Basic Information

Gene Symbol
XBP1
Assembly
GCA_963564075.1
Location
OY751100.1:3179595-3183110[+]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 2 2.6e+03 -0.6 0.0 14 25 22 33 22 35 0.84
2 3 4.3e-18 5.4e-15 56.0 12.8 2 63 38 99 38 101 0.93
3 3 0.17 2.2e+02 2.8 0.1 35 51 92 108 91 114 0.63

Sequence Information

Coding Sequence
ATGAGTGGTCCAATCATCATTACCGTGCCCAACAGCTATTTGATGGAGGAGGAAGCTGTAGACGTGGCTCCGGCTCCGTCCCGGAAACGGAGATTGGACCATTTGTCCTGGGAAGAGAAGATGCAGAGAAAAAAGATGAAGAACCGCGTGGCAGCCCAAACCTCCCGCGACCGAAAAAAAGCCAAGATGGACGAGATGGAGTTCCGCATCGAGAAGTTAGAAGAACGGAACGATAAGCTGATGAACGAGGTGGAGAGCTTGCGAGCGCTGAACGAGCGTCTCATGAGCGAGAATGATAAGCTACGAGCGGCGAGCGCACGGATCGCCGGCGAGACCCAAGGACCAGCAGAGTCCCCTCAGCAGAAGGACGGGTCCTCGCCGGCGATTCGCGCGGCTCGCTTGCTCGCGGCGATGATTCTCCTCTCGCAGACCTCCTCGCGCACCTCGACTCCCCCGAATACCTCGATACGCTGCATCAGCTCGCAGACGAACTGCTCCAGGAGTTTGATGCTTCAGCTGCAGGAAAGACTCAAGCTGAGCAAATCAGCGAAGCTGGAGAACGCCCTGAAGGACCTGAAGTGGTGGGGACCCCAACAGAGTACCTGGAACCCAGTGAAAGTAGCGTCCTAG
Protein Sequence
MSGPIIITVPNSYLMEEEAVDVAPAPSRKRRLDHLSWEEKMQRKKMKNRVAAQTSRDRKKAKMDEMEFRIEKLEERNDKLMNEVESLRALNERLMSENDKLRAASARIAGETQGPAESPQQKDGSSPAIRAARLLAAMILLSQTSSRTSTPPNTSIRCISSQTNCSRSLMLQLQERLKLSKSAKLENALKDLKWWGPQQSTWNPVKVAS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00699839;
90% Identity
iTF_00696245;
80% Identity
-