Esub027832.1
Basic Information
- Insect
- Eupithecia subfuscata
- Gene Symbol
- -
- Assembly
- GCA_963564075.1
- Location
- OY751124.1:2996991-3000890[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.4e-08 3.1e-05 24.4 0.0 16 40 28 52 22 57 0.88 2 2 3.1 4e+03 -1.5 0.0 21 32 298 309 296 313 0.88
Sequence Information
- Coding Sequence
- ATGGTTAATAGatacaaaagaaaaactacAAACGCTTCGTGGGATGTCAAGATCATGAAACGTGCGATGGAAGAAGCCAGCAAGACTTCCGTCAATAGTGCAGCAAAAAAATACGGCATCAACTTGTCAACATTACAGAGGCACTTAAAGAAAGGTTGTCCCGAAAAAAAACTCGGAAGATTGGTTATAGTACCGAATAAAAATAGGCAGGCTGTCATCCCACCTTTCCCGCTCCTCGCTATCACTAGAAATATTCATGTGTACATAGAGGCTGAATGCCCGAAGTCAGGTACGAGGTACATATGCGAAGATCAGCTCAACCAACAACTAAAATCTCAGCCCGATTGCATCAGCAACATTATCCAAGGAGAATTGCCCAAAGGAAAGCCCTGCGAAATGACCACCATCGACCTGATGAAGCCCGCCATGGAGAAACTGGATGACCGCCACTACGCCATCGTGTTCCCGCAACCGACTCAGGTTCGCCTCACATGCGAACGAGAGGAGTACAACACTCTTAACGGCAGCTACTTAGCAACCATACCCCATGACTGCAAGCTGCGCACCGATGACTTCACCATCATCAACGTCAACGATCACATCAATGGACAACCTGTGAAGATAACCAAAATTCCTGTTCAGCCAGATGATGTAGGCCAACCCTATATTCTCAAGGTCAACTCCGTCAACCTGAGAAAGCTACACGATATCCAATATAAAATCCACCAGCAGGAGACCGTGCGGATAGAACAACCCTCAACGTTCTATCACACCACCATCCCCTTCTACGGTGCACTATCCGGTGCACTTGTACTCGCCCTCATCGTACTAAGTCGAAGATTGTACTTACGCCGGATAAAGGAAAACTCGAAGACAGAGATAGAGCTCACCCAAGCAGCCCCAACCTATGCTGTACCAGATTCATCTCAAAATCAGAGGAAGCTGCCAACGACATTTTTTCCCAATCTTCAAGAATAG
- Protein Sequence
- MVNRYKRKTTNASWDVKIMKRAMEEASKTSVNSAAKKYGINLSTLQRHLKKGCPEKKLGRLVIVPNKNRQAVIPPFPLLAITRNIHVYIEAECPKSGTRYICEDQLNQQLKSQPDCISNIIQGELPKGKPCEMTTIDLMKPAMEKLDDRHYAIVFPQPTQVRLTCEREEYNTLNGSYLATIPHDCKLRTDDFTIINVNDHINGQPVKITKIPVQPDDVGQPYILKVNSVNLRKLHDIQYKIHQQETVRIEQPSTFYHTTIPFYGALSGALVLALIVLSRRLYLRRIKENSKTEIELTQAAPTYAVPDSSQNQRKLPTTFFPNLQE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -