Epul004536.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Eupithecia pulchellata
Gene Symbol
ZBTB41
Assembly
GCA_963931895.1
Location
OZ007522.1:13192438-13193874[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 10 0.00041 0.029 15.4 3.5 2 23 158 180 157 180 0.95
2 10 0.02 1.4 10.1 1.2 2 21 186 205 185 206 0.94
3 10 7.4 5.3e+02 2.0 1.4 1 12 228 239 228 241 0.84
4 10 5.8e-05 0.0041 18.1 1.1 1 23 256 279 256 279 0.94
5 10 0.015 1.1 10.5 6.5 2 23 287 308 287 308 0.97
6 10 0.00036 0.026 15.6 0.9 1 23 316 338 316 338 0.98
7 10 0.0037 0.26 12.4 0.3 1 23 344 367 344 367 0.92
8 10 0.19 13 7.0 4.5 1 23 373 395 373 395 0.96
9 10 4e-05 0.0029 18.6 0.3 3 23 402 422 400 422 0.98
10 10 4.8e-05 0.0034 18.3 6.4 1 23 427 450 427 450 0.98

Sequence Information

Coding Sequence
ATGGGAGAGGACAAGAAAAGTACTGCCATTTGCAGAGTTTGTTTGAGTTACGATTTTGAAAAGGAAGATGCCAAAGAGCTGTCGCTGTTTGAGGAATACAATGGTTATGTTATCTCAGACAAAATTAATGCTCTTACTAATATCGGCATCAAAGAAGGCGATGGTTTGCCCGATAGGATATGTCCAGAGTGCCTCCTTGAGCTCGAGAATGCCTTCAAGTTTAAACTGAAGTGTGAAAGAACCAATGAAGTTCTACTCTCTGCCGTGAACGAGGCTCCTACCTTAGAAGGCAATGAAGATGACCTGGTTCTCAATTTAAAAAAGGAATACCTTGACGATGCTGATATTGAATACGAAGAACTGGATGACAATCTTACTCCTGACTTAGAGGACACTAGGTCTCGCTCTTCAGAAGCAGAACCGCCTGAGGCAGCTCCACCTAAACCCAGTAAAGCCATCGATTTGAAACTAATATGTCATGACTGTGGCGGATCTTTCAAGAGCAAGTGCAAGCTCAGGGTACACTGGAAGAAAGTACATTTGATGGAAAACATGAAATGTGAAAACTGCCTGAGAAGGTTCAAATCATTTGCAGCCTTAAATTCACACAAAAAGAAAAACTTGAAAAGCTGTCTGGTTGCCAGCAAAGTACGCATTGAAGGTGAGGGCAAGAACCGTATCTTCCACTGCAAGGAATGTGACTATCATAGTAAGAGAATCCACGTTGTGGGTTTCCACCTCACCATTCACTCCGGTGAGAAACCATTTCAGTGTGATGTCTGTCAGAAGTATTTTAGTCAACGTAGTTCTATGAATGCGCACAAAGAGaatgtacataaaatatataaaggtGGAGGAACATGTCAACACTGTGGGAAACATTTCCAAGGTCGTACAAAACTATACAATCATCTACGATTCCACAAAAACAGTGCTCCTGAAGGTTATCCCTGTAAAATTTGCAAAGCAGtgcttaaatataaaaatagtttggaTACCCATATGAAAAGACATTCTGGTGTGAAGGCCTACTCGTGTGAAATTTGTGGAGCATCTTTTTACAGTCCACCTGAACTTTGGTGCCATAGAGAGAAGGTTCACATTAAATCAAAAAAATTCACATGTGATATATGTAAGTATACAAATTTCTCCAAATATAGTATGAACCATCATATTTTGAAGCATACAGCTTCTAACTTTGGCTGCAATGTTTGTGGAATGATGTTTGAAAATGAATATCAACTGGAACTTCATCAGAAGAGGCATACCGAAAGGAACTATAGCTGTTGCCATTGTGGTAAAACTTACTACTCTAAAAAGAACCTGTCCGCACATGTTCGGAGCAAGCACAAGTTTGTTATGTTGAATGGAGGTACGGCTAGCATGAGACCAACAGCTGGCAAAAACAGTAAGGCTGACCACTCTGCTAAAAGTTAA
Protein Sequence
MGEDKKSTAICRVCLSYDFEKEDAKELSLFEEYNGYVISDKINALTNIGIKEGDGLPDRICPECLLELENAFKFKLKCERTNEVLLSAVNEAPTLEGNEDDLVLNLKKEYLDDADIEYEELDDNLTPDLEDTRSRSSEAEPPEAAPPKPSKAIDLKLICHDCGGSFKSKCKLRVHWKKVHLMENMKCENCLRRFKSFAALNSHKKKNLKSCLVASKVRIEGEGKNRIFHCKECDYHSKRIHVVGFHLTIHSGEKPFQCDVCQKYFSQRSSMNAHKENVHKIYKGGGTCQHCGKHFQGRTKLYNHLRFHKNSAPEGYPCKICKAVLKYKNSLDTHMKRHSGVKAYSCEICGASFYSPPELWCHREKVHIKSKKFTCDICKYTNFSKYSMNHHILKHTASNFGCNVCGMMFENEYQLELHQKRHTERNYSCCHCGKTYYSKKNLSAHVRSKHKFVMLNGGTASMRPTAGKNSKADHSAKS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00702382;
90% Identity
iTF_00702385;
80% Identity
-