Esub029411.1
Basic Information
- Insect
- Eupithecia subfuscata
- Gene Symbol
- -
- Assembly
- GCA_963564075.1
- Location
- OY751126.1:6876095-6887048[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 34 0.039 3.2 9.2 0.7 1 23 33 56 33 56 0.93 2 34 0.025 2 9.8 0.5 3 23 88 109 86 109 0.94 3 34 0.4 32 6.1 0.7 2 23 132 154 132 154 0.95 4 34 0.005 0.41 12.0 2.7 1 23 159 182 159 182 0.97 5 34 1.9 1.6e+02 3.9 0.1 1 23 187 210 187 210 0.89 6 34 0.00046 0.037 15.3 1.0 1 23 215 238 215 238 0.94 7 34 0.00042 0.034 15.4 0.4 2 23 246 268 245 268 0.97 8 34 0.18 14 7.2 0.0 2 23 275 296 274 296 0.96 9 34 1.2e-06 9.6e-05 23.4 0.6 1 23 302 324 302 324 0.95 10 34 1.5e-05 0.0012 20.0 2.1 1 23 330 353 330 353 0.95 11 34 1.9 1.5e+02 3.9 2.4 1 23 458 479 458 479 0.96 12 34 0.22 17 6.9 0.2 3 23 556 577 554 577 0.94 13 34 9e-05 0.0073 17.5 0.3 1 23 582 605 582 605 0.95 14 34 0.25 20 6.7 5.6 1 23 608 631 608 631 0.95 15 34 0.0012 0.097 14.0 0.6 1 23 637 660 637 660 0.94 16 34 0.008 0.64 11.4 0.6 2 23 668 690 667 690 0.95 17 34 0.13 10 7.6 0.6 1 23 695 717 695 717 0.97 18 34 7.3e-07 5.9e-05 24.1 0.4 1 23 723 745 723 745 0.98 19 34 0.12 9.6 7.7 0.6 1 23 819 841 819 841 0.97 20 34 1.1 86 4.7 0.1 2 23 867 889 866 889 0.93 21 34 0.074 6 8.3 0.1 2 23 912 934 911 934 0.95 22 34 0.00098 0.079 14.3 0.2 3 23 942 963 941 963 0.97 23 34 0.0022 0.18 13.2 0.6 3 23 970 991 969 991 0.95 24 34 0.015 1.3 10.5 2.3 1 23 997 1020 997 1020 0.98 25 34 0.0016 0.13 13.6 2.2 2 23 1027 1049 1026 1049 0.95 26 34 0.035 2.9 9.4 1.3 1 23 1055 1077 1055 1077 0.94 27 34 0.012 0.96 10.9 1.5 1 23 1083 1106 1083 1106 0.89 28 34 0.2 16 7.0 0.2 1 19 1154 1172 1154 1174 0.95 29 34 1 82 4.8 0.1 2 23 1204 1226 1204 1226 0.94 30 34 0.074 6 8.4 0.2 2 23 1249 1271 1248 1271 0.95 31 34 0.094 7.6 8.0 0.0 1 23 1275 1298 1275 1298 0.95 32 34 0.0023 0.18 13.1 1.2 2 23 1302 1324 1301 1324 0.95 33 34 0.11 9 7.8 0.4 2 23 1329 1351 1328 1351 0.93 34 34 0.0015 0.12 13.7 1.0 2 23 1359 1381 1358 1381 0.95
