Basic Information

Insect: Eupithecia subfuscata
Gene Symbol: mRpS10
Assembly: GCA_963564075.1
Location: OY751119.1:4941300-4944024[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.4 32 6.0 0.6 2 21 197 216 196 217 0.93

2 8 0.012 0.96 10.9 0.8 3 23 225 246 225 246 0.98

3 8 7.4e-05 0.0059 17.8 1.1 1 23 272 294 272 294 0.96

4 8 0.005 0.4 12.0 3.0 1 23 300 322 300 322 0.97

5 8 0.0018 0.15 13.4 0.9 1 23 328 350 328 350 0.99

6 8 2.1e-05 0.0017 19.5 3.0 1 23 356 378 356 378 0.99

7 8 0.00044 0.036 15.4 1.4 1 23 383 406 383 406 0.95

8 8 0.0097 0.79 11.1 2.3 1 22 412 433 412 433 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.4	32	6.0	0.6	2	21	197	216	196	217	0.93
2	8	0.012	0.96	10.9	0.8	3	23	225	246	225	246	0.98
3	8	7.4e-05	0.0059	17.8	1.1	1	23	272	294	272	294	0.96
4	8	0.005	0.4	12.0	3.0	1	23	300	322	300	322	0.97
5	8	0.0018	0.15	13.4	0.9	1	23	328	350	328	350	0.99
6	8	2.1e-05	0.0017	19.5	3.0	1	23	356	378	356	378	0.99
7	8	0.00044	0.036	15.4	1.4	1	23	383	406	383	406	0.95
8	8	0.0097	0.79	11.1	2.3	1	22	412	433	412	433	0.94

Sequence Information

Coding Sequence: ATGTTTCAATGTTGTAATGATGTGCAAGTTGGTGACAATAGCGGAGAAGGTACGTCGTCTCAAAACGACAAATTCGCCGAAGTTGATGTAAAAATAGAGCCGCTGGCCCACGATACGTGCAGAATATGCTTGAAAGAAGGCAAGTTGGCCATATTCGGGGCGAATGCCTCTGGGGTTCTGTGCGAATCCATTTACGAAATTGCAGGTGTAGAGGTGACCTATGAAGACCCTTACCCTAAATCTTTGTGTCAGACTTGCTATGCCTTACTACAAGGTGCTATTGTATTCAGAAGAACAGCACTTAGATCAGAGAGAAAACTGAAAAAGTTAGAAATCCATAGTGATGATGATATCAAAGATGAAGCAGAAGAGAAAAATACTGAACTGAATgaacaattaaaaaaacaaatatggtTTGCTAACAGTGCGCTCAAGGAGAGATTACTGAAAAAGATTAATCCTGATCTCGATTGTGATATAGATGACTTTGAGATCTGCCCTGATAGTGACAGTGCAAATAATGTAACAAATTGTGTAACAGAGAACAAAAAGACAAAAACGAAACGTTCAAAAAAACGAAAATGGATAAAGTGCTTATCTTGTGATGCTAATTTCTATACTTTCACAGAGTTTAGCAAACATAGAAAAGTTTGCAGGAAAATAACTTTGGGGTGTGCAGTATGCAatgaaaaattcaaaaagtatCAAGACTTTGCAGACCATAAACGGACAGAACATGAAAAAAAATCACACAATAAATCCAAAAAACCTGAAGTTACAAAAACTCCAAAGCCTTGCAAAGAAAGAGCTCCTCATGTATGTGACATTTGTGGAAAAACTTTTGCTACAAAGGGCATTTTCACCCGACACCGATCAGTACACTTCAATGAAAAGCCATTCAAGTGCACGATGTGTACTTACCAATGCAGGTTGAAAGCTGCTCTTAAACGGCATCAAGTGATACACTTCAATGACCTGCCAttcaagtgtgccttgtgcccATACCGGAGCAGGTTGAAAGAGTCTCTCACAATGCACTTGAGATCACATACAGGGGAGAAGCCCTATCAATGTCACCAATGTCCTTCCAGGTTTGTTAGCAGAAGTAACCTGAGCAAACATGTGATGCGGCACAAGGATCATAGCTTCTGCTGTGAAGTGTGCAGCAAAGGTTATTACACGAAAAAGGAATTAGAGGTTCACATCAAAGATGATCATACGGAGGGGAAGCGTCATGTTTGTAGATTCTGTGAAAAGTCATTTGCACATCGTAATGCTATGATGAAACATGAGCGGAAGAGTATCTGGCGTACTGCACCCCTGGTTCAAAGGACCTTTCCAGCCAGCTATGCTACATTGAGGACCCTAACATCAGTAACTCCTGATATAGCCAAACCCATAGAAAATGTTCCTTTTCCTACCATTGAATTGGACAAGTTGTACAAGCGGGTTGAATTGGAGATGAGAGGCGTTGACCCTGCAGTTTTGTTGAGCTACTCTTGGTTCTGTGTGGCTGCTGCGTCTCATTTAGGCATTGAAGTCACTAAAAGCTGGGCACTGAGAAAAGCAGAGAAAGAGCGCCTCACACTCCTACGATGTGTTCACATTTACAAGAAACATCGAGTACAGTACGAAGTTCGGTCTTACTTTAGATTTATCCACCTTCAAAGGCTTACTGGTTCCACTTGTGACACATACTTAGAGTACATTCAGAGGAATCTACCAGAAGGTTGTGCACTAAAGGTAACGAAGATTGAATGTCAGAGGAAACCGGAGCATCTAACACCACCTAGTCAATAA
Protein Sequence: MFQCCNDVQVGDNSGEGTSSQNDKFAEVDVKIEPLAHDTCRICLKEGKLAIFGANASGVLCESIYEIAGVEVTYEDPYPKSLCQTCYALLQGAIVFRRTALRSERKLKKLEIHSDDDIKDEAEEKNTELNEQLKKQIWFANSALKERLLKKINPDLDCDIDDFEICPDSDSANNVTNCVTENKKTKTKRSKKRKWIKCLSCDANFYTFTEFSKHRKVCRKITLGCAVCNEKFKKYQDFADHKRTEHEKKSHNKSKKPEVTKTPKPCKERAPHVCDICGKTFATKGIFTRHRSVHFNEKPFKCTMCTYQCRLKAALKRHQVIHFNDLPFKCALCPYRSRLKESLTMHLRSHTGEKPYQCHQCPSRFVSRSNLSKHVMRHKDHSFCCEVCSKGYYTKKELEVHIKDDHTEGKRHVCRFCEKSFAHRNAMMKHERKSIWRTAPLVQRTFPASYATLRTLTSVTPDIAKPIENVPFPTIELDKLYKRVELEMRGVDPAVLLSYSWFCVAAASHLGIEVTKSWALRKAEKERLTLLRCVHIYKKHRVQYEVRSYFRFIHLQRLTGSTCDTYLEYIQRNLPEGCALKVTKIECQRKPEHLTPPSQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00701460;
90% Identity: iTF_00701460;
80% Identity: -