Basic Information

Insect: Eupithecia subfuscata
Gene Symbol: -
Assembly: GCA_963564075.1
Location: OY751123.1:904984-909017[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 8.6e-05 0.007 17.6 4.2 1 23 261 283 261 283 0.97

2 10 0.48 39 5.8 3.8 1 23 530 552 530 552 0.97

3 10 0.033 2.7 9.5 0.7 2 23 558 580 557 580 0.93

4 10 0.0025 0.2 13.0 3.3 3 23 590 610 589 610 0.94

5 10 0.00074 0.06 14.6 0.4 2 23 614 635 613 635 0.97

6 10 0.028 2.3 9.7 1.6 2 23 649 671 648 671 0.95

7 10 0.00084 0.068 14.5 2.4 1 23 677 699 677 699 0.98

8 10 0.00044 0.035 15.4 2.4 2 23 706 727 706 727 0.98

9 10 0.039 3.1 9.2 2.9 1 23 733 756 733 756 0.94

10 10 0.00031 0.025 15.8 1.1 3 23 762 783 760 783 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	8.6e-05	0.007	17.6	4.2	1	23	261	283	261	283	0.97
2	10	0.48	39	5.8	3.8	1	23	530	552	530	552	0.97
3	10	0.033	2.7	9.5	0.7	2	23	558	580	557	580	0.93
4	10	0.0025	0.2	13.0	3.3	3	23	590	610	589	610	0.94
5	10	0.00074	0.06	14.6	0.4	2	23	614	635	613	635	0.97
6	10	0.028	2.3	9.7	1.6	2	23	649	671	648	671	0.95
7	10	0.00084	0.068	14.5	2.4	1	23	677	699	677	699	0.98
8	10	0.00044	0.035	15.4	2.4	2	23	706	727	706	727	0.98
9	10	0.039	3.1	9.2	2.9	1	23	733	756	733	756	0.94
10	10	0.00031	0.025	15.8	1.1	3	23	762	783	760	783	0.96

