Esub009682.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Eupithecia subumbrata
Gene Symbol
-
Assembly
GCA_949316285.1
Location
OX438637.1:1564973-1580956[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 43 0.053 4.5 8.8 0.7 1 23 33 56 33 56 0.93
2 43 0.033 2.8 9.5 0.5 3 23 88 109 86 109 0.94
3 43 0.53 45 5.7 0.7 2 23 132 154 132 154 0.95
4 43 0.0067 0.57 11.7 2.7 1 23 159 182 159 182 0.97
5 43 2.5 2.2e+02 3.5 0.1 1 23 187 210 187 210 0.89
6 43 0.00061 0.052 14.9 1.0 1 23 215 238 215 238 0.94
7 43 0.00057 0.048 15.0 0.4 2 23 246 268 245 268 0.97
8 43 0.23 20 6.8 0.0 2 23 275 296 274 296 0.96
9 43 8.9e-07 7.6e-05 23.9 0.6 1 23 302 324 302 324 0.96
10 43 1.1e-05 0.00093 20.4 2.1 1 23 330 353 330 353 0.95
11 43 2.5 2.1e+02 3.6 2.4 1 23 479 500 479 500 0.96
12 43 0.21 18 7.0 0.3 3 23 577 598 575 598 0.94
13 43 0.00058 0.05 15.0 0.5 1 23 603 626 603 626 0.93
14 43 0.89 76 5.0 7.5 1 23 629 652 629 652 0.95
15 43 0.0016 0.14 13.6 0.6 1 23 658 681 658 681 0.94
16 43 0.011 0.91 11.0 0.6 2 23 689 711 688 711 0.95
17 43 0.11 9.1 7.9 0.6 1 23 716 738 716 738 0.98
18 43 1.1e-06 9.7e-05 23.5 0.2 1 23 744 766 744 766 0.98
19 43 0.027 2.3 9.8 0.5 1 23 840 862 840 862 0.98
20 43 1.4 1.2e+02 4.3 0.1 2 23 888 910 887 910 0.93
21 43 0.6 51 5.5 0.1 3 23 934 955 932 955 0.93
22 43 0.00028 0.024 16.0 0.2 3 23 963 984 962 984 0.97
23 43 0.0029 0.25 12.8 0.6 3 23 991 1012 990 1012 0.95
24 43 0.021 1.8 10.1 2.3 1 23 1018 1041 1018 1041 0.98
25 43 0.0022 0.19 13.2 2.2 2 23 1048 1070 1047 1070 0.95
26 43 0.047 4 9.0 1.3 1 23 1076 1098 1076 1098 0.94
27 43 0.03 2.6 9.6 1.2 1 23 1104 1127 1104 1127 0.89
28 43 0.031 2.6 9.6 0.4 1 22 1175 1196 1175 1198 0.89
29 43 1.3 1.1e+02 4.4 0.1 2 23 1225 1247 1225 1247 0.94
30 43 1 90 4.7 0.1 3 23 1271 1292 1269 1292 0.91
31 43 0.12 11 7.7 0.0 1 23 1296 1319 1296 1319 0.95
32 43 0.0046 0.39 12.2 3.0 2 23 1323 1345 1322 1345 0.95
33 43 0.26 22 6.7 0.3 2 23 1350 1372 1349 1372 0.93
