Esub030792.1
Basic Information
- Insect
- Eupithecia subumbrata
- Gene Symbol
- -
- Assembly
- GCA_949316285.1
- Location
- OX438651.1:6252254-6252652[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.3e-08 5.7e-05 23.7 0.1 5 40 1 36 1 41 0.91 2 2 3.9 4.2e+03 -1.5 0.1 20 25 37 42 36 48 0.63
Sequence Information
- Coding Sequence
- ATGAAAAAGGCTATTGATACGGGTCTTAGCAAATCCATGGGCTACAAAAAAGCTGCAGTACAGTATGAGATACCACTGACCACAGTGGAGCGTCACaAGAAGAAGACACAGAAGGCTGCTTCCAAAGCACAGAAGAAGCACGAAGATACTCTATGTGTGTGCTGTGTTGATGTTAATAACACATATTTGAAATCAACAGAGGATTGGGTTGGTTGCCAGCTGTGCGGACGCTGGTCTCATACGGCCTGTGCTGGCgttaataattctgacgctgaAGAGATTCACGTTTGCATCCATTGCGAGAATAATTAG
- Protein Sequence
- MKKAIDTGLSKSMGYKKAAVQYEIPLTTVERHKKKTQKAASKAQKKHEDTLCVCCVDVNNTYLKSTEDWVGCQLCGRWSHTACAGVNNSDAEEIHVCIHCENN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00703872;
- 90% Identity
- iTF_00703872;
- 80% Identity
- -