Basic Information

Insect: Eupithecia subfuscata
Gene Symbol: prg
Assembly: GCA_963564075.1
Location: OY751097.1:12690465-12692409[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 1.6 1.3e+02 4.2 0.5 2 14 206 218 205 228 0.79

2 10 0.038 3.1 9.2 1.3 1 23 234 257 234 257 0.95

3 10 3.3e-06 0.00027 22.0 1.4 1 23 263 285 263 285 0.96

4 10 3.3e-07 2.7e-05 25.2 2.8 1 23 291 313 291 313 0.99

5 10 6.3e-05 0.0051 18.0 0.0 1 23 319 341 319 341 0.97

6 10 0.00076 0.061 14.6 1.3 1 23 347 369 347 369 0.96

7 10 0.00011 0.0089 17.3 1.0 2 23 458 480 457 480 0.94

8 10 0.00017 0.014 16.6 1.4 1 20 486 505 486 508 0.94

9 10 3.9e-05 0.0032 18.7 2.9 1 23 514 536 514 536 0.97

10 10 0.0018 0.15 13.4 0.0 3 23 545 565 543 565 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	1.6	1.3e+02	4.2	0.5	2	14	206	218	205	228	0.79
2	10	0.038	3.1	9.2	1.3	1	23	234	257	234	257	0.95
3	10	3.3e-06	0.00027	22.0	1.4	1	23	263	285	263	285	0.96
4	10	3.3e-07	2.7e-05	25.2	2.8	1	23	291	313	291	313	0.99
5	10	6.3e-05	0.0051	18.0	0.0	1	23	319	341	319	341	0.97
6	10	0.00076	0.061	14.6	1.3	1	23	347	369	347	369	0.96
7	10	0.00011	0.0089	17.3	1.0	2	23	458	480	457	480	0.94
8	10	0.00017	0.014	16.6	1.4	1	20	486	505	486	508	0.94
9	10	3.9e-05	0.0032	18.7	2.9	1	23	514	536	514	536	0.97
10	10	0.0018	0.15	13.4	0.0	3	23	545	565	543	565	0.92

Sequence Information

Coding Sequence: ATGGAAGATTCCTACATCATCGCGAACTTCCACGCTCTGTGTCGCTTATGTCTGAACAAAAGCGCGCTAACGGTGTCTATTTACGGGGCTGCGCCCGATGACGAAGCCAAAGTATTGCTAACCTCCAAAATCGCTAAATGCTGTGAACTacagGTTGATCCCAATGATGGCCTCCCAGGAAAGATCTGCTACAAGTGTCTTCTAAAATTAGAAAAATGTTCCAAGTTTAGAACACAATGCCTACAGAATGAGAACAGGCTCAGACAGATAACCAACAGTGTGAATGACCGTGACCACTCCAACTCCTCGGAACTCAGTAATTACAACTATAGCAATACTCATGACATAAAACCAAAGCCCGAAGATTACATTGTGGAAGACAGTGTTGTTATGGTGGTGGATCCCAGTCTTGACTATGACTCATCAGAAGATTCTGAACAGGAACCACAACCAGGAACATTCCAGAACAACTATAGGAAGATGAGACAGCAAATACAAAATCACCAACATGAAGATTTTGAAAGGGAAATTAGTCCTGAACATGATCTCAATGAAAGAGAAATGTCCCCTGAACGAGAAACTACATCAGAGTCTTCCTTCTTCAAAAATGTCTCCATGTGTCAATATTGTGACCAAGCTTTTATTTCAACAGAAAAATGTGCAGAGCATGAGCTTGCATACCATGACCCCAAGTTACCCTACAAATGTGTGGAATGCAGTTTAGTGTTTGCAGAACGAACTCAATATGTACATCACTCTAAACAAGTACATGGCAATGATAAACCATACCACTGCCCTGAATGTGAGAAAAGCTTTGGCAGACGTTCTGACTTAAGAAAGCATTCCATCGTTCACACCGGCATAAGACCATACCAGTGTCAGTACTGCTTGAAAAGTTTCTCTCGCAACACAAACTTGAGTAAACATCTCCGGATCcatgctggacataagcctcatGTATGCCCATTGTGTCCCAGAAGCTTTGTGGCTAAAGGAGATTTAGCGCGTCATGTCCTCGTTCACTCTGGACAGAAGCCATACAGATGTAGAAAATGCCCTCTAACATTTGGACGGCGAGATAAACTCCTCAAGCATGAAGTCAGGCATGGACCTCCATCCCCAGAACACACAGACAATGATAATCAAGATATGCAAGATATGGTTGTCAATGTTAATCCCTTCAGCAATCTCATGACTTCCCCTACCAGGAACCAAACTGATGGATCTAACACTGACTATGACCTCCCCAGGGTCCCAGATCATATATCTGGTGAAAGCAGCTTCAGCAGAGTACAGAAAAACCCCTCTACATCTAAGCAACAAAATTCTCCACCAAAAAAGCAACTTGCTAAGAATAGACCTAAGAATATTAAATGCCACCAGTGTCCCAAGAGATTCTCATCTTTAGATGCTTATAAAACACATGTGACAGTTGCCCATATTGGGTCTCGCAACTTTCAATGCAAAATTTGTTTTAAGAAGTTTGCCCGAAAAAGAGAACTAGATCGCCATACACCTATTCACTCTGGTATGAAACCATTTTCATGCAGTCAGTGTGACAAGAAATTTAACAGAAAAGACAAACTTGACAAACATGAGCAAAGCCATGAATGTTTGGTTGTGAATATGCCTTGTATAGAATGTGGTGCCACATTTGAGAAGAAAGCAGATTTGGTTGCTCACATCAAATCTCATTTCACTGATAATTTTGATGATAAATTATCACAGATCAAGAAGGAGGATGAGCCTGATTTTCCTCTTGATGACAGCTTTTATGATTTAGAAACATGA
Protein Sequence: MEDSYIIANFHALCRLCLNKSALTVSIYGAAPDDEAKVLLTSKIAKCCELQVDPNDGLPGKICYKCLLKLEKCSKFRTQCLQNENRLRQITNSVNDRDHSNSSELSNYNYSNTHDIKPKPEDYIVEDSVVMVVDPSLDYDSSEDSEQEPQPGTFQNNYRKMRQQIQNHQHEDFEREISPEHDLNEREMSPERETTSESSFFKNVSMCQYCDQAFISTEKCAEHELAYHDPKLPYKCVECSLVFAERTQYVHHSKQVHGNDKPYHCPECEKSFGRRSDLRKHSIVHTGIRPYQCQYCLKSFSRNTNLSKHLRIHAGHKPHVCPLCPRSFVAKGDLARHVLVHSGQKPYRCRKCPLTFGRRDKLLKHEVRHGPPSPEHTDNDNQDMQDMVVNVNPFSNLMTSPTRNQTDGSNTDYDLPRVPDHISGESSFSRVQKNPSTSKQQNSPPKKQLAKNRPKNIKCHQCPKRFSSLDAYKTHVTVAHIGSRNFQCKICFKKFARKRELDRHTPIHSGMKPFSCSQCDKKFNRKDKLDKHEQSHECLVVNMPCIECGATFEKKADLVAHIKSHFTDNFDDKLSQIKKEDEPDFPLDDSFYDLET

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00318316;
90% Identity: iTF_00699477;
80% Identity: -