34 43 0.02 1.7 10.2 1.0 2 20 1380 1398 1379 1400 0.92
35 43 0.015 1.3 10.5 0.5 2 23 1495 1517 1494 1517 0.93
36 43 4.8 4.1e+02 2.7 1.7 2 23 1540 1562 1539 1562 0.91
37 43 0.0016 0.14 13.6 0.1 1 23 1569 1592 1569 1592 0.94
38 43 0.0055 0.47 11.9 2.0 2 23 1598 1620 1598 1620 0.97
39 43 0.0076 0.65 11.5 0.1 2 23 1626 1648 1625 1648 0.95
40 43 0.006 0.51 11.8 0.9 1 23 1655 1678 1655 1678 0.96
41 43 0.04 3.4 9.2 0.9 1 23 1684 1706 1684 1706 0.94
42 43 0.00014 0.012 16.9 1.8 1 23 1712 1734 1712 1734 0.98
43 43 9.9e-05 0.0085 17.4 2.5 1 23 1740 1762 1740 1763 0.95

Sequence Information

Coding Sequence
ATGGAACTTGCGCGTAAGTTGCTAATAAAACGGCGCAATGTCGAGTACATCCTGCAATACAGCAACGTCACTCCTTTCACGTGGCACAAGTCCAAATACAAATGCTTCTACTGCTCAGAAGTTATGAAAGACCCCAGTTTTCTGAGACAACACACCGCTGAAAACCACGCGAATGCTAACCTAGAGCTAATAATTTACGATAGAACTAAAAGCAATAGGAATAAAGACGCAGCGATCAAGATAGACGTTACTGACATATGTTGCAAGCTCTGTCCGCAATCTCTGAACTCACTGGAAGAACTTATCCATCATATAATCATAGCTCATGATGCTGAGTATAACGTTAATATCCCTAACTGTGTGCTACCTTTTAAACTGGATAGGGACGCCCCTACTTGCGCCACCTGTGATTCTAAATTTGCCTTCTTTGAGTATCTGTTGCGACACGCGAATAAATACCACCTCTCCCACCAATTCGTTTGCGATGTCTGCGGCACAAGCTTCCAAGGGGAGATACACCTCAAAATGCATCATAGATACTACCACCGCGAAGGTGGCTACATCTGCGAGACTTGCGGCATCAGTCTTGCGACGATATCTAAGAAAATCTTACACGAAAAGAATGTTCACAACGTTAATCTCTACACGTGCCCGCACTGCCCGGAAACCTTCAAAAGCCCGTATCTAAAGAAGCTTCATCTAGCCAACGATCACGGGGTCGAGGAGCTCAAAATCAAGTGCCCGTATTGCTTCAAAGTGTTCCCGCAAGAAAGCATTATGTCAAGGCATATGAGACGTGTTCATTTACGAGAGAAGAATGTAGAGTGTGGCGTCTGCGGAGACAAATTCTTTGGTCCCTACGACGTGAAACTTCATATGCTAAAACATAATGGGGATAAGAAATTTGTTTGCACAGTTTGCGGAAAGAAATTCGCCAAAAAAAGCAACTTAAACTCTCACATGGTCTTGCATACGAGAGAAAAGAACTTCTTGTGTCAAATTTGTGATAGATCCTTTGCGCATCAAGCTACTTTAAAGATGCATATGCGAAGCCGACATCAGCATAATATTGACTTCAAGaatgaagttgaaggaatagggaatgaagttgaaggaatagggaatgaagttgaaggaatagggaatgaagttgaaggaatagGCCTTGAAGATGAGAGGATAGAGTATGATGATGAACTGAAGAATGATGACGAAGAGGAGGGGATTGATCTTCAGGATCAGAATATTGAAGTGATTGAGGGACTGAATGATGATGAAATCACTGAGCTTATACAGCAGGGGGGTTTGGAGGTACAGGTGCACAGTAGCCACACACAGGGCAGTTATCTGGAACGACTTGGTATACTCAGACGCAACATTTTCACCATCCTCTGCTACTCAAACGTTACGCCTTTCAATTGGAACACGAAAGGCTTCCGTTGCTTCTACTGCTCAAAGCAGTTGCGAGAATCCAATATCAAAGAACACACAGACAAACATAATGCCGTAGACTTGGATAGTTTCCTCAAAAAGCATGTTATTACCAAAGATATACCAGTCAAAATCGATATAACAAATTTAGCTTGTAATTTCTGTCCTGAAACCCCCATCGCGTCTTTAGATGAAATGGTATCGCATATAGTTGAAAGCCACaacgaattttatgatactgAGACGGAACTATGCTTCTTCCCTTTTCTTCTCAAGAAAGATAACAATATAATGAATTGCGTGTTATGTGAGACGGAATTTGACAACTTTCCGTCCCTTATAACGCACATGTACAAGCAGCATGTTACACACTCGTTTATATGCCAAGTATGTGGCCTCAGTTTCAAAGACCAGGTCCGCTTGAACAGGCATTTCACTGTTAGTCACATCGGCCACCGCTGCACGGTCTGCGACAAAATCTTCGATGCACACCACAAATTATATAAACATAAGGAGAAATTCCACGGGCATGTCAAAACTTACGACTGCAATCTCTGCACTGGCAGCTTTAAAAGCAACTATCAACTCAGAGTTCATTTAGGGAAGGTCCACAACGTCCAGAAATATAGAATCAAATGTGAGCAATGCGACAAAATTTGCACTACCAAAGGTGCTATGGTCTTGCATGTCCAAAGCTTGCATTCAGACATCAGATACCAGTGTGATGAGTGCGATTATACGACAGGAATCAAATGGCTGGTTAAGCTACACAAACGGAAGCACACAGCGGTCAAGGATTATGTGTGTAGTGTGTGTGAAAGAGGGTTCGGTCGGTCGAGCAATCTGAGAGCTCATATGAAAGTCCACGTGGGAGAACCTAGAGGTGGCCAGAAAGCAAAGCCATTGATAAAATCGACGCCAGCACCGCCCAAACGACCCGTCAAAAGCCTTGCACCATCCTCAAGCGTACTCGCAACAAAACCCAAGGGTTTATCCAGTAAGGACAAACGGAACATAATGATACAAAACGTACTAGCGATTCTCCAAAAAACAACCGCCATGCCCTTCCGTTGGTTAAAGAGTTCGTACCGTTGCTTCTATTGCTACGACATCTTTCAAGAGGCGTCCGACTTAAAAGCGCATCAAGCAACACACAGTGATGATTCCATCAAGGAAAAGGCAATGAACAACTATTGGGAGCCTGtagtatacatagatatatcaAACATGAAATGTCTTCTTTGCCCTGAAGAAGTAACAGATCTATACGATATGATCAACCATTTAGTCTCTAAACACAGCGTCGTTTATAACAAAGATGTAGGCACTTGTATGGTTGCTTTCAAGCTTAACAATTTCGACGTAAGTTGCCTCGCTTGCGGCATTAGCTTCTACTCCTTCGGTCCATTGTTGAATCACACGAATAAAGACCATAAAGGAGCGTCGGTCATCCTCTGCGACATCTGCGGTCAGAACTATAAAGACCAGAGTCTTTTACGACTCCACGTTAAATCAGCGCATGACAACAGTGGCATGCTATGCCCAGAATGCGGCGACAAATTTGAGACGCGTTCCAAGTTAAAAACACACCAAATAAACAGTCACGGGGTCGAACGTAAATTCAAATGTCTTGTCTGTGATCTCACCTTTGGCAGCCATTACAAAAGATCTCGGCACATGGCGACCGACCACAAAAACCGACAAGAGATCAAATGTCTTCACTGCCCGAAGACCTTTGTCTTCCGCAGCATGATGATGACACATCTAAGAGACACTCATTTGAAAGTGCGCAACCATATCTGCGGAATTTGCGGGTGGAAGGCTTTCAACAGTAATAGATTGAAGAATCACATGTACAAACACAGTGGGGAGAAGAATTTCAAATGTGATTCCTGTGATAAAGCGTTCACGACCCGGAAGATTATGAAGGCGCATTTTGCGAGGATGCATAAGCCCCCAGAGGCAGCTTCTGTGGTTCCGATCATGACGCATTATGGCGTCTCATTGAAGAACGAACAACAACTGGCAGCTTTGTTAATCACCATCATTCAAAACTCCACCATCATACCATTCCGATGGTATCACGGAAAGTTCATGTGTTTTTACTGTCCCACTAAACTATCCAGTTCAGAAGAGCTGAGACAGCATAACCTAGGTGGACACAGCGAAATTAATATCACAGAAATTATAACCAAGTTCGTTTATAATGACAGAAGAATTAAATTAGACACCGGAATCGCGAAATGTAATCAGTGCGACGAAGAAATCTACGATATATCAGACTTTATCGAACATTTATCGAATACCCACGACGTTAGGTACGATCCGGTTATCGCTAGACATTTCATATCCTTCAGACTATCCGACGATGAAATAACCTGCATTGAATGCGATGAGAAATTCAGATATTTCGGTCCTTTACTGGTCCATACGAACAAAATACATTTAGACAAACACGTTTGCGAAATTTGCGGACAGGGAGTCGTCGGTAAAGCAAATATACTGAACCATGTCAGACAAATACATGGAGTTAAGACTTGCAAGCATTGCAAAGAGACCTTTCAAACCCAATACGCGTTACTCCAACATGTTTCTTCTAACCATACGGACACGTTGAAATGTAGCATTTGCGGTGAAATTCAGCAGAATAGTTATAAAATGAAGAGGCATATGGCATTAGTGCACAATTGTAAGGATTCTCAGATAGTTTGCGAATACTGTTCGAAGATTTTCACGAGAAATAACAAGTATGTGCAGCATAAACAGCATGCCGAAGATGCGACTTACGTCAGCGCAGTCATGGAAAAGATGTCAGAACTACAGAGGAAAGAAGATCTTGTAACCCTCATGTCGTCGATTATAGAAAACTCAACAGCAGTGCCTTTCCGATGGCATTGCAGCAAATTCGCCTGTTTCTTCTGCTGCTTTCCATTCGAAGAGAGTTCTAAACTCAAGTCCCATTACTACGAAGAACACAGCGACGCGAAAATACGAAACACTTTCCGATCCGTCATCAAAAACAGCAAGGTTAAACTAGAAATTTCGAACCTAACATGCAAGAAATGCTCGAAACCATTCACTGTCTTAAACGATTTCATGGATCACCTCGTCAAAATTCATTCTTTAAAGCTAAACCTAGAAATGAAGCATCAAATTTTTGCTTACAAACTCTCTGATGAGAGCATGCAATGCTTGCAATGCGGCGATGAGTTTCGATTCTTCGGGACGCTTCTAAAACATACACACGCGAAACATAACACAACTAACGAAGCGTTCTTATGCGAAATTTGCGGGCAGGCGTTCGTAACaaaaacgagcgtagcgagccaCGTTAAATCAGTACATTCACAAGACAACGCTACCTGCGATAAATGTAACATCGCTTTCAAAAACGTTAACGCGCTTCAGTTGCATCATAGACGCACACATCGCACCTACATGCTGAAATGCCCAAAATGTCCAGAAGTTCTAACCAGTCCGTATCTAAGAAAACGGCATCTAGCGAAAGTCCACGACGTAAAACGATTCCAGTACGAATGCGACTTGTGCAATTTCGTCTTCACGCTCAAAAGCAGACTCATTTCCCACAAATCCAGGGTCCATATGAAAGAACGTAGCTACAGTTGTGAATTCTGCGCATACAAGGCCTTCAATAAGGAAAGTTTGACTCGTCATATGGTCTCCCACGACGATTCCCGACCGTTCCCATGTGAGTTTTGCAAGAAAGCCTTTCAGAGGAAGAAAACTCTAGAGTTACATAGAAGAATACACACAAATGATAGGCGATACATCTGCAGGGAGTGTAACAAGGCCTTCGTGCAGTACACGAGTTTGAAACTTCATTATCGAGTGCATCATTCGAAAGAGCCGTCTGGCTTAGAAGGACAGTGGCCGCGGCATTGA
