Basic Information

Insect: Eupithecia subfuscata
Gene Symbol: -
Assembly: GCA_963564075.1
Location: OY751110.1:7140759-7151796[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.038 3.1 9.3 2.1 1 23 215 237 215 237 0.93

2 11 0.0043 0.35 12.3 1.8 2 23 243 264 242 264 0.97

3 11 3.1e-05 0.0025 19.0 0.1 1 23 270 292 270 292 0.97

4 11 1.3e-06 0.0001 23.3 2.0 1 23 301 323 301 323 0.97

5 11 2.4e-06 0.00019 22.5 0.2 1 23 329 351 329 351 0.98

6 11 0.0024 0.19 13.0 8.7 1 23 357 379 357 379 0.96

7 11 1.2e-09 9.5e-08 32.9 0.4 1 23 385 407 385 407 0.99

8 11 1.5e-05 0.0012 20.0 0.6 1 23 413 435 413 435 0.99

9 11 5.6e-05 0.0045 18.2 1.1 1 23 441 462 441 462 0.98

10 11 0.024 1.9 9.9 1.9 1 23 468 490 468 490 0.92

11 11 0.0035 0.28 12.5 0.3 1 21 496 516 496 517 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.038	3.1	9.3	2.1	1	23	215	237	215	237	0.93
2	11	0.0043	0.35	12.3	1.8	2	23	243	264	242	264	0.97
3	11	3.1e-05	0.0025	19.0	0.1	1	23	270	292	270	292	0.97
4	11	1.3e-06	0.0001	23.3	2.0	1	23	301	323	301	323	0.97
5	11	2.4e-06	0.00019	22.5	0.2	1	23	329	351	329	351	0.98
6	11	0.0024	0.19	13.0	8.7	1	23	357	379	357	379	0.96
7	11	1.2e-09	9.5e-08	32.9	0.4	1	23	385	407	385	407	0.99
8	11	1.5e-05	0.0012	20.0	0.6	1	23	413	435	413	435	0.99
9	11	5.6e-05	0.0045	18.2	1.1	1	23	441	462	441	462	0.98
10	11	0.024	1.9	9.9	1.9	1	23	468	490	468	490	0.92
11	11	0.0035	0.28	12.5	0.3	1	21	496	516	496	517	0.95

