Basic Information

Gene Symbol
grh_1
Assembly
GCA_963564075.1
Location
OY751098.1:9293951-9332950[+]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.6e-56 5e-52 177.2 0.4 29 221 470 688 457 690 0.93

Sequence Information

Coding Sequence
ATGCGTGTAGTGGTGCCGCACCCTGCACTTTCCCTCGCGCGCACCTGCCGGTCTGCCcggcctccgccgccgccgccgccgccgccgccgccgccgccgggtgACCGAGCATGTGCTACGCTGCAAATAATGGCAAGAACACATGACCAGGAACAGGAATCAGGTAGAACTACGATCCGGTCAAACCCGTCCGACGCGTGCTtccaacattttttatttatttgtctgcATCGTCGGATACCGCTGGGCGTGACGTCAGACGACCTAAACTGGTTAGTGAGGGAGCAGGGATTTGCCTCGTATCCTTCCGGTTCTGCAAGTGGTTTGGACCTGTTCTATACCAGATCGTACGGCACCAGGCAAACCAGTGCTCGTGACGTACGGGTGCAGCGGGCTAGCCCGAAACCTCTATGCCGAACACTAGCATTGCAAAGCCTGTTCGGGAGGCGTAAGGAGGTGATGGAGGTGAGCGGAGAGTCATGGCGCTACTACGGTGGCGGGGCGGAGCACCCGCTGAGCGGTGGCACCACGGTGCTGGGCATGGCCGACGAGCAGTCCGGAGCCCTGGTCACCGAGTACTACAAGCTGCCCCCGCTAGGACAGGATGGACATCTAGCGCAACATAAAGATGCTAAGCTCGTTGACGTCTGGCCGGCCGGCGGCGCGCTGAAGGTGGTGACCAATGGCGCGCACGGGGCGGAGCTGGGCGAGCTGTCGGGCCTGTTCCACGCGGGGCTCGTGAAGCGCGAGCCCGAGGACCTGAGCCGCAAGGTGGTCGACGAGCCCGAGCCGCACGCGCTcaagccgccgccgccacgacACAAGGTGGCGGTCGGCGAGCCCGGCGAAGCGGCTTCGCCTTCCCCGGTGCCGTCGCGGGCCTCCTCAGCCGGCTCCCTGCTGCCGGACGCGGCCATGTACGCCGCTCAGATGTTCGCGCCGCCAGGCACCCCTAGCCCTACGCCTTACGGGGACCAGTACTCGCGCCAGCCCGCGACCTTTGCCAACGAGCCTTACTACAGAGAGTACTTTGTCGGCGATGGCTACCAACAGAGGGCTGCACCTCCCTACGACGGAGAGCCAGCCTCGGCCTCAAATTTCAGCGATCGATACGCTACTCCTCGCTACCACAGCAAGAGCGTGATCGCGGCCGCTGGGCTCACCGTGGACCTACCCTCACCCGACAGTGGGATCGGAGCAGACGCTGTCACTCCTCGAGATCACACCACTGTTCAGCAGTCGTTTGACTACACGGTGATCTGTCAGCAACCCGGCGTGGTTGAGGATGGCCGGGGGACGCCGTCGCACCACTCACCGTCGCAGGCACCGCGGACCCGGCCCTGGCACGACTTTGGACGGCAAAACGATGCTGACAAGATTCAGATCGCAAAACTGTTTTCCCCGTACGGGTTCAAGTACCACCTGGAGACGGCGAGCAGCAGCTCACAGCGGCGCGAGGACGACCGCATCACCTACATCAACAAGGGCCAGTTCTACGGCATCACACTGGAGTACGTGCCTGATCCTGACAAGCCGCTCAAGAACCAGACCGTCAAGagtGTAGTAATGTTAATGTTCCGAGAAGAAAAATCACCTGAGGACGAAATCAAAGCGTGGCAGTTTTGGCACGGAAGACAACACTCCGTCAAGCAAAGGATTCTTGACGCTGATGACGTATTGTCCGTTGATATCTTAATCGAAATCTCCGACGGCATAACTGCACTCGAAGACAAGATTAATGACAATTTGTGTTTGATTGCAGACACGAAGAACAGCATCGGACTTGCGGGCTCCATCGAGGAGATCTCGCACAACGCCATCGCTGTTTACTGGAACCCACTCGAGAGCGCAGCTAAGATTAATATTGCGGTTCAGTGCCTCAGTACAGACTTCAGCAGCCAAAAAGGAGTAAAGGGTTTACCACTTCAcatacaaattgataccttcgAAGATCCTCGAGATACGCAAGTCTACCACCGGGGCTACTGCCAAATCAAAGTGTTCTGCGATAAGGGCGCTGAAAGGAAAACAAGGGACGAAGAAAGAAGAGCTGCCAAAAGAAAAATGTCGGCAACAAATAGAAAGAAGTTGGATGAGATTTACCATCCTGTGACGGAGAGAAGTGAATTTTACACTATGGCTGATTTGGCGAAGCCACCCGTGTTGTTCAGTCCTGCGGAGGACATCGACAAACTAGCCGGCATGGACATCCAAGGGTTCTACGGACACGAAGACTCTTCTCTAACGGATGCCCATCTAAAGGGCGCGTCTCCTTTCCTCCTGCACACTGCGAAGCCGCAAGCTCCTGCCCTCAAGTTCCACAATCACTTCCCTCCAGATGCACCTGCATACAGAGACGTAGGCGGCCTATCCCCTTACAGCGACCGCAAAGACTCCCTAGAACTGGAAGGCGTGCTGGGCAAGCGCGCCCGCACGGCCACGCCGCCGCTCAGCGAGCGCGTCATGCTGTACGTGCGGCAGGACGCAGAGGACGTGTACACGGCGCTGCACGTCGTGCCGCCGACCACACAGGGCTTGCTGCACGCCATTGAGAATAAGTACAAAATTTCTGGTTCGGCAATTAATAATCTTTATCGAAAGAACAAGAAAGGGATTACGGCCAAAATTGACGATGAAATGTTAGCGTACTATTGCAATGAGGACCTCTTCTTGCTTGAGGTGCGGCCTGCCGGGGACAACGGTGAAGAGCGTCTCTACGATATCACCTTCGTGGAGCTCCCCCTGGAGCACTAG
Protein Sequence
MRVVVPHPALSLARTCRSARPPPPPPPPPPPPPGDRACATLQIMARTHDQEQESGRTTIRSNPSDACFQHFLFICLHRRIPLGVTSDDLNWLVREQGFASYPSGSASGLDLFYTRSYGTRQTSARDVRVQRASPKPLCRTLALQSLFGRRKEVMEVSGESWRYYGGGAEHPLSGGTTVLGMADEQSGALVTEYYKLPPLGQDGHLAQHKDAKLVDVWPAGGALKVVTNGAHGAELGELSGLFHAGLVKREPEDLSRKVVDEPEPHALKPPPPRHKVAVGEPGEAASPSPVPSRASSAGSLLPDAAMYAAQMFAPPGTPSPTPYGDQYSRQPATFANEPYYREYFVGDGYQQRAAPPYDGEPASASNFSDRYATPRYHSKSVIAAAGLTVDLPSPDSGIGADAVTPRDHTTVQQSFDYTVICQQPGVVEDGRGTPSHHSPSQAPRTRPWHDFGRQNDADKIQIAKLFSPYGFKYHLETASSSSQRREDDRITYINKGQFYGITLEYVPDPDKPLKNQTVKSVVMLMFREEKSPEDEIKAWQFWHGRQHSVKQRILDADDVLSVDILIEISDGITALEDKINDNLCLIADTKNSIGLAGSIEEISHNAIAVYWNPLESAAKINIAVQCLSTDFSSQKGVKGLPLHIQIDTFEDPRDTQVYHRGYCQIKVFCDKGAERKTRDEERRAAKRKMSATNRKKLDEIYHPVTERSEFYTMADLAKPPVLFSPAEDIDKLAGMDIQGFYGHEDSSLTDAHLKGASPFLLHTAKPQAPALKFHNHFPPDAPAYRDVGGLSPYSDRKDSLELEGVLGKRARTATPPLSERVMLYVRQDAEDVYTALHVVPPTTQGLLHAIENKYKISGSAINNLYRKNKKGITAKIDDEMLAYYCNEDLFLLEVRPAGDNGEERLYDITFVELPLEH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00701724;
90% Identity
iTF_00701724;
80% Identity
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