Esub013351.1
Basic Information
- Insect
- Eupithecia subfuscata
- Gene Symbol
- -
- Assembly
- GCA_963564075.1
- Location
- OY751105.1:12555152-12559274[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4e-05 0.052 14.1 0.0 20 40 2 22 1 26 0.87 2 2 3.2e-13 4.2e-10 40.0 0.0 2 40 100 138 99 143 0.93
Sequence Information
- Coding Sequence
- ATGCGTACCGCCTCAGTCCAGTTCGGAATCCCTAGAACTACTCTCGGACGCTATTTAGAAACTGGCAGAACATGCGAAAAATTAGGAAAGCGCCCAATTTTCTCTGAAGTACAGGAGAGAGTGCTTGTTATCCGCCTTGAAGAATATTTAGAGAAAGGAAATCGTCTTAACTCAAAAATTGTCCGCCAAGAAGCATTCCGCTTAGCTGAAGAACTGGATATCCGTGCCTCGTTCAACAAGAAAAAGGAAGTCGCTGAAATAGTACTCAAGATAAAACGTCAAAGACATATATGGCCGGAAGAGAGTTTAGCACCGGCAGCGCGCGCCGTCCAAAGCGAAGGAATTTCCACGCGCACGGCCGCAGTCATCTTTGGAGTACCTAGAACTACTCTCCGACGCTTTTTAGAAACTGGCAAAGCATGCAACAGGTTAGGAAAACGACCAATTTTCACTGAAGTGCAAGAGAGAGTGCTCGTTATCCGCCTTCAAGAACATATACAGAAAGGAAAACCTCTTAACTCCAAAATTGTCCGGCAAGAAGCATTCCGCTTAGCTGAAGAACTGGAAATCCCTGCCCCATTcaacaagaaaaagaaaatcgcTGATGAGGGTATCCTTATACCGACCCGAATAGGAAAAAAACAGCTTCTGATGTTGAACAAATACACATATTTCCAACAAGGCTCGTCTGTGAGTTGGTATTGTTCTTCCAAGTCCAAGTTGTGTCCAGCCCGGATCCGAAGGTACCCGGACGGGAAGGTCCAGCAAATCAAGGTCGACCACAATCATCAACCCCCTAACTATGTCTACTCCAATGGAAAGTATATCAAAATTTGA
- Protein Sequence
- MRTASVQFGIPRTTLGRYLETGRTCEKLGKRPIFSEVQERVLVIRLEEYLEKGNRLNSKIVRQEAFRLAEELDIRASFNKKKEVAEIVLKIKRQRHIWPEESLAPAARAVQSEGISTRTAAVIFGVPRTTLRRFLETGKACNRLGKRPIFTEVQERVLVIRLQEHIQKGKPLNSKIVRQEAFRLAEELEIPAPFNKKKKIADEGILIPTRIGKKQLLMLNKYTYFQQGSSVSWYCSSKSKLCPARIRRYPDGKVQQIKVDHNHQPPNYVYSNGKYIKI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -