Basic Information

Gene Symbol
-
Assembly
GCA_949316285.1
Location
OX438637.1:6086708-6097196[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.3e-09 1.2e-05 26.5 0.1 31 89 5 52 3 52 0.89

Sequence Information

Coding Sequence
atgacatggcgagTTACCCTGAACGCAGTTTACAACATAGTGGTGTCTCGCGGCGGCTACGACGCGGTCTGTCGACACAAGCTGTGGCGAGTTCTGTTCAGCGATCAGCCGGTGCACACTAGACGGCATTACGAGAGATACCTCCTAGCTTTCGAGCACCACGAGCGTCGACACGGCATGAAGAACGGACAGACACAACCAATAGACACCTACACTATACCTCACTCTCCGCTCAGAGACCGGCCGCTGGCTCTGAATGTGGACAGCGAGACAGGTGAAATCAAAGAAGACCCCATTATCTCTAAAGCCGCTTCCGAGTTAAACCAGGAGTTCCTAGCGTCTCTGCCTCGAGAGGAGAAACCCAAACTAGCTGTCAAACCGACGGACGCGCTCATGCCGAGAGACTGGACGAATAATGATAAAGGTCCCGATGAAAAACAAGGTGATCTGTACCTACTCCCCCTCCCCGCGCCGTGCCCCACTAATGTCAACGGACATGCGCACAACGGGTCTCCACTCGATCAGaaGGTGAATCGCCCGGCTGGCCGGAGCTCGCTCCGCGCCGTGAGAGTCAAACCCGCGCGCACCAACGCGCAGCCCGCCACCGCGCCTAACACACCCCCAACGACCTACCCCCCTCTCCCCGAGACCGCCCGCTCGCCCCCCACAGCGCCCCCCGTCACTAACTTCGGCATCCACCATCCACCACCGCCGAGCAACAACAGCGACGATGAAATTGTAGAAGTGCCATACAAGCCTAAAACACCAGAAATTATCGACCTAGACGAATACCCCGAAACGGAATCACCTGAAACCAGCTCAAAGAAGAAACGCTTAGACATTCTCAAAGAAAGGGGTCTCGAGGTCACCCCCTTACCCGCCCCCTGGCCAAACCCCATAACCCCTGTGATCACCCCCAACCCCCTCCTAATGAACCCCGCTGTACAACAGCAAATAATGGCGTCTCAATTCTACGGGTATTATACACCCTCAGTGGTCGTCGCCCCTTATCCCAATGGGGTTCAACCTCCTAAGGTTATACAAGCTACTTCTATATTCGGGTCTACCAGTCCAGAGAAAACAGTGTACGGCAACCCTAAAGACCCTTTCATGCCACCACCGCACGTGTTACATGGGGTGCCAATCAAACCCCAAAGGGTCCAAGTGACACCCACGCCAAATAACCCCCAAGATATTTTGGACTTAACCTGTAAGATGGCGAAGCCTGCCGTAGAAATTGTAAGGGTTCCTACAGCACCGTCGCCGTCAAAAACGCAAAATATACCGAAGAATTATTCGATTATAGACGGAAAAGCGGTGGTAGGATCTAACTTAGAGATAACTCTAGTAAATAAATCGCAAACACCGCCCAAAAAGGACCCCATCAGGCCCCAAAAACGATCGTCTAACGGTAAATTCGTAGCAAAAACTCCTACACCGCCAAAGGATAAAATTATCCCCAAAAAACCAGCTATAGTGGTACCTAGCTATCAAATCCGGGATGATCCCTCCCCCACCAGCTCCAATCACTCAACCAGCTCTAGAGAAAGTCAAAGCCAGAAAGAACCTCAAAAACCAACGTCCTCGTTCCTAGATCCATATATGGCACTATACAGCTTAGCGGGTCAGATGGACCCGAGGCAACTCATGGGGGGTCAGTTAGACCCGAGGCAGATTGCCGCGTATAGAGAAGCGATGGTTAACCAGTTTAGGGGTTATTCGCATTTGTTAAATATGGGGGTTGGTAATCCTACTACTAAGAATTGA
Protein Sequence
MTWRVTLNAVYNIVVSRGGYDAVCRHKLWRVLFSDQPVHTRRHYERYLLAFEHHERRHGMKNGQTQPIDTYTIPHSPLRDRPLALNVDSETGEIKEDPIISKAASELNQEFLASLPREEKPKLAVKPTDALMPRDWTNNDKGPDEKQGDLYLLPLPAPCPTNVNGHAHNGSPLDQKVNRPAGRSSLRAVRVKPARTNAQPATAPNTPPTTYPPLPETARSPPTAPPVTNFGIHHPPPPSNNSDDEIVEVPYKPKTPEIIDLDEYPETESPETSSKKKRLDILKERGLEVTPLPAPWPNPITPVITPNPLLMNPAVQQQIMASQFYGYYTPSVVVAPYPNGVQPPKVIQATSIFGSTSPEKTVYGNPKDPFMPPPHVLHGVPIKPQRVQVTPTPNNPQDILDLTCKMAKPAVEIVRVPTAPSPSKTQNIPKNYSIIDGKAVVGSNLEITLVNKSQTPPKKDPIRPQKRSSNGKFVAKTPTPPKDKIIPKKPAIVVPSYQIRDDPSPTSSNHSTSSRESQSQKEPQKPTSSFLDPYMALYSLAGQMDPRQLMGGQLDPRQIAAYREAMVNQFRGYSHLLNMGVGNPTTKN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-