Esub029313.1
Basic Information
- Insect
- Eupithecia subfuscata
- Gene Symbol
- ZFAT
- Assembly
- GCA_963564075.1
- Location
- OY751126.1:5272819-5278409[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.038 3.1 9.3 0.1 2 23 317 338 316 338 0.94 2 12 0.004 0.32 12.3 0.2 3 23 344 365 342 365 0.96 3 12 1.4 1.1e+02 4.3 0.0 5 21 373 389 371 390 0.90 4 12 0.00012 0.0099 17.1 0.2 2 23 398 420 398 420 0.91 5 12 0.048 3.8 9.0 2.5 1 23 427 450 427 450 0.93 6 12 2 1.6e+02 3.9 2.6 1 13 454 466 454 468 0.82 7 12 0.23 19 6.8 0.9 2 23 781 802 780 802 0.93 8 12 0.00041 0.034 15.4 0.2 3 23 808 829 806 829 0.96 9 12 9.9 8e+02 1.7 0.1 5 21 837 853 835 854 0.90 10 12 0.0086 0.69 11.3 0.5 2 23 862 884 862 884 0.91 11 12 1 81 4.8 1.5 1 21 891 911 891 914 0.82 12 12 1.6e-05 0.0013 19.9 2.7 1 23 918 940 918 940 0.99
Sequence Information
- Coding Sequence
- ATGTTTTGCCTAGACGAGGATGGCACCGAGTGGGTAATCACTGATACAGTAAAGGATACAGACACAGTCCAGAATAGCTCCGATTCCAATAACACACGACTTAAGACAcaccaacaaaacaaacaaagataTCGATTCGTCTCAGATCCTGCGCCAAACGTTTCAAGGGCCGACAAGCCCGATTCTAAATTGACACAAACTATGAGtcacaaacaaaataacatgGAAGGATATCGCTTCGTCTCAGAACTCGCGCCAAAGGTTTCAAGACTTGACGAGCCCGCTTCTAAATTGACCCGAACTTTGAAACAAGAAATCATAAAAGGATATCGGTTCGTCTCAGACCCTGTGGCAAGCGTCTCAAGACTTGACAAGCCCGCTTCTAAATTGACCCGAACATGGAGACAAGAAATCATAAAAGGATATCGGTTCGTCTCAGACCCTGCGGCAAGCATTCCACGATTTGACAAGTCCGCTTCAGGAGTTGACCAGCTGAAATGGAACCGCGTTGGTATCGAAGGAGCTGGTGAAGTGTTGCTCAAGACGCCCAAAAGACCTAAACCGTTGCTGGATATTTCGAGCCTTAGCATAGCAGATCAAAATGCTGTGCTCTTACTTCGTAACACTACAGCAGTCCCTTATAGAATAGAAAACGTTAGATCGATCATTCCATGCTTTGCTTGCGGGTGCAAATTTCTTGATCCTTTACTATTCAGAGACCATTTCATTGCCGAGCATCAATCGGTGGACAAGGCCAATGGCCTATATGGTAAACACAGGATCCAGACGCGAGTCGATATAACGGACCTTAGCTGCCTCTTATGTACGCAACCGCTTGATAATTTAGACGAAGCTGCAGCACATCTTGTCCAGATGCATAAAATCGGGATCGATCTGAACGAGAAGCTCGGTCTGGTGCCGCTCAAGTTCCCAGAAAAGGGACTGTGGCAATGCGCTGTCTGCGGGATTAAGTTTAGTGCATTCAGAGAACTGTACAGGCACTCTGGCACACATTTCGCGAACCAGATTTGCGAGGTGTGTGGCATGCAATTTGAGGCACAGTATACATTAAATTTGCATGTAAAAACAAAGCATGTTAAGGGACGGTTATGTATTAAGTGCAAAGCTATATTCCCTTCCAGCGAGGCGCTAAGGCAACACGTAAAGGAAGAACGGTCTTGCAGTAATGGCTATTGCAAAATTTGCGATAAAGCCTTCGGGTATTGGCAATCACTGCAGAAGCACAGAGAAGCTGTGCACGGTGTTGAAAAAAGGATTTATTCATGCTCTGTGTGTCAAAAAGTATTTGAAAAACGCATGCAGATGTATTTGCATTTCAAACAGAAGCATACAGATTCTTACAAGTGTAAAATATGCAACAAAAAGGTTTGTGGGTCTTCAGATGAAGAATGGACGACCACAGAGGTGAAGATAGCGAATCCTGTTGAATTCGAAACAAGCATTGCCGCTACTTATGAATGGATCACAACCGATTCAGCGGATCTAGCCAATACGGACGGCTCTAAAGTTAAACAAGAATATTGTAAAACCATAGCTGACGAATGGGTTATACTACCGCCTAATGCTGCAGAACATACTTCACCTGTAACACCTTGCCTAGACTACGACGGCCCCGAGTGGGTAATCACTGATACCGTAAAGGATACAGATTATACAGTTCAGACTAGCCCCGATTCTAAAAAGTCTCGACCAAATAGACGCATTAGACACCAACAAAACAACATGGAAGGATATCAATTCGTCTCTAAACCTGTCTCAAAAGTTTCGAGAGTTGACAAGCCCGCTTCTAAATTGATTCGAACTAGGAGACAGCAACAAAACAACATGGAAGGATATCGATTTGTCTCAAAGCCTGCGGTAAATGCTATAAGAGTTGAACAGCTAAAAAGGGACGGCGATCGTATCAAAGAACCTGGTGAAATGTGGCTTAAGTTGCCTAAAAGTCCAAAAGCGTTGTTGGATACTACGGATAAGAACGCCGTGCTCTTACTTCGTCACACTACAGCAATCCCTTTAAAAATGGAGAACCTTAAATCGACCATTCCATGCTTTGCGTGCGGACAGAAATTCCTTGATCCTTTTCTATTCAGAGACCATTTCATTGCAGAGCACCCGTCGGTTGACAAGGTTATTGGCTTTAACAGTAAAATGATCAAAACGCGGGCCGATATAACGGACCTAAGCTGCCTGTTATGTACGCAACCCCTTGATAATTTAGAAATAGCGGCGGCACATCTTGTCAAGGAGCACCAAATAGAGATCGATCTAAAGGAGAAGCTCGGTCTGGTGCCGCTCAAATTCCCAGAAAGGGGACTGTGTCAATGCGCTGTCTGCGGTTTAAAGGTTGTTACGTTCAGAGAACTGTACAGGCACTCTGGCACACATTTCTCGTACCAGATTTGCGAAGTGTGTGGCATGCAATTTGAGACACCGAATACATTAAAATTGCATGTAAAAACAAAGCATATTGAAGGACGGTTATGTATTAAGTGCAAAGTTGTATTCCCTTCCGACAAGGAGCTGAGCCAACACGTTAAGGAAGTGCGCTCTTGCAATCCAGGCTATTGCAAGATTTGCGATAAACCATTCGGGTATTTCACACGACTACAGAAGCACAGAGAGGCAGAGCATGGCTTTGAAAAAAAGGTTTATCCATGCTCCGTGTGTGAAACAGTGTTTGAGAAACGAATGCagctttattttcatttcaaacaGAAGCATACAGATAGTTACAAGTGTAAAATATGCAACAAAAAGGTTTGTGGGCCTACAGGCTTGAAGCAACATATGAGAACTCACAGTGGTTCGCCGTCAAAGGCTCGCAGCTCCccctga
- Protein Sequence
- MFCLDEDGTEWVITDTVKDTDTVQNSSDSNNTRLKTHQQNKQRYRFVSDPAPNVSRADKPDSKLTQTMSHKQNNMEGYRFVSELAPKVSRLDEPASKLTRTLKQEIIKGYRFVSDPVASVSRLDKPASKLTRTWRQEIIKGYRFVSDPAASIPRFDKSASGVDQLKWNRVGIEGAGEVLLKTPKRPKPLLDISSLSIADQNAVLLLRNTTAVPYRIENVRSIIPCFACGCKFLDPLLFRDHFIAEHQSVDKANGLYGKHRIQTRVDITDLSCLLCTQPLDNLDEAAAHLVQMHKIGIDLNEKLGLVPLKFPEKGLWQCAVCGIKFSAFRELYRHSGTHFANQICEVCGMQFEAQYTLNLHVKTKHVKGRLCIKCKAIFPSSEALRQHVKEERSCSNGYCKICDKAFGYWQSLQKHREAVHGVEKRIYSCSVCQKVFEKRMQMYLHFKQKHTDSYKCKICNKKVCGSSDEEWTTTEVKIANPVEFETSIAATYEWITTDSADLANTDGSKVKQEYCKTIADEWVILPPNAAEHTSPVTPCLDYDGPEWVITDTVKDTDYTVQTSPDSKKSRPNRRIRHQQNNMEGYQFVSKPVSKVSRVDKPASKLIRTRRQQQNNMEGYRFVSKPAVNAIRVEQLKRDGDRIKEPGEMWLKLPKSPKALLDTTDKNAVLLLRHTTAIPLKMENLKSTIPCFACGQKFLDPFLFRDHFIAEHPSVDKVIGFNSKMIKTRADITDLSCLLCTQPLDNLEIAAAHLVKEHQIEIDLKEKLGLVPLKFPERGLCQCAVCGLKVVTFRELYRHSGTHFSYQICEVCGMQFETPNTLKLHVKTKHIEGRLCIKCKVVFPSDKELSQHVKEVRSCNPGYCKICDKPFGYFTRLQKHREAEHGFEKKVYPCSVCETVFEKRMQLYFHFKQKHTDSYKCKICNKKVCGPTGLKQHMRTHSGSPSKARSSP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00704454;
- 90% Identity
- iTF_00704454;
- 80% Identity
- -