Basic Information

Insect: Eupithecia pulchellata
Gene Symbol: -
Assembly: GCA_963931895.1
Location: OZ007549.1:427665-439830[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.005 0.36 12.0 2.1 1 23 366 388 366 388 0.96

2 9 0.03 2.1 9.5 1.4 2 23 396 418 395 418 0.94

3 9 0.0044 0.31 12.2 2.0 1 23 449 472 449 472 0.96

4 9 0.25 18 6.6 1.8 2 23 512 534 512 534 0.96

5 9 0.031 2.2 9.5 1.2 1 21 542 562 542 566 0.92

6 9 0.044 3.2 9.0 5.5 1 23 641 663 641 663 0.95

7 9 2.9e-05 0.0021 19.0 1.1 1 23 669 691 669 691 0.97

8 9 0.00012 0.0084 17.1 1.3 1 23 696 718 696 718 0.98

9 9 0.0081 0.58 11.3 1.9 1 23 724 747 724 747 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.005	0.36	12.0	2.1	1	23	366	388	366	388	0.96
2	9	0.03	2.1	9.5	1.4	2	23	396	418	395	418	0.94
3	9	0.0044	0.31	12.2	2.0	1	23	449	472	449	472	0.96
4	9	0.25	18	6.6	1.8	2	23	512	534	512	534	0.96
5	9	0.031	2.2	9.5	1.2	1	21	542	562	542	566	0.92
6	9	0.044	3.2	9.0	5.5	1	23	641	663	641	663	0.95
7	9	2.9e-05	0.0021	19.0	1.1	1	23	669	691	669	691	0.97
8	9	0.00012	0.0084	17.1	1.3	1	23	696	718	696	718	0.98
9	9	0.0081	0.58	11.3	1.9	1	23	724	747	724	747	0.95

