Basic Information

Gene Symbol
ZFY
Assembly
GCA_963564075.1
Location
OY751126.1:393786-395718[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 11 0.001 0.082 14.2 1.0 2 21 159 178 158 179 0.95
2 11 1.3 1e+02 4.5 1.9 3 23 187 207 186 208 0.92
3 11 0.054 4.4 8.8 0.2 1 23 212 235 212 235 0.94
4 11 0.0058 0.47 11.8 0.4 2 23 241 262 240 262 0.97
5 11 0.025 2 9.8 1.0 2 21 266 285 266 286 0.92
6 11 0.00039 0.032 15.5 0.9 2 23 324 346 323 346 0.95
7 11 0.21 17 7.0 0.4 3 23 354 373 353 373 0.94
8 11 0.00056 0.045 15.0 1.9 1 23 378 400 378 400 0.98
9 11 0.00076 0.062 14.6 2.8 1 23 406 429 406 429 0.97
10 11 0.00024 0.02 16.2 0.6 2 23 439 461 439 461 0.96
11 11 0.00079 0.064 14.6 5.1 1 23 471 493 471 493 0.99

Sequence Information

Coding Sequence
ATGAGTCGCCAAGTGGACGTAAAGGCACTGATATCACATATCGTGAAAGGTGACGGCTTAGACAAATGCAGGGTTTGCATGGGAGATACATCACAAGGACAAGTACACCTCACTGACACAGTAATGATGGACGGAGACAAAGCTGTTACGCTCTCAGAGCTTCTCGAAGTCATCACAGGAGTCGAGGTGGAGTTGGAGGAAGCGCTACCACCCTCCTTATGCCTAACCTGCTCCGTTGCTGCCTTCGAGGCAGCTGAGTTCAAGACCCTGGTCCAAAGGGCCCAGAGGCAGTGGAGCAGCATGGTCAACCTGTTAGAGCACATTCCTGACCACAAATACGCCCTGACTAGTCATAAAATCCTCGCAGTTCTTTCTAATAACTGTATAAAGATTTCTGATGAAGGAATAAAACCACCTGTTGAGAAGCCGAGAGAGAATCCAATACTGAAAAGGCCAGGAAAGTTACAAGAATGTCAATGCCCAACTTGTGGGAATAAGTTTCAGTATGCTGTGCAGCTTAATAAGCATTTGAGGGACTCCGTAGACCTGCTCCGGGCTTGTCACATCTGTGCCAAAGTAATGAGTAGAAGCAAGCTGATAAAACATGTCAAAGAAGAGCATCATTTAAAAACATACCCCTGTAAGAAATGCCCAGCTATACTAACCAATGCCAAACTTTTTACTGACCATAATTTAAAAGCACATGCAAAAGGGAGTATTAAATGTGTTGATTGTAGCTATACATTCCTGACCCCACAAGCATTGAACGCCCATCAACACATACATACCCAAAGATCCTGTCCAAACTGCGACAAAATCTTTCAGAACCAACCTTGCTATTCCTACCACATCCAAAAATGCTGCAAATTAGACCTTAAACACAAGAGCAAACAAGTACCTGTAACCTTACGGAACAAAGAAAACAAGCAGGTTAAAATGGGAAAACGAGGCAGCATCACCCATCAATGCATCTGTGATTATTGCAATAAAACTTATGCTGCCAAAAAGTTCTTGACCGCTCATATACAAATAGTACACTTGAAGAATACACACAGACCCTGTGTTTACTGCGGAAAGCAGTATGCGGCTGCTCATATGTCTACACATTTAAAGAGTCATAAGAAGTCAAGCTTTAAGTGTGAACATTGCGGGGTAGTCCTTAAATCAAAACTAGGTTTCAAGCAGCATTTGAGACTTCACACCGGAGAGAGACCTTATGAATGCAACCTCTGTGGAGAACACTTCTCGTCTTCATCGAGGATGTCAGAGCACAAACGGAACAAACACTTTAAATCTCAAATTGTCTTAAAAAACGTCTGCACAATTTGCTCGGCTAAGTTTAGACTGCCGAGTAAACTTAAAATGCATATGAATAAGGTGCATAAATGCAACGGAACGGAAGAAATCAGTTATAAGTGCGAGTTATGCCGCGAGatgtttgacagctgtcacagTCTGATGAACCATTTAAGGAATCACTAA
Protein Sequence
MSRQVDVKALISHIVKGDGLDKCRVCMGDTSQGQVHLTDTVMMDGDKAVTLSELLEVITGVEVELEEALPPSLCLTCSVAAFEAAEFKTLVQRAQRQWSSMVNLLEHIPDHKYALTSHKILAVLSNNCIKISDEGIKPPVEKPRENPILKRPGKLQECQCPTCGNKFQYAVQLNKHLRDSVDLLRACHICAKVMSRSKLIKHVKEEHHLKTYPCKKCPAILTNAKLFTDHNLKAHAKGSIKCVDCSYTFLTPQALNAHQHIHTQRSCPNCDKIFQNQPCYSYHIQKCCKLDLKHKSKQVPVTLRNKENKQVKMGKRGSITHQCICDYCNKTYAAKKFLTAHIQIVHLKNTHRPCVYCGKQYAAAHMSTHLKSHKKSSFKCEHCGVVLKSKLGFKQHLRLHTGERPYECNLCGEHFSSSSRMSEHKRNKHFKSQIVLKNVCTICSAKFRLPSKLKMHMNKVHKCNGTEEISYKCELCREMFDSCHSLMNHLRNH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00705452;
90% Identity
iTF_00704406;
80% Identity
-