Sequence Information

Coding Sequence: ATGGAAACCGAAGATCAACAAAACCAAGAAGGTGACAACATTCATTTGGAATTAGAAATTCCACTAGAATTGCTGCAGTATTTGAATTCTAAAGGTTGCGACCTACAGAATATATGCCGACTTTGTCTTACCGCCGGTAATGAAGTCCCACTGTTACTACCTAGCAGTCAGTTCTGTGTCACAGAGGAGGTGTTCCAAGCTATGACATCGGTTCAGATAAGTTCAAATGATGATCTTCCAAGCAGAATATGTTCAAACTGCCAAATGGAACTGGATCACTACTTCAAATTCAGAAGTAAATGTGAAAAATCTGATTATCTACTTCGGTCCCTTTTAAAAGAAGGACTCACCATCAAAAATGAACCTAAGTGTGAATCAGATGGCACTACTCCTAAAGAGGAAGATatgaaaattatagaaatttcACTTAAAACAGATAAAACAATTAGGCATTCCAAATCCAAGGACTATGAAGACATCTTAAAAAGTGAAGAAGGCTTAGCAGAGAAAGTTTACAATTGTTATTCAGACCCTAATGACTACCATGATGACCTGAAGAGTATATTGAGTGAGGATGAAGCATTATGTATTGTCCAGGACACATTGAAGAATGAAAAATCCGTTGATAAATACAGCAATCCATATCCTTGCAAGGAGTGCAAGCAAAAATTCCATTCAGAGTTTGATTTGAGTCTCCACAGTATTTTACACAACACAGGCCCATGGAAATGCAGTATTTGCTGTAAAGATTTTAACGAGAAACCAGCCCTACGTCGTCACATCCAGCGGCACATGGACAGCAAACGTTACGCGTGCGACGCGTGCGGGAAAACGTTCGTAGAGTTGTACGCGCTGAAACGACACGCGCGCGTGCACACCGGCGAGCGGACAGAGAAGAAACATGTTTGCACTGAGTGTGATAAACGTTTCAGTGACAGCAATCAACTAATGGTCCACATGACTCGCCATAGCGGAGAGAAGCCATTTCAATGCGTCATCTGCGGCAAATCCTTTCCGTCAGCGCGTCTCCTGCGCTCACACCGACTCGTGCACTCGGACCTCAAGAAACACGCCTGCGAATACTGCGACAAGCGGTTCCGCCACGAGTCGACCCGGAACACGCACCACCGGACGCATACGGGCGAGAAGCCCTACGTGTGCTCGATTTGCGGGAAGAGTTTTATACAGGCTTCGAATCTACGCCTGCATATGCGGACTCATACAGGGGAGAAGCCGTATCCTTGTTCGCAATGTGACAGCAGATTTTCATCTGGATCGACTCTCAAAGCACACCTGCGCACGCACACCGGGGAACGACCTTACAAGTGCAAAGTTTGTGGGAAGAGTTTCGCACGAGTCAACATGAAACTACACATGCGGCTACATTCCGGAGAGAGGCCGTTCGCATGTAGCGCTTGTCCTAAGAAATACGTGAGCGCGGCGCATCTCCGCTCGCATTGCCGTGCGCATACTgGTGAGAAGCCTTTCGAGTgtgccaagtgcgagtcgaagtTCGCCACGAAAACTCTACTCATAAAACATTTAcaatcaaaaaaaaagttaagcaCAAAACCACCAATCAAGCAAGAGCAGCAGGACAACTCTTTAGATATTTCTAGTGTAAATGAATTCTCAACAATGCCAGTCCAACAAATTGATAATGACATACCAAATGCTATTGTAGAGTTAACTCTCGGCACGCACGAAACTTTAGACGTTAGTCAGGAATTGGTGTTTCAAGAGAACAATGTAAAGACTCATGTTATAATGCTTGGCAGTAGTAACACGGTCAGTTTTGTGAGCAACAATGAAACTGGAGAAAGCGGTTTGAATATTGTCACTGTTAATGAGATTGGAGTCAGCATGTCTACGAAAATGGAGAAAGGGACTTGA
Protein Sequence: METEDQQNQEGDNIHLELEIPLELLQYLNSKGCDLQNICRLCLTAGNEVPLLLPSSQFCVTEEVFQAMTSVQISSNDDLPSRICSNCQMELDHYFKFRSKCEKSDYLLRSLLKEGLTIKNEPKCESDGTTPKEEDMKIIEISLKTDKTIRHSKSKDYEDILKSEEGLAEKVYNCYSDPNDYHDDLKSILSEDEALCIVQDTLKNEKSVDKYSNPYPCKECKQKFHSEFDLSLHSILHNTGPWKCSICCKDFNEKPALRRHIQRHMDSKRYACDACGKTFVELYALKRHARVHTGERTEKKHVCTECDKRFSDSNQLMVHMTRHSGEKPFQCVICGKSFPSARLLRSHRLVHSDLKKHACEYCDKRFRHESTRNTHHRTHTGEKPYVCSICGKSFIQASNLRLHMRTHTGEKPYPCSQCDSRFSSGSTLKAHLRTHTGERPYKCKVCGKSFARVNMKLHMRLHSGERPFACSACPKKYVSAAHLRSHCRAHTGEKPFECAKCESKFATKTLLIKHLQSKKKLSTKPPIKQEQQDNSLDISSVNEFSTMPVQQIDNDIPNAIVELTLGTHETLDVSQELVFQENNVKTHVIMLGSSNTVSFVSNNETGESGLNIVTVNEIGVSMSTKMEKGT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00697591;
90% Identity: iTF_00704262;
80% Identity: -