Sequence Information

Coding Sequence: ATGCTAAAAACAGTTTGCCGTATCTGCCTCAGGACTGATGTTGACGTGAGAGACATAGATGAAAGCCTCGTCGATTTACACGACGAAATATGTGATTATGATGTTTACAAGAGCAAACATCTGAAATACTGCGGTGTTTGTGAACATCTACTGAGGAAGTACCACAACTTCAGGGTCCGATGCGGCCGAGCACACAAGCTGCTCAGCACCTGGCGTCACAATCTTCAAgatattCCAGATAATCTCCACAAACAATTACCGTCGTCTCTTTCAGTCTGCCACAGCGAAGCTAGACACAAGGTCTACGAGATACGACACGATCTTGACCCTAACCTTATCCCAGACGTCGAGTTCAATAAATATGACCTCTCTGCTACATTAGAAACCCTCCCCGACCTTGAAGGTcaaataaaaacagagacaGACGATAAAGGCAGTTGTATATTTCTTACAAAAGAGAATGATTTCCCCGAAGAAATAAGGTTTGATTTGGAACTGCAAAAGAATGAGCTACTGGACACGTTAGAGCTACAAAACGATGACATCAGCGCCCTAGAAGATGACATACCTCTCAGTAATTTCAAAGAAGAGAATATAGATTACAGTGATAATGAAGAGTACAAAACTAAACCTAAACGATCGCAAATCACAAAAGCAAAGAGTAAAAAGAAAACAGAAGTAAAATACGAAGATTTAGATGATATAGTTCTAGCAGATTTAGAGAAATACGGCTCTGATGATAAAATGATTAAAGCGAGACAGAAGTTCCTTAAGAATAAGGCGCGATTAAAAGATAGAATATTGGAGGTACTTGACACGGGTCAGTTTAATGATCTGGGAGATAATGTTAAGATGagcaaagatatatttattaagaTATTCAATAGATATGATAAATGTGATATGAGGATGCTGTCTCTGAAGCCAGATTCCCCCGAGCTGAGAGAGAAGCTCCGCCGCTTCCTGCTCTACCTGCTGAGGAAATACAACCCGGAGTACGAGACCGTCTTCCACATCGAGTACCTGGACACCGATGATAAGAAACTGCAGGAGTTCAACCGTCGCAAAGACAGCGCCGCGTACTTGGAGGCCCCTTTCAAATGTGAGCTCTGCTACAAAGGCTTCGACGCGCAGAGTCATCTCGAGTACCACAACAAGTGGCACAAGCCAACGCCCGGTGACATAGTCTGCAACATATGCCCGATGCGGTTCGTCTCGAAGGCCACCTGTAAAGCTCATCGCAAGAACAACCACACGGTCGTCTACTCATGCAGGCAGTGTCCCGTCATCACTTACCATTTTTCCGTCATGATAAACCACTACCACCAGCACAAAGGCGTGGAGTACCACTGTCCCACATGCCTCAGCGTTTACACCAACAAGACCACACTCAACAACCACCGCCGCGAGGCGCACGCGACGGCGCACATCTGCACCGCCTGCGCGCGCAGCTTCGTCTCGGAGAAGGGACTCTTCTTCCACCGAAAGTACAAGCACAAGGACGATGCAGTGGCCAACCCGGCGGAGGCGGCGACCTGTCTCCAGTGTAACATCACATTCGACTCGCACAAGGTTTACTTGAAGCACGAACGCAGTGCGCACACGCGCAGGCCTGAGACTGTATACAAGTGCTATTTCTGCAAGGAAGGCTTCGACAGCATCGAGGCGCTGCGCAAACACAAACTAGAGTTCAACCACCAGAGGGCGCCCAAACAACTTATACACAGGACATCTATCTCCGCTAAGCAAGGCATCCGGCGCACGCGCCGCACACGGGTCAGCGACCCCGACAAGCCCTATAGGAAGTGTCCTGTCTGTCTACTAGAGATCCCTAACACGTTCCCGACGAGTCTATACATGCACTACCAGGAGGCGCACCCAGACGTGCCCTACCACTCCGTGTACACAGACTCGAAGGACTATCTCTGCGAGCAGTGCGGGAAGACTTTCCGGGTGTACTGCCACTACCTGGACCACAAGAACCAGCACGCGGGCATCAAGCCGTACACCTGCAAGGAGTGCGGCGCCGCGTTCTCAACACGCAAGCACCTCGCGTACCACGCCGAGCGGCACCGCCCGCCGCGCTACCAGTGCAAGCATTGCGGGAAGCTGTTCCTAAGCGCTGCTAATCTGTTCGCGCATCGGCGGGGTCACATAGGCGACCGTCGTTTCAAGTGCGACATATGCTTCAAAGGATTCCTTCACTCGTACACTTTGAAGGAACACGTCAAGGGTGTCCACAACCAGATACGGAGGGTTCGGAAGGGACCGCCGCCGCAAATAGagaaaaatattctttga
Protein Sequence: MLKTVCRICLRTDVDVRDIDESLVDLHDEICDYDVYKSKHLKYCGVCEHLLRKYHNFRVRCGRAHKLLSTWRHNLQDIPDNLHKQLPSSLSVCHSEARHKVYEIRHDLDPNLIPDVEFNKYDLSATLETLPDLEGQIKTETDDKGSCIFLTKENDFPEEIRFDLELQKNELLDTLELQNDDISALEDDIPLSNFKEENIDYSDNEEYKTKPKRSQITKAKSKKKTEVKYEDLDDIVLADLEKYGSDDKMIKARQKFLKNKARLKDRILEVLDTGQFNDLGDNVKMSKDIFIKIFNRYDKCDMRMLSLKPDSPELREKLRRFLLYLLRKYNPEYETVFHIEYLDTDDKKLQEFNRRKDSAAYLEAPFKCELCYKGFDAQSHLEYHNKWHKPTPGDIVCNICPMRFVSKATCKAHRKNNHTVVYSCRQCPVITYHFSVMINHYHQHKGVEYHCPTCLSVYTNKTTLNNHRREAHATAHICTACARSFVSEKGLFFHRKYKHKDDAVANPAEAATCLQCNITFDSHKVYLKHERSAHTRRPETVYKCYFCKEGFDSIEALRKHKLEFNHQRAPKQLIHRTSISAKQGIRRTRRTRVSDPDKPYRKCPVCLLEIPNTFPTSLYMHYQEAHPDVPYHSVYTDSKDYLCEQCGKTFRVYCHYLDHKNQHAGIKPYTCKECGAAFSTRKHLAYHAERHRPPRYQCKHCGKLFLSAANLFAHRRGHIGDRRFKCDICFKGFLHSYTLKEHVKGVHNQIRRVRKGPPPQIEKNIL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00699734;
90% Identity: iTF_00706575;
80% Identity: -