.96

3 33 0.0056 0.48 11.9 0.1 1 23 174 197 174 197 0.96

4 33 0.0015 0.13 13.7 1.8 1 23 229 252 229 252 0.98

5 33 3e-05 0.0026 19.0 1.8 2 23 260 282 259 282 0.96

6 33 1.8e-05 0.0015 19.7 3.2 1 23 288 310 288 310 0.98

7 33 0.00013 0.011 17.0 0.4 1 23 316 338 316 338 0.98

8 33 2.2 1.9e+02 3.7 5.4 1 23 439 462 439 462 0.94

9 33 0.54 46 5.6 0.1 2 23 489 513 488 513 0.92

10 33 5.2 4.4e+02 2.6 4.0 1 23 535 557 535 557 0.97

11 33 1.7 1.5e+02 4.1 0.3 1 23 561 584 561 584 0.88

12 33 0.0015 0.13 13.7 1.5 1 23 590 612 590 612 0.98

13 33 0.062 5.3 8.6 3.8 1 23 618 641 618 641 0.96

14 33 0.008 0.68 11.4 0.2 2 23 649 671 648 671 0.96

15 33 0.00028 0.024 16.0 2.9 1 23 677 699 677 699 0.97

16 33 9.4e-07 8e-05 23.8 0.5 2 23 706 727 705 727 0.97

17 33 0.24 20 6.8 2.4 1 22 733 754 733 754 0.96

18 33 0.043 3.7 9.1 1.7 1 23 936 959 936 959 0.94

19 33 0.093 8 8.1 0.0 2 23 988 1010 987 1010 0.95

20 33 0.14 12 7.5 0.5 2 23 1033 1054 1032 1054 0.96

21 33 0.0041 0.35 12.3 0.1 1 23 1058 1080 1058 1080 0.95

22 33 0.085 7.2 8.2 2.9 1 23 1085 1108 1085 1108 0.96

23 33 0.83 71 5.1 7.0 3 23 1231 1251 1229 1251 0.96

24 33 1.5 1.3e+02 4.3 0.0 2 23 1278 1300 1277 1300 0.94

25 33 0.003 0.25 12.8 0.1 2 23 1502 1524 1501 1524 0.95

26 33 0.0005 0.043 15.2 2.7 2 23 1547 1568 1546 1568 0.98

27 33 0.016 1.4 10.5 0.1 1 23 1572 1594 1572 1594 0.95

28 33 9.8e-06 0.00083 20.6 1.7 1 23 1599 1622 1599 1622 0.97

29 33 0.64 54 5.4 3.9 2 23 1629 1651 1628 1651 0.94

30 33 0.018 1.5 10.3 0.7 3 23 1660 1681 1658 1681 0.95

31 33 0.0001 0.0089 17.3 1.1 1 23 1687 1709 1687 1709 0.98

32 33 2.7e-06 0.00023 22.4 3.6 1 23 1715 1737 1715 1737 0.99

33 33 0.007 0.59 11.6 3.3 1 23 1743 1766 1743 1766 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	33	0.092	7.8	8.1	0.1	3	23	56	77	54	77	0.92
2	33	0.0024	0.21	13.0	2.0	2	23	149	170	148	170	0.96
3	33	0.0056	0.48	11.9	0.1	1	23	174	197	174	197	0.96
4	33	0.0015	0.13	13.7	1.8	1	23	229	252	229	252	0.98
5	33	3e-05	0.0026	19.0	1.8	2	23	260	282	259	282	0.96
6	33	1.8e-05	0.0015	19.7	3.2	1	23	288	310	288	310	0.98
7	33	0.00013	0.011	17.0	0.4	1	23	316	338	316	338	0.98
8	33	2.2	1.9e+02	3.7	5.4	1	23	439	462	439	462	0.94
9	33	0.54	46	5.6	0.1	2	23	489	513	488	513	0.92
10	33	5.2	4.4e+02	2.6	4.0	1	23	535	557	535	557	0.97
11	33	1.7	1.5e+02	4.1	0.3	1	23	561	584	561	584	0.88
12	33	0.0015	0.13	13.7	1.5	1	23	590	612	590	612	0.98
13	33	0.062	5.3	8.6	3.8	1	23	618	641	618	641	0.96
14	33	0.008	0.68	11.4	0.2	2	23	649	671	648	671	0.96
15	33	0.00028	0.024	16.0	2.9	1	23	677	699	677	699	0.97
16	33	9.4e-07	8e-05	23.8	0.5	2	23	706	727	705	727	0.97
17	33	0.24	20	6.8	2.4	1	22	733	754	733	754	0.96
18	33	0.043	3.7	9.1	1.7	1	23	936	959	936	959	0.94
19	33	0.093	8	8.1	0.0	2	23	988	1010	987	1010	0.95
20	33	0.14	12	7.5	0.5	2	23	1033	1054	1032	1054	0.96
21	33	0.0041	0.35	12.3	0.1	1	23	1058	1080	1058	1080	0.95
22	33	0.085	7.2	8.2	2.9	1	23	1085	1108	1085	1108	0.96
23	33	0.83	71	5.1	7.0	3	23	1231	1251	1229	1251	0.96
24	33	1.5	1.3e+02	4.3	0.0	2	23	1278	1300	1277	1300	0.94
25	33	0.003	0.25	12.8	0.1	2	23	1502	1524	1501	1524	0.95
26	33	0.0005	0.043	15.2	2.7	2	23	1547	1568	1546	1568	0.98
27	33	0.016	1.4	10.5	0.1	1	23	1572	1594	1572	1594	0.95
28	33	9.8e-06	0.00083	20.6	1.7	1	23	1599	1622	1599	1622	0.97
29	33	0.64	54	5.4	3.9	2	23	1629	1651	1628	1651	0.94
30	33	0.018	1.5	10.3	0.7	3	23	1660	1681	1658	1681	0.95
31	33	0.0001	0.0089	17.3	1.1	1	23	1687	1709	1687	1709	0.98
32	33	2.7e-06	0.00023	22.4	3.6	1	23	1715	1737	1715	1737	0.99
33	33	0.007	0.59	11.6	3.3	1	23	1743	1766	1743	1766	0.98

Sequence Information

Coding Sequence: ATGAAAGCAAAAGAGAATATAGataatCAAGAAAACGCGACAGGAAATCCAAAATTCAGCAAACCTGATCCCGAAGAAATGGAAATGCAGAAACACAATGTTAAACAGATAGTACTGTACTCGAACGCGACGCCACTATCACGTCATACAGATTTAGGCTACGGGTGCGCTTTTTGCCCTGAATACTATCAAAAACCTTCCGATCTAAAGAAACATATACTAGATTACCACGATAAAAACACTAGAGCTACCTTTATGAGTAAACCACGCTTTGGATCAGGAAGCTACGTGGTCAAACTCGACGTAACAAACCTTAAATGTGTTCTATGCAAAAGAGATATCGAATACGTTTACCTTAAAGAACATCTTGAGAAACATGGAAGATATATTCACGACCTTTCTAAGAGTTACACAATACCGTTCAAATTTAATGACGATATTCTCAAGTGTATGTTCTGTAATCAAGTTTTCAGATCATTCAAAACACTACAAATGCATATGAACGAGCATTATAAGAACTATGAATGTCCCGTCTGTGGTGTAGGATTCATAAACCAACTGATGGTCAAAACTCATTACAAAAACTCGCATAAAATCGGAGTTTTCGCTTGCAGCTGCGGAGGACTTTTCGATACCATCAATAAGAAGAAATTGCACGAAATACATGCTCACAGTAAACATAAATACAAATGCGGTTACTGCGATCAGTTCTTCAAGTCGTCTGATAAGAAACGCATGCATTTAATCACCGTACATAATGTAAATTTCCCATCAATTCAGTGCAACTTATGTGATAAACAGTTTACAAAACAAAGTCATCTTGCCATCCACGTAAAGAAAGATCACAATAAAGAGACGCGGTTCACATGCTCTTACTGCAAGAAGGCTTTCTTCTACAAATCTCAACTGAACTTACATATGATCAAACACTTGCAGACGAAAGATTTCAAGTGTGAAATTTGCAGTAAAGACTTTGCGAGAATGAAAGCTTTGAAAGAGCATGTTAAAATACATGTTGGAGTTTTTGAATATCgtGTCCTCACAGACTACAAACCCATAAAACTGGAAGTTGAATGGGATTTAGAAACAAGCTTGGAAATTACAAGTATTAAAGAAGAGAGTTCATCTTCAGATGATAAAAAGAAAAGAGGTAAACGAGGGAAAAAGAGAAAAGTCGATAACTTCAGACCGCTTAAGATTAAACCACCCGCAAAAGCTGAGGTTTTAGACGTGGAAAAACATAGATACAACGTTCGGACGATATTACAATACTCCAATGCAACGCCTATTAGAGCGCACTACGCAGGGAATGGATACGCTTGCTGCTTCTGCAAACAGTACTTCCACAAAGCATCAGAACTCAAGGAGCACACGCTCCAATCTCACGACGAACAAACCAAAAAGAAATATATGCAGAAGGCTTTCCTATTCAAGCTTTTTGTCAAACTTGATATTACATTACTTCGTTGTACAGTTTGCTCAGCTGATATTACATTTGATACTCTCGAACAACTCATAGAACATTTGAACTCGGCACATCAAAAAGGAATACATACGGATATTAAGAATCAAATCATGTGTTTTAAGTTAGATGAGGAAGTTTTTCGGTGTTTCATCTGTTCAGTTGAATATCACAGCTTCAAAAATTTACTTGAACATGCACATTCGCACTATAGGAACTTTATATGCGAGACATGCGACGCCGGCTTTATAAACAGACTTAAATTATACGGACACGTCTACAACAAGCATAAAGGCGCAGGTTCCCATAAATGCAACACTTGCGCGAAAATTTTCGATACtcccataaaattaaaaacccacGAAAGAATACATTTAGGTACAGTTCTCTACAAATGCCACGAATGCAACGACAAGTTCACGAAGAAGAAAGAGAAGAGAGATCACATGATAAACGTACACGGAGCTAAATTCGCCAGGATCAAATGCACAGCTTGCGACAAGCTGTTTATAAGTAAAGCCTCGCTAAGCGTCCACGTAAACAGAGACCACTTGATGGATAGGCGACACCAGTGCGAGCTTTGCGAAAAGACCTTCTTCACATCATCGTTCTTAAGAGATCACATGGTATCTCACTCTAGGGTTAGAGAGATCCAATGCGATGAATGCCCGAAAACGTTTGCGAGGAAGAAAGCGTTACGTGAACATATGAAGTCTCACACTGGGGATCGTCGGTTCAAGTGCACATTCTGCGACATGGCTTTCCTCCAGAAGTGTAGCTTGAAAGGGCACTTGAGAAGTATCAACGTCAGAGACCACAAAGCAATCAAATCGGAGGTAGGAAACTCTTGGGGCGTTACTATTGTTAAAGTAAAAGGTCCTAATACTGAAAATCCCGTAATTGCCGTTACTAAagtaaaaactaataaaaaatctaaacaaaaagATCGGAAATCAGAAGACATTGAAGTGAAATCAAAGAAATTTAATATCGAACAATTATCTATTTGTCAGAAACCCTTTGATCTATCGGCTGAAAACAAACCTAATGCGTCCAAAGAAGCTAAATCCCCAGCagctttaaaaatcaaaattaaccCACCACCCGatataataattaaacaatTTAAACCTAAAACCGACGAAATTAAACCTAAAGAGGCCAAATTAAAACcgcaaaagaaaaaagaacCCCTAAAAATCGACGCACCAATCCAAAGAATGAAAATAGTCCCTCCACCAGACATGGACTTTATGATGGAGCTGGACAAGCACAGATTCAACATACGCACCGTTATgcaatactcaaacgcaacccCAATTAGAAACCACGTTAAAAGCGGTTTCGTTTGCTGCTTCTGCGACGCTCACTTCCCCAAACCAGCAGACCTAAAAATTCACACTATCCAAACCCATACAGACGATGAAAGCAAAGACAAGTTCTTTCGTAAGAAAGCAGTCTTATACTCATTCATGGTAAAACTAGATATAACGCATCTAGTTTGCAATATCTGCCAAATTGCTATAGAAACGCTCGAGCAGCTTATATCCCACCTCAACAGTATCCACCAGAAAAACTTACACACAGATATAAAGAACCACATTGTCTGCTTCAAATTCGACAGCGAAATGATGAGATGTCTCGTTTGCGCTCAAGAATTTAACAGCTTCAAATTGCTATCTGAACACATGAACCAGCATTATACAAACTTCGTTTGCGATGAGTGCGGTGCTGGGTTTATCAACAGGAGACAGTTGCTCCTACACTCTGATAAACATAAAGTTGGGGAACACAAATGTGGGTCTTGTGATAAGGTATTTCAATCTCTAAAGAGGATGAAGACCCACGAACGTGTCACGCACGTGTATAACTCGGGTTTAGGCACGCACGGCTTTAGATGCCAACTTTgtAAGAACGCGAGTGACGTCAAATCCATTATACAAGAACTAACGTCTAGTTCTTGGCAAGTAACTATCGTTAAAGTCGACGAATCACCGACAGTTCAAAAACTACCCAAGACAATGATACAAAAACCTGACGTAACAACCATCAACGGAATGAAATTTGGAGACATGAAGAAACCTATTTCTTTTGTTAAGAAAGCTAAACCAGTAGTACAAGTGCAAGAAACTTCTGAACTTGACAAACAGAGATTTAACATTCGGACTATATTGCAGTTTTCCAATGCAACGCCAATACGAACGCATTCAATATCAACCGGCTACGGCTGctgtttttgcaaaaaatactTCCATAAAGCTTCCGACCTCAAAACTCATACTAAAAACCACGACGAAGAAGCCAAAACAAAATTCATGAAGGGAGCCACATTGTTTACATTCCTGGTGAAATTAGACGTAACTGCATTATCCTGCAACATTTGCAAAGCATCAATGGATAACATAGATGAACTGATGGAGCATCTAAATAATGCACACGATAAAAGACTGTAtactgaattaaaaaaatacgtggTCAGCTTTAAACTGCCCACCGATGATGTCATGAAATGTATCGTCTTCATTGACAACAAAACGATTAAAAAAGAAGTAATTGAATCTGGACATTCTGAAGTTGAGCCAAAAGTTGAAGACTTGTGCGTTACCGAAGTAAAAGCCGTCAGAAAATCGCGGAAGACAGAAATCAGAAAGAAAGAATCTTCCATTCgaagaactaaattaaaagcAATACCAATTTATGCTGCGGCTATAAAGGGGATAAGAATTAAACCACCATCAAAGCCACGTCTTCCGTCTCGCAGTGTCAAAATAGAACCGGCAATGGAAAGTCCTCCAGAGCAGATGGAGATTGAAAAACAGAGACATAACATTCGAACAATACTGTTAAACTCTAACGCGACGCCAATCAGAAAGCACTTCGTCGGTAGCGGATACAACTGCTGTTTCTGCATGGCAAGTTACCCAATTCCGGCCGACCTGAAAGCGCATACAATAAACGAACACGACaaacaaactaaaaacaaattCATGAAAAATATACGTTTATATTCTTACATAGTAAAACTAGATATCACTTCACTTAGCTGTAATATTTGCAATAAAACTCTAGATACGATAGACCAACTGATCGACCACCTAAATAGCATACATCAGAAGGGAATACACAGAGATGTTAAAAGCTACTATGCCTGCTTTAAATTCAATGGCGAAGAGACGAAATGTCACATCTGCTCAGCTGTATTTCGAAGCTTCAAACTTTTACAGGAGCACATGAACAAGCATTGCATGAATTTTATATGTGACGAGTGCGGTGTCGGATGTATCAATCGAGGGCAGTTGAAATTGCATTCGGCTGTGCACGAATCGGGCGCGTACAAATGCAGTACCTGCGAAAAGGTTTTCAAATCTCTGGCTAACTTACAATCGCACACGCGACAAACTCATTCTACGATACCAGTTAACAAATGTCACCTGTGCGAAGGCAGATTCAAAACTAACAGAAACAAACGAAACCACCTGACACAAGTTCACGGGATGGTCTTCCCCGATCTCGCATGCGACGCTTGCAACCGCACTTTCAAAACTGTGAACTCCCTTTCTGTTCACAAGAAGAAGGACCATTTGATGGAGCGTCGTTACAAATGTTTGATTTGCGAGCGAACGTTCTTCACGTCGAGCATGTTGAAAGATCACGAGATAACGCATACGGGAGTAAGGGACTATAAATGTGATATTTGCTCGAAGACATATTCGAGGAGGCACGGGCTAAGGGAGCACATGAGATCACACACCGATGACCGACGATTCAAGTGTTCTTACTGCGGCATGGCATTCCTGCAAAAATGTAGTCTAAAAGGACACTTGCGTAGTCGACACGATGCTGTACtacagtaa
