Basic Information

Insect: Eupithecia subfuscata
Gene Symbol: -
Assembly: GCA_963564075.1
Location: OY751122.1:3154728-3158670[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.0079 0.64 11.4 3.5 2 21 79 98 78 100 0.94

2 12 0.00035 0.028 15.7 3.0 1 23 106 129 106 129 0.96

3 12 0.035 2.8 9.4 7.4 1 23 144 166 144 166 0.98

4 12 0.012 0.93 10.9 5.2 1 23 172 194 172 194 0.99

5 12 0.29 24 6.5 3.0 1 23 202 225 202 225 0.96

6 12 0.03 2.4 9.6 1.2 2 21 234 253 233 254 0.93

7 12 0.19 15 7.1 1.8 3 23 263 283 262 283 0.97

8 12 7 5.6e+02 2.1 4.1 1 23 408 430 408 431 0.93

9 12 2.5 2e+02 3.5 1.2 1 20 438 457 438 459 0.90

10 12 0.37 30 6.1 5.4 1 23 491 514 491 514 0.93

11 12 0.0013 0.11 13.8 1.0 2 23 520 541 519 541 0.97

12 12 0.0022 0.18 13.1 5.1 1 23 547 570 547 570 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.0079	0.64	11.4	3.5	2	21	79	98	78	100	0.94
2	12	0.00035	0.028	15.7	3.0	1	23	106	129	106	129	0.96
3	12	0.035	2.8	9.4	7.4	1	23	144	166	144	166	0.98
4	12	0.012	0.93	10.9	5.2	1	23	172	194	172	194	0.99
5	12	0.29	24	6.5	3.0	1	23	202	225	202	225	0.96
6	12	0.03	2.4	9.6	1.2	2	21	234	253	233	254	0.93
7	12	0.19	15	7.1	1.8	3	23	263	283	262	283	0.97
8	12	7	5.6e+02	2.1	4.1	1	23	408	430	408	431	0.93
9	12	2.5	2e+02	3.5	1.2	1	20	438	457	438	459	0.90
10	12	0.37	30	6.1	5.4	1	23	491	514	491	514	0.93
11	12	0.0013	0.11	13.8	1.0	2	23	520	541	519	541	0.97
12	12	0.0022	0.18	13.1	5.1	1	23	547	570	547	570	0.97

Sequence Information

Coding Sequence: ATGTCTGAAGATCAGCCCGAAGTGCCTCCAGACAGTCAACCTATCGCAGGCCCGGCCAATACTGGGGATATGGACAATATGAACATATTTGCCAGTGTATGGGTTAAAGTGGAAGTGGTAGAGGAGGATGATGAAGATATGACTCCAAGTGAACCAAAAATCGAGGAAACTGCAAAACCGCTAAAGAAaaaaaaaaagacATACAAAAAAGGGCCACCTAAACTTAAGAACTTGAAATGCAATGAATGCGATCACCGCAGCTCCAGTAAACAAGCCCTAAAGGCACACATGCTCTGCCACTCGACAATTAAGCCCTATACATGCACTCACTGCGACTACTCAACAAAATACCCACTATCCCTTAAACGGCATATATTCGTACAACACGAATGCAAAGAATCAGAAACAGCCAGGAATAATCTGCCAACCTATCACTGCTCAATATGCAAGTACACCACGCATTTTAAATGGAACCTTAGCTCTCACCAAAGAAAGCATGAAATAGCTAAGCAATATCAATGCGCTTACTGCAGTTATAGCACTGGATACAAGCATAACTTCGAGAAACATAATCGGAAGCACATGTCTGAATCGGAGTCAAATTACTGTTGTGATAAATGCCCGTTCACAACCAAGTTTGAGGGGCATATTGTCCGTCATCTAGCcaaaatacattttgaaatatcAGGGAAAGCCAGTCGGTGTGATTATTGTTCTTTCTCAACCAGAACTAAGTGGAGGTTGAATAAACACGTAAACAGGAGCCGAGAAGAGAAACCTGTGTTCTGTCCTATTTGCACCTATGAAACCAACTATCGATGCGCTTTGAGAGAACATAAGCTCTCTCACACTGACACCAGTCAGATGAACCAACGCTGGCTTGATAATCTATTCACAACAGAACCAAACACAGATTTACAAAACGTCAAAGAAAAACGACCTAACGAACAACCACTAGAAGCAATAGAAACCTGTGAAATGCAGTCTAAAGAAGAGACAGGACCCGGAACTATATCAGAAACCACAAAAGAAATCGAAGATCTCAAAGACAAATTGTTAAACGATTCATACTATGTGTACAACGATAACCCTCAAGACGTTGAAGTAAACTATGCTCAAGAAACTGATCATGAACGAAATAACCACTACCGATTGGATCCAGCTTGTGAAGTCGAATGGGGCAGTATTCGAGTTATGGAATCTCCAGACCAAGACCGACCGTTCCAATGTATAACATGCTCGTACAAAGCTAAGTTCAAAGCATCTGTTCAAAGACACTACCAACGGCACCACACCAGCCACAATCGACCATACAAATGCATAAAGTGTGACTTCAGCACTAAAACTAAAGACCAAATTTCTCTGCACAACAAACGGAGCAAATCTGAGTTCCTCTTAAGCTGCAAATTATGTTCCTTCTCGACTCTATTTAAGTGTCAGTATGCAATGCACGAAAAAGCACACATGGCTTTTAAATGCGTGTACTGTGATTATGCTTGTAGGAAAAAACATGAAATATACAAGCATTTTACCGTAGTACACATAGAAAACGGGCTAAAATGTAGTCACTGTGACTACAAAGCTGCAAGAAAAGAAAGTCTTTTGGTCCATCAATCAATACACACAGGCAAAAAGCCCTTCCAATGCAAACATTGTTCGTACACTTCTGTCAGAAGACATTTACTCGAGAACCATATTATACGGTTTCATTCGAACCAGAAAGAAGAGACAGTTTTAGAAGAAGATAAGATTGAGTTACTGAGAAAGCCTTTAGTAGAAAACTTGGAATCAAATTTGAATCATTCTAGCGATTTTACTTAA
Protein Sequence: MSEDQPEVPPDSQPIAGPANTGDMDNMNIFASVWVKVEVVEEDDEDMTPSEPKIEETAKPLKKKKKTYKKGPPKLKNLKCNECDHRSSSKQALKAHMLCHSTIKPYTCTHCDYSTKYPLSLKRHIFVQHECKESETARNNLPTYHCSICKYTTHFKWNLSSHQRKHEIAKQYQCAYCSYSTGYKHNFEKHNRKHMSESESNYCCDKCPFTTKFEGHIVRHLAKIHFEISGKASRCDYCSFSTRTKWRLNKHVNRSREEKPVFCPICTYETNYRCALREHKLSHTDTSQMNQRWLDNLFTTEPNTDLQNVKEKRPNEQPLEAIETCEMQSKEETGPGTISETTKEIEDLKDKLLNDSYYVYNDNPQDVEVNYAQETDHERNNHYRLDPACEVEWGSIRVMESPDQDRPFQCITCSYKAKFKASVQRHYQRHHTSHNRPYKCIKCDFSTKTKDQISLHNKRSKSEFLLSCKLCSFSTLFKCQYAMHEKAHMAFKCVYCDYACRKKHEIYKHFTVVHIENGLKCSHCDYKAARKESLLVHQSIHTGKKPFQCKHCSYTSVRRHLLENHIIRFHSNQKEETVLEEDKIELLRKPLVENLESNLNHSSDFT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00701618;
90% Identity: iTF_00704546;
80% Identity: -