Sequence Information
- Coding Sequence
- ATGGAACTTGCGCGTAAGTTGCTAATAAAACGGCGCAATGTCGAATACATCCTACAATACAGCAACGTCACTCCTTTCACGTGGCACAAGTCCAAATATAAATGCTTCTACTGCTCAGAAGTTATGAAAGACCCCAGTTTTCTGAGACAACACACCGCTGAGAACCACGCGAATGCTAACCTAGAGCTAATAATTTACGATAGAACAAAAAGCAATAGGAATAAAGACGCAGCGATCAAGATAGACGTCACTGACATATGTTGCAAGCTCTGTCCGCAATCCCTGAACTCACTGGAAGAACTTATCCATCATATAATCATAGCTCATGATGCTGAGTATAATGTTAATATCCCGAACTGTGTGCTACCTTTTAAACTGGATAGGGACGCCCCTACTTGCGCCACCTGTGATTCTAAATTCGCCTTCTTTGAGTATCTGTTGCGACACGCAAATAAATACCACCTCTCCCACCAATTCGTTTGCGATGTCTGCGGAACCAGCTTCCAAGGGGAGATCCACCTCAAAATGCATCATAGATACTACCACCGCGAAGGTGGATACATCTGCGATACTTGTGGCATCAGTCTCGCGACGATATCTAAGAAAATCTTACACGAAAAGAACGTTCACAACGTTAATCTCTATACGTGCCCGCACTGCCCGGAAACCTTCAAAAGCCCGTATCTAAAGAAGCTTCATCTAGCCAACGATCACGGAGTCGAGGAGCTCAAAATCAAGTGCCCGTATTGCTTCAAAGTGTTCCCGCAAGAAAGCATAATGTCGAGGCATATGAGACGTGTGCATTTACGAGAGAAGAATGTAGAGTGTGGCGTCTGCGGTGACAAATTCTTTGGTCCCTACGACGTGAAACTTCATATGCTAAAACATAATGGGGATAAGAAATTTATTTGCACAGTTTGCGGAAAAAAATTCGCCAAAAAAAGCAACCTAAACTCTCACATGGTCTTGCACACGAGAGAAAAGAACTTCTTGTGTCAAGTTTGTGATAGATCCTTTGCGCATCAAGCTACTTTAAAGATGCATATGCGTAGCCGACATCAGCATAATATTGACTTCAAGAATGAAGTTGAAGGTGTAGGGCTTGAAGATGAGAGGATAGAGTATGATGATGAACTGAAGAATGACGATCAAGAAGAGGTGATTGATCTTCAGGATCAGAATATTGAAGTGATTGAAGGACTGAATGATGATGAAATCACTGAGCTTATACAGCAGGGGGGCTTGGAGGTGCAGGTGCACAGTAGCAACACACAGGGCAGTTATCTGGACCGACTTGGTATACTCAGACGCAACATTTTCACCGTCCTCTGCTACTCAAACGTTACGCCTTTCAATTGGAACACGAAAGGCTTCCGTTGCTTCTACTGCTCAAAGCAGTTGCGAGAGTCCAATATCAAAGAACACACAGACAAACATAATGCTGTAGACTTGGATGGTTTCCTCAAAAAGCATGTTATAACCAAAGATATACCAGTTAAAATTGATATAACAAATCTAGCTTGCAATTTCTGTCCAGGAACCCCCATCGCGTCTTTAGATGAAATGGTATCGCATATAGTTGAATACCATAACGAATTTTATGATACAGAGACGGAACGATGCTTCTTCCCTTTTCTTCTCAAGAAAGATAACAATATAATGAATTGCGTGTTATGTGAGATGGAATTTGACAACTTTCCGTCCCTTATAACACACATGTACAAGCAGCATGTTACACACTCGTTTATATGCCAAGTATGTGGCCTCAGTTTCAAAGACCAGGTCCGCTTGAACAGGCATTTAACTGTTAGTCACATCGGCCACCGCTGCACGGTCTGCGACAAAATCTTCGACGCATATCACAAATTATATAAACATAAGGAGAAATTCCACGGTCATGTCAAAACTTACGACTGCAACCTCTGCACTGGCAGCTTTAAAAGCAACTATCAACTCAGAGTTCATCTAGGGAAGGTCCACAACGTCCAGAAATATAGAATCAAATGTGAGCAATGCGACAAAATTTGCACTACCAAAGGCGCTATGGTCTTGCATGTCCAAAGCCTGCATTCAGATATCAGATACCAGTGTGATGAGTGCGACTATACGACAGGCATCAAATGGCTGATTAAGCTACACAAGCGGAAGCACACAGCGGTCAAGGATTATATGTGTAGTATGTGTGAGAGAGCGTTCGGTCGGTCGAGCAATCTGAGAGCTCATATGAAAGTCCACGCGGGAGAACCTAGAGGTGACCAGAAAGCAAAGCCATTGATAAAACCGACGCCAGCACCTCCCAAACGACCCATCAAAAGCCTTGCACCATCCTCAAGCGTACTCGCAACAAAACCCAAAGGTTTATCCAGTAAGGACAAACGGAACATAATGATCCAAAACGTACTAGCGATTCTCCAAAAAACAACCGCCATGCCTTTCCGTTGGCTAAAGAGTTCCTACCGTTGCTTCTATTGCTACGACATCTTTCAAGAGGCGTCCGACTTAAAAGCGCATCAAACAGAACACAGTGATGATTCCATCAAGGAAAAGACAATGAACAACTATTGGGAACCTGTAGTATACATCGATATATCAAACATGAAATGTCTTCTATGCCCTGAAGAAGTAACAGATCTATACGATATGATCAACCATTTGGTCTCTAAACACAGCGTAGTTTATAACAAAGATGTAGGCACTTGTATGGTTGCTTTCAAGCTTAACAACTTTGACGTAAGTTGCCTCGTTTGCGGCGTTAGCTTCTACTCCTTCGGTCCATTGTTGAATCATACGAATAAAGACCATAAAGGAGCGTCGGTCATCCTCTGCGAAATATGTGGTCAGAACTATAAGGACCAGAATCTTTTACGACTTCACGTAAAATCAGCGCATGACAACAGTGGCATGCTATGCCCAGAATGCGGTGACAAATTTGAGACGCGATCGAAGTTAAAAACACACCAAATCAACAGCCACGGGGTCGAGCGTAAATTCAAATGCCTTGTCTGTGATCTAACCTTTGGCAGCCATTACAAAAGATCTCGGCACATGGCGACCGACCACAAAAACCGACAAGAGATCAAATGTCTACACTGCCCAAAGACCTTCGTCTTCCGCAGTATGATGATGACACATCTAAGAGACACCCATTTGAAAGTACGTAACCATATCTGCGGAATTTGCGGGTGGAAGGCTTTCAACAGTAATAGATTAAAGAATCACATGTACAAACACAGTGGGGAGAAGAATTTCAAATGTGAATTCTGTGATAAAGCGTTCACGACCCGGAAGATCATGAAGGCGCATTTCGCGAGGATGCATAAGCCCCCAGAGACAGCTCCTGTGGTTCCGATCCTGGCGCATTATGACGTCGCATTGAAGAACGAACAACAACTGGCCGCTTTGCTGATAACAATTATTCAGAACTCCACCATTATACCATTCCGATGGTACCACGGAAAGTTTATGTGCTTTTACTGTCCCACAAAACTATCCAGTTCAGAAGGACTGAGAGAGCATAACCTATGTGGACATAGTGAAATTAATATCACAGAAATTATAACCAAGTTCGTTTATAATGACAGAAGAATTAAATTAGACACTGGATTCGCGAAATGTAATCAGTGCGATGAAGAAATCTACGATATATCGGACTTTATCGAGCATTTATCGAATACCCACGACGTTAGGTACGATCCGGATATCGCCAGGCACTTTATATCCTTCAGATTATCCGACGATGAAATTAGCTGTCTCGAATGCGATGAGAAATTCAGATATTTCGGTCCTTTATTGATCCATACGAACAAAATACATTTAGACAAGCATGTTTGCGAAATTTGCGGGCAAGGAGTCGTCGGTAAAGCCAATATACTAAACCATGTCAGACAAATACATGGCGTGAAGACTTGTAAATATTGCAACGCGACCTTTCAAACCCAATACGCGTTACTTCAACACGTGTCTTCTAAGCATACGGACGCGTTAAAATGTAGTATTTGTGGTGAAATGCAACAGAATAGTTATAAAATGAAGAGGCATATGGCATTAGTGCACAATTGTAAGGATTCTCAAATAGTTTGCGAATACTGTTCAAAGATTTTCACTAGGAATAACAAGTATGTGCAGCACAAGCAGCGTGTGCATTTTAAGTTGATAAAATTTTAA
- Protein Sequence
- MELARKLLIKRRNVEYILQYSNVTPFTWHKSKYKCFYCSEVMKDPSFLRQHTAENHANANLELIIYDRTKSNRNKDAAIKIDVTDICCKLCPQSLNSLEELIHHIIIAHDAEYNVNIPNCVLPFKLDRDAPTCATCDSKFAFFEYLLRHANKYHLSHQFVCDVCGTSFQGEIHLKMHHRYYHREGGYICDTCGISLATISKKILHEKNVHNVNLYTCPHCPETFKSPYLKKLHLANDHGVEELKIKCPYCFKVFPQESIMSRHMRRVHLREKNVECGVCGDKFFGPYDVKLHMLKHNGDKKFICTVCGKKFAKKSNLNSHMVLHTREKNFLCQVCDRSFAHQATLKMHMRSRHQHNIDFKNEVEGVGLEDERIEYDDELKNDDQEEVIDLQDQNIEVIEGLNDDEITELIQQGGLEVQVHSSNTQGSYLDRLGILRRNIFTVLCYSNVTPFNWNTKGFRCFYCSKQLRESNIKEHTDKHNAVDLDGFLKKHVITKDIPVKIDITNLACNFCPGTPIASLDEMVSHIVEYHNEFYDTETERCFFPFLLKKDNNIMNCVLCEMEFDNFPSLITHMYKQHVTHSFICQVCGLSFKDQVRLNRHLTVSHIGHRCTVCDKIFDAYHKLYKHKEKFHGHVKTYDCNLCTGSFKSNYQLRVHLGKVHNVQKYRIKCEQCDKICTTKGAMVLHVQSLHSDIRYQCDECDYTTGIKWLIKLHKRKHTAVKDYMCSMCERAFGRSSNLRAHMKVHAGEPRGDQKAKPLIKPTPAPPKRPIKSLAPSSSVLATKPKGLSSKDKRNIMIQNVLAILQKTTAMPFRWLKSSYRCFYCYDIFQEASDLKAHQTEHSDDSIKEKTMNNYWEPVVYIDISNMKCLLCPEEVTDLYDMINHLVSKHSVVYNKDVGTCMVAFKLNNFDVSCLVCGVSFYSFGPLLNHTNKDHKGASVILCEICGQNYKDQNLLRLHVKSAHDNSGMLCPECGDKFETRSKLKTHQINSHGVERKFKCLVCDLTFGSHYKRSRHMATDHKNRQEIKCLHCPKTFVFRSMMMTHLRDTHLKVRNHICGICGWKAFNSNRLKNHMYKHSGEKNFKCEFCDKAFTTRKIMKAHFARMHKPPETAPVVPILAHYDVALKNEQQLAALLITIIQNSTIIPFRWYHGKFMCFYCPTKLSSSEGLREHNLCGHSEINITEIITKFVYNDRRIKLDTGFAKCNQCDEEIYDISDFIEHLSNTHDVRYDPDIARHFISFRLSDDEISCLECDEKFRYFGPLLIHTNKIHLDKHVCEICGQGVVGKANILNHVRQIHGVKTCKYCNATFQTQYALLQHVSSKHTDALKCSICGEMQQNSYKMKRHMALVHNCKDSQIVCEYCSKIFTRNNKYVQHKQRVHFKLIKF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00700319;
- 90% Identity
- iTF_00700319;
- 80% Identity
- -