Protein Sequence: MKAKENIDNQENATGNPKFSKPDPEEMEMQKHNVKQIVLYSNATPLSRHTDLGYGCAFCPEYYQKPSDLKKHILDYHDKNTRATFMSKPRFGSGSYVVKLDVTNLKCVLCKRDIEYVYLKEHLEKHGRYIHDLSKSYTIPFKFNDDILKCMFCNQVFRSFKTLQMHMNEHYKNYECPVCGVGFINQLMVKTHYKNSHKIGVFACSCGGLFDTINKKKLHEIHAHSKHKYKCGYCDQFFKSSDKKRMHLITVHNVNFPSIQCNLCDKQFTKQSHLAIHVKKDHNKETRFTCSYCKKAFFYKSQLNLHMIKHLQTKDFKCEICSKDFARMKALKEHVKIHVGVFEYRVLTDYKPIKLEVEWDLETSLEITSIKEESSSSDDKKKRGKRGKKRKVDNFRPLKIKPPAKAEVLDVEKHRYNVRTILQYSNATPIRAHYAGNGYACCFCKQYFHKASELKEHTLQSHDEQTKKKYMQKAFLFKLFVKLDITLLRCTVCSADITFDTLEQLIEHLNSAHQKGIHTDIKNQIMCFKLDEEVFRCFICSVEYHSFKNLLEHAHSHYRNFICETCDAGFINRLKLYGHVYNKHKGAGSHKCNTCAKIFDTPIKLKTHERIHLGTVLYKCHECNDKFTKKKEKRDHMINVHGAKFARIKCTACDKLFISKASLSVHVNRDHLMDRRHQCELCEKTFFTSSFLRDHMVSHSRVREIQCDECPKTFARKKALREHMKSHTGDRRFKCTFCDMAFLQKCSLKGHLRSINVRDHKAIKSEVGNSWGVTIVKVKGPNTENPVIAVTKVKTNKKSKQKDRKSEDIEVKSKKFNIEQLSICQKPFDLSAENKPNASKEAKSPAALKIKINPPPDIIIKQFKPKTDEIKPKEAKLKPQKKKEPLKIDAPIQRMKIVPPPDMDFMMELDKHRFNIRTVMQYSNATPIRNHVKSGFVCCFCDAHFPKPADLKIHTIQTHTDDESKDKFFRKKAVLYSFMVKLDITHLVCNICQIAIETLEQLISHLNSIHQKNLHTDIKNHIVCFKFDSEMMRCLVCAQEFNSFKLLSEHMNQHYTNFVCDECGAGFINRRQLLLHSDKHKVGEHKCGSCDKVFQSLKRMKTHERVTHVYNSGLGTHGFRCQLCKNASDVKSIIQELTSSSWQVTIVKVDESPTVQKLPKTMIQKPDVTTINGMKFGDMKKPISFVKKAKPVVQVQETSELDKQRFNIRTILQFSNATPIRTHSISTGYGCCFCKKYFHKASDLKTHTKNHDEEAKTKFMKGATLFTFLVKLDVTALSCNICKASMDNIDELMEHLNNAHDKRLYTELKKYVVSFKLPTDDVMKCIVFIDNKTIKKEVIESGHSEVEPKVEDLCVTEVKAVRKSRKTEIRKKESSIRRTKLKAIPIYAAAIKGIRIKPPSKPRLPSRSVKIEPAMESPPEQMEIEKQRHNIRTILLNSNATPIRKHFVGSGYNCCFCMASYPIPADLKAHTINEHDKQTKNKFMKNIRLYSYIVKLDITSLSCNICNKTLDTIDQLIDHLNSIHQKGIHRDVKSYYACFKFNGEETKCHICSAVFRSFKLLQEHMNKHCMNFICDECGVGCINRGQLKLHSAVHESGAYKCSTCEKVFKSLANLQSHTRQTHSTIPVNKCHLCEGRFKTNRNKRNHLTQVHGMVFPDLACDACNRTFKTVNSLSVHKKKDHLMERRYKCLICERTFFTSSMLKDHEITHTGVRDYKCDICSKTYSRRHGLREHMRSHTDDRRFKCSYCGMAFLQKCSLKGHLRSRHDAVLQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00703240;
90% Identity: -
80% Identity: -