Protein Sequence
MELARKLLIKRRNVEYILQYSNVTPFTWHKSKYKCFYCSEVMKDPSFLRQHTAENHANANLELIIYDRTKSNRNKDAAIKIDVTDICCKLCPQSLNSLEELIHHIIIAHDAEYNVNIPNCVLPFKLDRDAPTCATCDSKFAFFEYLLRHANKYHLSHQFVCDVCGTSFQGEIHLKMHHRYYHREGGYICETCGISLATISKKILHEKNVHNVNLYTCPHCPETFKSPYLKKLHLANDHGVEELKIKCPYCFKVFPQESIMSRHMRRVHLREKNVECGVCGDKFFGPYDVKLHMLKHNGDKKFVCTVCGKKFAKKSNLNSHMVLHTREKNFLCQICDRSFAHQATLKMHMRSRHQHNIDFKNEVEGIGNEVEGIGNEVEGIGNEVEGIGLEDERIEYDDELKNDDEEEGIDLQDQNIEVIEGLNDDEITELIQQGGLEVQVHSSHTQGSYLERLGILRRNIFTILCYSNVTPFNWNTKGFRCFYCSKQLRESNIKEHTDKHNAVDLDSFLKKHVITKDIPVKIDITNLACNFCPETPIASLDEMVSHIVESHNEFYDTETELCFFPFLLKKDNNIMNCVLCETEFDNFPSLITHMYKQHVTHSFICQVCGLSFKDQVRLNRHFTVSHIGHRCTVCDKIFDAHHKLYKHKEKFHGHVKTYDCNLCTGSFKSNYQLRVHLGKVHNVQKYRIKCEQCDKICTTKGAMVLHVQSLHSDIRYQCDECDYTTGIKWLVKLHKRKHTAVKDYVCSVCERGFGRSSNLRAHMKVHVGEPRGGQKAKPLIKSTPAPPKRPVKSLAPSSSVLATKPKGLSSKDKRNIMIQNVLAILQKTTAMPFRWLKSSYRCFYCYDIFQEASDLKAHQATHSDDSIKEKAMNNYWEPVVYIDISNMKCLLCPEEVTDLYDMINHLVSKHSVVYNKDVGTCMVAFKLNNFDVSCLACGISFYSFGPLLNHTNKDHKGASVILCDICGQNYKDQSLLRLHVKSAHDNSGMLCPECGDKFETRSKLKTHQINSHGVERKFKCLVCDLTFGSHYKRSRHMATDHKNRQEIKCLHCPKTFVFRSMMMTHLRDTHLKVRNHICGICGWKAFNSNRLKNHMYKHSGEKNFKCDSCDKAFTTRKIMKAHFARMHKPPEAASVVPIMTHYGVSLKNEQQLAALLITIIQNSTIIPFRWYHGKFMCFYCPTKLSSSEELRQHNLGGHSEINITEIITKFVYNDRRIKLDTGIAKCNQCDEEIYDISDFIEHLSNTHDVRYDPVIARHFISFRLSDDEITCIECDEKFRYFGPLLVHTNKIHLDKHVCEICGQGVVGKANILNHVRQIHGVKTCKHCKETFQTQYALLQHVSSNHTDTLKCSICGEIQQNSYKMKRHMALVHNCKDSQIVCEYCSKIFTRNNKYVQHKQHAEDATYVSAVMEKMSELQRKEDLVTLMSSIIENSTAVPFRWHCSKFACFFCCFPFEESSKLKSHYYEEHSDAKIRNTFRSVIKNSKVKLEISNLTCKKCSKPFTVLNDFMDHLVKIHSLKLNLEMKHQIFAYKLSDESMQCLQCGDEFRFFGTLLKHTHAKHNTTNEAFLCEICGQAFVTKTSVASHVKSVHSQDNATCDKCNIAFKNVNALQLHHRRTHRTYMLKCPKCPEVLTSPYLRKRHLAKVHDVKRFQYECDLCNFVFTLKSRLISHKSRVHMKERSYSCEFCAYKAFNKESLTRHMVSHDDSRPFPCEFCKKAFQRKKTLELHRRIHTNDRRYICRECNKAFVQYTSLKLHYRVHHSKEPSGLEGQWPRH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-