Basic Information

Insect: Eupithecia pulchellata
Gene Symbol: -
Assembly: GCA_963931895.1
Location: OZ007550.1:3577281-3582963[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.0046 0.33 12.1 0.8 1 23 251 273 251 273 0.94

2 10 1.8 1.3e+02 3.9 0.0 3 23 298 319 297 319 0.93

3 10 0.0002 0.014 16.4 0.8 2 23 340 361 339 361 0.95

4 10 1.3 89 4.4 1.6 2 23 366 387 365 387 0.95

5 10 0.079 5.7 8.2 2.9 3 23 397 418 396 418 0.92

6 10 0.072 5.1 8.3 2.0 1 23 424 447 424 447 0.93

7 10 5.8e-05 0.0041 18.1 0.9 1 23 453 476 453 476 0.97

8 10 0.00011 0.0076 17.2 2.2 1 23 482 504 482 504 0.98

9 10 1.8e-06 0.00013 22.8 1.8 1 23 510 532 510 532 0.98

10 10 8.3e-06 0.00059 20.7 1.9 1 23 538 561 538 561 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.0046	0.33	12.1	0.8	1	23	251	273	251	273	0.94
2	10	1.8	1.3e+02	3.9	0.0	3	23	298	319	297	319	0.93
3	10	0.0002	0.014	16.4	0.8	2	23	340	361	339	361	0.95
4	10	1.3	89	4.4	1.6	2	23	366	387	365	387	0.95
5	10	0.079	5.7	8.2	2.9	3	23	397	418	396	418	0.92
6	10	0.072	5.1	8.3	2.0	1	23	424	447	424	447	0.93
7	10	5.8e-05	0.0041	18.1	0.9	1	23	453	476	453	476	0.97
8	10	0.00011	0.0076	17.2	2.2	1	23	482	504	482	504	0.98
9	10	1.8e-06	0.00013	22.8	1.8	1	23	510	532	510	532	0.98
10	10	8.3e-06	0.00059	20.7	1.9	1	23	538	561	538	561	0.98

Sequence Information

Coding Sequence: ATGAGCCTTGCTAAGAACAAGGGTCCTATTATCGAGCAAGCTCTCTGCAGATGCTGTGGATCTATAAAAAGATGTCGAATCCTGAACGTGGAATACGAATGGCAAGGGCAGAAAGAGGTGTATTCAGATATGTTTATGGATTGTTTCGGCCTTCTGCTCTCCCATCTTGAGGGTGAGGATACAGAGCGAGTGATATGTGCCACATGTGTGACCAGGTTGAGAGATGCTGTTGCATTCAAAAGCCAGGTACTGCAGTGTGAAAACACTTTACTGAAGACCAGTATCCACATCCATGGtacagATATCAACCGAATAGATATAAAAACAGAAGTAAAACAAGAAACTGAGCTGCCCTTTGACCCAAAACTGCTAGACATGATGCTGGACAAGAAAGAAGAAGACAACGGACAGAGTGACCACGAAGACATGGACTGTGATGATAATGtttcagACAACGAACCTATAATCAACGTGAAGCTAAAGTCTCGCAAGAAAAAGTTACCGAAAAATAAACTCGCGAAAGAGAAAAAAGTGAAGCGAGAGCGAGACAAAGTattaaagaagaagaagattgGAGAAGTTGAGAAGATCGTAGAAGAGAATATTGAGAGCAGGATAAACGAACCACCACCGACCCAGCCAAACCAAACCCGCCCAAGAATAGTTGAAAACGAAATGAAAGCGATCCACAACACTATAACTATAGTAGAAAACTCATACGTCTGTCCATTCTATACTTCCTTCAGCGATTACTACTGTATATACTGTCGGGAGACATTCACCGATCCAACAAAACTCAGAGAACATACTTTAGAACATGACCCGACCAGCTTCAAAGATATTCTATTCACCAGCAAGAAGCTGGCTCAAGTAGATATTATAAGAGTTGATTGCAGACTCTGCCCGCAAGGAATCAACGATATAGACTCTTTGAAAGAACATCTGATCAACGTTCATGGAAAAAGTTTACACTCGATAACAAACGAGTTCCTGAAGTTCAAGTTGACAGCTAATCTATCTTGCACAGAGTGTGGTGTTCCGTTCAAGTTCTTCCATGCGTTGAAAAAACATATGGCGGAACATTTTGGTACTTGCATATGCGATGTATGCGGTGCGCATTATTTCGATGAGAGAATACTGTTGATACATCAGAAAAAGCATCAGGAAGCTAAAGCAGAGATGCATGGATGTAGTTTCTGTGATAGGACATTCAAATCTAGGCATAACAGGTATTTACATGAAGCTAAACTTCATAAGAAAGAAGCCGCGTACCCTTGCAGCAAATGCGATGAAATATTCTTCACGCATACCCTTAGGTATCGGCATCTGATAGAAACGCATGGCGAGGAACGGACTTATCCGTGTGATTTGTGCGGCCGGACTTATGACTCTAGGAAATCCCTGCGGGAACACAATAGGAGATCCcatcttaaaatcatgaagcaTCAATGCGATCTTTGTGATAGAAGATTCTATCTCCCTTCAAGGTTAAGGGAGCATATGTCGACTCATACTGGAGAAAGAAACTATAGATGTGAGTATTGTGGAAAGAGCTACCCGAGACTCAGAGGTTTGAAGGTACATATGCACTCTCATAACGCAGAGAAGAAGTTCCGTTGTGTTTTATGCAATAGTACGTTCACGCAGAATGCTAATTTGAGGAATCATATGAAGAGACAGCATCAGAGTTTGGATATGGAAGATGGTGATTATCAAAGTGGGATTATGATGGGTGTGAAATAG
Protein Sequence: MSLAKNKGPIIEQALCRCCGSIKRCRILNVEYEWQGQKEVYSDMFMDCFGLLLSHLEGEDTERVICATCVTRLRDAVAFKSQVLQCENTLLKTSIHIHGTDINRIDIKTEVKQETELPFDPKLLDMMLDKKEEDNGQSDHEDMDCDDNVSDNEPIINVKLKSRKKKLPKNKLAKEKKVKRERDKVLKKKKIGEVEKIVEENIESRINEPPPTQPNQTRPRIVENEMKAIHNTITIVENSYVCPFYTSFSDYYCIYCRETFTDPTKLREHTLEHDPTSFKDILFTSKKLAQVDIIRVDCRLCPQGINDIDSLKEHLINVHGKSLHSITNEFLKFKLTANLSCTECGVPFKFFHALKKHMAEHFGTCICDVCGAHYFDERILLIHQKKHQEAKAEMHGCSFCDRTFKSRHNRYLHEAKLHKKEAAYPCSKCDEIFFTHTLRYRHLIETHGEERTYPCDLCGRTYDSRKSLREHNRRSHLKIMKHQCDLCDRRFYLPSRLREHMSTHTGERNYRCEYCGKSYPRLRGLKVHMHSHNAEKKFRCVLCNSTFTQNANLRNHMKRQHQSLDMEDGDYQSGIMMGVK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00696759; iTF_00697730; iTF_00700451; iTF_00698625; iTF_00703346; iTF_00705404; iTF_00699552;
90% Identity: -
80% Identity: -