Esub030632.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Eupithecia subumbrata
Gene Symbol
clz9
Assembly
GCA_949316285.1
Location
OX438651.1:5426842-5429994[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 6.9e-08 7.5e-05 23.3 0.1 2 41 17 57 16 61 0.92

Sequence Information

Coding Sequence
ATGGTGCGAATATATATAAGAAAAACGGATAGAGGGACTACTTACTCAAAAGAAAAATTGCTGGAGGCTGTTAAAAAAGTGAAAAATGGCACCATATCTGCATACGCCGCTTCAAAATTGTACAAAATACCTAGGGCGACGATAGTAAATCGTGTTTATGAACGAAGAGGTTTGAAATCCAACACTTTAGGAAGAGACACAATTTTATCTCGAGATGTTGAAGAAATGTTGGTGAGCAACCTACATGTGATGGAAAAATACGGATTCGGTTTAACTCGAAAGGAATTGTTAGAAACAGTGAGCCAATATGTGACACAAAACAATATCACAAATCCATTTAAGAATAGAGTACCTGGGGAGGACTGGTTTCTCTCCTTTAAAAAAAGACATGGCCTTTCCGTCAAAAAACCCCAACCAGTCGAATATGCACGTAAAAGAGCGTGCAGCCCTGCGATAATCTATCCCTACTTTGATCTGCTGGAAAAAACTATTGATGATTTGGGCTTACGTGATAAACCGGCACATATCTGGAATGTTGACGAAACCAGCTTCAGTAAAGATCTAAGCAAATCAAAAGTGGTGGGCCTTCGAGGCTACACGTCAACCAGAACCATCTCGTCTCCAGGTAAGGATAATACGACTGTGCTGCTAGGATGCAATGCTATTGGTGAAAAAGCTCCGCCACTATTAATATATAAAGGGAAAAACGTGTGGGATCAATGGACATCGGAAGACGATTACCCTGGAACTGTATATGCTGCTACCGCAAATGGCTGGATGGAAGCGCCagtttttgaaaacttttttgaaaaggtTTTTTTGCCAACCGTCGGACTGAAACGGCCCATACTTTTAATTTATGATGGCCACTCCACGCACGTGggaataaaaattatagaaaagGCACGAGAACATAACATAACGATTCTCAAAATCCCACCACACACTAGTCACGTGCTACAGCCACTTGACTTGGCCGTAAACAAATCATTTAAAGATAAATGGGACATTACTTTGGTGAAATGGCAGAGATTGAATATTGGCAAGGTTTTGCCAAAAAAAGAATTTTCGTCCCTTATTGGTCAAGTGTGGAGTCAAGTGGATCCACAAGTATGTGCAGCTGGCTTCCGCAAAGCAGGAATATATCCCCTGAATAAAAATGTCATTCCTGAAGATAAGTTTGACCAAGTTCTGTTAAGCGACTGGAAACACCAACACCAAACAAATGTAAACCAGCTCCAACCTGATGAATTGGAAGTCAGCGAGGCTATTCCCGTTCAGTCTGTAGCTCACCAGCTAGAGCCTAATCGTTCTGATGCATGCAGTTCTACGCATGTTCAATCAGTTGTTATGACCGATGGACCCATTGCAGATCAACTTGAGATTATTCAGCCCAAAACTCTTCGCACCCTAGTACTGGATAtcgttaataaaatattagacaCTAACTATGTACAACAGAAATTTGAAGCTATACGACAAGGCAAGGTTGACTTTGGCATAGTCACCCATCACAGTCACACCAAGTTGAAACTATTATGTGATCAGAAACTAGTTCCACAAAAGATACATTCTATGGAATGCCAGGCCTTAGAAGGTAAATCAACTGGGAGGTGCTTTGATTTAACATCAACATGCAATGAGATCCATGTTTCTCTAAAAGAAGATGCATTAATTCCTGTGTCACGGTTCTCCAAGATATCGCTGAAACACCTACGAGTAGTTAGTAGTGCTCCACCGAAGTCAATGAATGAACATTTTCAATCTGAATCTCAGTCAAGGAATTTAATTATTGATAACCAGCTAGTAAAAAGTAATATTACTTTTGAAGAACTACTTCTTAAATCTGTCAAAGCTGGAACCAGCGCTAAGACAAAAAGGAGAAAAATTGCTAGGGGCGCTGAAGTTATCACCCATGACGAAGTATACAATAGATGCAAACTAGAAGAAGATGAAAAGaagcagaaatcaaaaaaacaacaaaaaaggaaaaaagatcCTAAAGAAGATAAAAGcgtgaaaaagaagaaaaacatGAGAACATTGAAAAAAAGACCATCTGAATCTTCAAGTGAAAGTGAAATTGATATGGTTCTTGACGATGAAAGTGATAATAATATAGAGTATGACCAGTATTGCAAAAATTTGATAAATGAAGCTAACGATTCGGATGGTATAATAGATAATGAGAAAATAGAAGAAAGATGCCACAAGCAAAGCAAGGTTGCTTTTACTAACtatgataaaaataacaatacaaaacataataacaataGATACAGACCAGGAGAAGATAAAAAGATACAGAAGTCAAAAACACAactaaaaaggaaaaaagatcCTAAAGAAGATAAAAGCgtagaaaaaaagaaaagcatgagaacatttaaaaaaatacaatctgAATCTTCAAGTGAAAGTGAAATTAATATGGTTCTTGACGATGAAACTGATAATAATATGgagtttaaacattacaaaaattcGATAAATGAAGCTAAGAATTCAGATGATATAATAGAAAATGAGAAAATTCAAGAAAGATGCCACAAGCAAAGCAAGGTAGCCTTTACTACTtatcagaaattgtacaatagATTCAGTCTAGAAGAAGATAAAAAGGTACAGACGTCAAAAAGACAACaagaaaggaaaaaagaacCGAGAGAAGAAAAAAGCGTAGgaacgaaaaaaatatatgaaaagaAAATGAGGCCTTCTGAATCTTTGAGTGAAAGCGAAAGTGAAATGTATTTTGACGATGAAAGTGAGTATAAAAAGTGTTCCAAAAATTTGAAACATGAAGACTCGGATGATATTATGTCAGAAGACGAAAATATGGAAGAAAGATGCAGCAAAGTCACCTTTACTTTAAATGATTGGCTACTAGTAAAGTTTGCGACAAAAAAAACCGTAAAGCACTTTGTGGGTATTGTGACACATACAGTGGATAACTATTTCCCTGTTGTCAAATATGCAAGAAGAGTAGTTTCGAAAGTGGAAGATCAAACAGTTTTTACGTTTCCGAACATAGACGATATATCAGTAATCCGGCACGTGGAAGACGTTGTTACAAAACTTCCTCAACCTGTCATTGGTCGTAGAGGACGAATCCTTTTCAAAATGTCGTTTAAAGGCTACAATATTCAGTAG
Protein Sequence
MVRIYIRKTDRGTTYSKEKLLEAVKKVKNGTISAYAASKLYKIPRATIVNRVYERRGLKSNTLGRDTILSRDVEEMLVSNLHVMEKYGFGLTRKELLETVSQYVTQNNITNPFKNRVPGEDWFLSFKKRHGLSVKKPQPVEYARKRACSPAIIYPYFDLLEKTIDDLGLRDKPAHIWNVDETSFSKDLSKSKVVGLRGYTSTRTISSPGKDNTTVLLGCNAIGEKAPPLLIYKGKNVWDQWTSEDDYPGTVYAATANGWMEAPVFENFFEKVFLPTVGLKRPILLIYDGHSTHVGIKIIEKAREHNITILKIPPHTSHVLQPLDLAVNKSFKDKWDITLVKWQRLNIGKVLPKKEFSSLIGQVWSQVDPQVCAAGFRKAGIYPLNKNVIPEDKFDQVLLSDWKHQHQTNVNQLQPDELEVSEAIPVQSVAHQLEPNRSDACSSTHVQSVVMTDGPIADQLEIIQPKTLRTLVLDIVNKILDTNYVQQKFEAIRQGKVDFGIVTHHSHTKLKLLCDQKLVPQKIHSMECQALEGKSTGRCFDLTSTCNEIHVSLKEDALIPVSRFSKISLKHLRVVSSAPPKSMNEHFQSESQSRNLIIDNQLVKSNITFEELLLKSVKAGTSAKTKRRKIARGAEVITHDEVYNRCKLEEDEKKQKSKKQQKRKKDPKEDKSVKKKKNMRTLKKRPSESSSESEIDMVLDDESDNNIEYDQYCKNLINEANDSDGIIDNEKIEERCHKQSKVAFTNYDKNNNTKHNNNRYRPGEDKKIQKSKTQLKRKKDPKEDKSVEKKKSMRTFKKIQSESSSESEINMVLDDETDNNMEFKHYKNSINEAKNSDDIIENEKIQERCHKQSKVAFTTYQKLYNRFSLEEDKKVQTSKRQQERKKEPREEKSVGTKKIYEKKMRPSESLSESESEMYFDDESEYKKCSKNLKHEDSDDIMSEDENMEERCSKVTFTLNDWLLVKFATKKTVKHFVGIVTHTVDNYFPVVKYARRVVSKVEDQTVFTFPNIDDISVIRHVEDVVTKLPQPVIGRRGRILFKMSFKGYNIQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-