Sequence Information

Coding Sequence: ATGGAGGCTCTTGATATTCCTGAATTCAACATCGAAAATAACACGACATCAGATACAAAAACTTTACCAACGGGCAGTAAAGCTGATTCTGTTCCGATTCTACTAAACTCCGCTCTGAATTCTGCGGAAATAGGCGCTTTACTCGAAGATGACTTGATCTTATCAGAAGTTATTACCGAACCAAAAAATGAAGAACTTACTACCAAGAATGCGGTCAGTTTCCTTATATCAGGAACGCTGTCGAGTAGCGTATGTAGATACTGCCTCGAAGTTACGGAGGAGCTGAATAGTTTGGAAAAGATAGTCGAAATTGGGGCAAAAGAAGGTGTTTATTCTGTTTCTGTGAAAGACATGGTAGCAAGTTTTCATCCATTTCAAGTTCAAGAAGATCCAAATTTCCCTGACCGGATATGCCATAAATGTGTAGATCGCACCATAAACTCCTACCTATTCACGCAGCAGTGTGAACAATCAGAAAGGGCTCTAAGAAACTGCTTCGAAGATATCTACACAAAATTCACCAAATTGGATCCTCTCGAAGGAAAGAAACAGAGTAGAGGGAGAAAGAAGATCTATGTAAACCATGATAAGATTAACGCTGAACATTTAAAAGTAATAGACTACGCTGATCCAATATACCACATAGTCAATACAAATGCTGATTGTCTAACATCACAACCAGAATCAATATCACAACTAGAATGCCTTAAATGCTGTCAAGCCCTACCCAACATCGAATCAATGGCGAACCATTCAAAAATACACCCTAAATCAATGTGGTATAGCTGCAGACTCTGTGGCAAGTCATTTCCTAAGCTATACCACTTAAAAAAACACTTCAAGGGGCACCAAAAAGTTCCTGATCCGATAGAAGAAAAGTTTGAATGTAAAACTTGCAGTGCGAGAAACGAGAAATACTACAAACATATACAGCATTTAGAAAAGCATAGATTCAAGATGGTTTTGGACCATTTAGTTCATAAAAGGATGGATAAGCTGTGTTCAATATGTTTGGATAAAGGAGACTTGGTGTCGTTGGATAAAATGGTGACCATACATGGTGGTCCACCAGATTTGATGGGAACAAGGAGCATGCAGAGTATTTTGGCTTCTACGGTGCCTGAGTTGGAATTAGAAGACAATTACATGGGATCAAAAATCTGCGAAAATTGTGTGAACAATGCCATCACATCATATAACTTTAAGATACACACAAACTTTGTAAGAGACCGCTTAAACACTTGCATAAGACATATGCTAGATAGCTTAAAAGATATATCAGTCGATAGTAATCTATGTATAGAAATATCTAAAGATATAATAATGCCCATAAAGGATGATGTAGATGAAACTATATTTGAAAAAGATGAAGATGAAATGAAACAGGAAGTTTTGGAAGATGAATACAGAATTAAATCAGATGAAGATTCAGATGAAATTGAAGCAAAACCTTTGAAAAAACAagatataaaaaataacaaaaagaaaactaaagTAAAAGGAGTGTATATAAATGGTTACAATAATGATGTTTGCAGGGAATTTCTAGCATTTAATGATAAGCCAAAACGCAAAATTATTAAGAAATTCACATGCCCTTTATGTAGCAAACATTATCTATCGGATTATTTCTTAAAAAGACATGTTACAAGGCATATTAATCAAAAACTGCACTGTGAATCTTGTGGAAccatttttgggaataaattCTCGCTGTTAGAACATGAGAAATATGCTCATGTGTTATACCGCAGTGATTATAAAGCTTGCAGAACATGTGGCAGGTGTTTCACTAAAGAATCTAAGCTAAGACAACATGAAGAACAACACAAAAACAAACCCTGCGATCTCTGCAATAAGGTCTTCCAAACACAAGGATTCTATGACGCGCACATGCAACGACATACACCAAAGTTAGCTGAAATAATGAAACAATATGAACAATCCTGCAGCTTCTGCGAAAAGGTCTGCTCAAACGATAACCAACTATCTATACATGTGAATAAAGTTCATCTTCAAATAAAACCCTACAACTGTGATATGTGCGAAAAACAGTATTATACGGAGTACAATTTAAGgtatcacaaaaaaattcacagtagaaGGAGCAAAGAAAAGTGCACTTTTTGCAGCAAAACTTTAAGTTCAAGAAAGCAATTGGTTATTCACATAAGGAAGCATATCGGAGCGACACCTCACAATTGCCAAATCTGTAGTGAATCTTATTACTCAGTAACAAGGTTGAAAAAGCACATGAGCCAAACCCATGGAGGTACAGTCATTTGCAAAATATGCAAACATGTATCTATAAGCAAAAGTGAGCTTAAAATTCACATGAATAAGCTGCATAGTTTTATATAG
Protein Sequence: MEALDIPEFNIENNTTSDTKTLPTGSKADSVPILLNSALNSAEIGALLEDDLILSEVITEPKNEELTTKNAVSFLISGTLSSSVCRYCLEVTEELNSLEKIVEIGAKEGVYSVSVKDMVASFHPFQVQEDPNFPDRICHKCVDRTINSYLFTQQCEQSERALRNCFEDIYTKFTKLDPLEGKKQSRGRKKIYVNHDKINAEHLKVIDYADPIYHIVNTNADCLTSQPESISQLECLKCCQALPNIESMANHSKIHPKSMWYSCRLCGKSFPKLYHLKKHFKGHQKVPDPIEEKFECKTCSARNEKYYKHIQHLEKHRFKMVLDHLVHKRMDKLCSICLDKGDLVSLDKMVTIHGGPPDLMGTRSMQSILASTVPELELEDNYMGSKICENCVNNAITSYNFKIHTNFVRDRLNTCIRHMLDSLKDISVDSNLCIEISKDIIMPIKDDVDETIFEKDEDEMKQEVLEDEYRIKSDEDSDEIEAKPLKKQDIKNNKKKTKVKGVYINGYNNDVCREFLAFNDKPKRKIIKKFTCPLCSKHYLSDYFLKRHVTRHINQKLHCESCGTIFGNKFSLLEHEKYAHVLYRSDYKACRTCGRCFTKESKLRQHEEQHKNKPCDLCNKVFQTQGFYDAHMQRHTPKLAEIMKQYEQSCSFCEKVCSNDNQLSIHVNKVHLQIKPYNCDMCEKQYYTEYNLRYHKKIHSRRSKEKCTFCSKTLSSRKQLVIHIRKHIGATPHNCQICSESYYSVTRLKKHMSQTHGGTVICKICKHVSISKSELKIHMNKLHSFI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00699666;
90% Identity: iTF_00704453;
80% Identity: -