Basic Information

Gene Symbol
ZNF784
Assembly
GCA_963931895.1
Location
OZ007549.1:1770857-1787461[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 14 0.24 17 6.7 1.0 1 23 382 404 382 404 0.97
2 14 0.04 2.9 9.1 0.3 1 23 411 434 411 434 0.93
3 14 0.62 44 5.4 0.2 1 23 438 460 438 460 0.92
4 14 0.00075 0.053 14.6 1.2 1 23 465 488 465 488 0.98
5 14 0.00036 0.026 15.6 1.0 2 23 493 515 492 515 0.96
6 14 0.022 1.6 9.9 0.4 2 23 551 573 550 573 0.90
7 14 0.00036 0.026 15.6 1.0 2 23 609 631 608 631 0.96
8 14 0.00025 0.018 16.1 0.3 2 23 667 689 666 689 0.96
9 14 0.00025 0.018 16.1 0.3 2 23 725 747 724 747 0.96
10 14 0.053 3.8 8.8 0.1 2 23 834 856 833 856 0.96
11 14 0.026 1.8 9.8 0.1 3 20 873 890 872 893 0.92
12 14 2.1e-05 0.0015 19.5 0.7 1 23 899 921 899 921 0.97
13 14 0.0003 0.021 15.8 2.4 1 23 928 950 928 950 0.97
14 14 0.00015 0.01 16.8 3.0 1 23 956 979 956 979 0.93

Sequence Information

Coding Sequence
ATGCGTTGCAGTGTTCAAAACTGCAGCAATGAGCCAAAACCAAAAAGCAAAGCCGATGGAATTACTTATCATTTGTTCCCTAAAGACCCAACTCAGAGATCAGCGTGGATAGAAGCATTAGGCACGCCTGACTATGCACCAAATGAACGAAGTGTTATCTGTTCTGAACACTTCAGGAATGAAGATCTGTATGTGACTAAATCGGGTATGCAGAAGGTTAAAAATGGAGCGCTGCCTGTGGTTGTTTTtgTCTCTTCAGAGGACCTAAACGCGCCATCTGCACTACGGGTCTGCAGGATATGCTTGGCGATGGACTCAAGGTTGCTTGACATCCGGGAGCAAAACCTGGAGCAGTTCTATCTTCAGATCACTGGGATATttGTGAATAACGATAGACTTCCTCAGCGGTTGTGCTGGGAATGCGCAGCGCGATTGCGCGCAGCCGCCGCGCTTCGAGAGAAAGCGACGCGTGTCAACTCTCTTCTACATAGTCTCACCTCACATGCTTATatTACGGTAAAAGATATAAAATCGATCGACAGAACAAAGAACCAGCTAACATCTAGTCTCATCCGAAAAATATACGAGAACGACGATTCAGATCTACACGTAAAAGAAAACGAAATCATCAAATCAGAAACGAATAACGGTTTTATCGATGACGATAACGGATTTGACAATAATACGGGTTTTGACAACGATACCAGTTTTAATACCGACAACGTCGATAACGGTTTCGATGAAAAAGTTTCAgaagtaaaaataacaaaaataaaggaTGAAAATGAAATATTTGTGAATGAGTTTGATGATTTCGAATCCGATGATGAAAAGACTCTGAGTACGCTCTCAAATCAAGTGTATGTTGATGATTTGAAGAAAGAAAAGGTGAAAGTAAAGAAGAAGAGAAAAGTGAAGAAGGTTAAAGAGATAGGTGAAAAAGTGAAGAAGAGTGAAAATACAAAGAAGAAAGATGTCAATGAAGATCCTGAGATTACTATGGATAAgtaTAAGACATCGGATGTAAAACGTCGCAACGATGGTTTAGACGAAACCCTCTTTACCATAACAACACCGACTTACGAAGATCAAATCGCTGAGGTTGAAAAACGCCAGGAATCGACGTCATACAAAAACGCCCTGTTCAAATGCACGACGTGCTATCGCGGGTTCCAAATACGGGACCGCTATGAAGCACATATAGTGCGACACAGTGAGAAATGCGGCATGTACGAGTGCTTTATCTGCAAAACTCGTCTAAAAGCTGCGCGCGCGCTTCGCAAACACATCACGGCGCAACACACCGAACAATTCAGCTGTAAAGGATGTCCGTTTGTCACTAGAAACAGAGGCGTCGCTAGGGAGCATGAGAAATGGCACGCCGGTACCAAGTACCAATGTCCACACTGCGATATGGAGTTCGACAAGCTAACAACATACATGGGCCATATCCGGATAAAGCATGCGTCGGACTGGGTGTGTCCACACTGTGGGTACACGTTCGTGAGTCGCAAGGGCGTGCTAGTACACAAGCGGAAGAAACACCGACTCATTGATGACAATGTAAGTGAACGGTTATTGAGTTGTAGAGAGCAAAGCGAAGGTAACAACATACATGGGTCATTACGGATAAAGCATGCGTCGGACTGGGTGTGTCCTCACTGTGGGTATCCGTTCGTGAGTCGCAAGGGCGTGCCTGTACACAAGCGGAAGACACATCGACTCATTGATGACAATGTAAGTGAACGGTTATTGAGTTGTAGAGAGCAAAGCGAAGGTAACAACATACATGGGTCATTACGGATAAAGCATGCGTCGGACTGGGTGTGTCCTCACTGTGGGTATACGTTCGTGAGTCGCAAGGGCGTGCTAGTACACAAGCGGAAGAAACATCGACTCATTGATGACAATGTAAGTGAACGGTTATTGAGTTGTAGAGAGCAAAGCGAAGGTAACAACATACATGGGTCATTACGGATAAAGCATGCGTCGGACTGGGTGTGTCCTTACTGTGGGTACACGTTCGTGAGTCGCAAGGGCGTGCTAGTACACAAGCGGAAGAAACATCGACTCATTGATGACAATGTAAGTGAACGGTTATTGAGTTGTAGAGAGCGAAGCGAAGGTAACAACATACATGGGTCATTACGGATAAAGCATGCGTCGGACTGGGTGTGTCCTTACTGTGGGTACACGTTCGTGAGTCGCAAGGGCGTGCTAGTGCACAAGCGGAAGAAACATCGACTCATTGATGACAATacgcCGCTAGAGGGCCCCACGTGTGCAGTGTGTGAGGTCCAATTCGCAAATGAGGAGGCCCACGCGAGACACCTCAAACTATCCTCCCGGCATATGAAGGAGAGTGATCCGAATCGTCTCCGCAACGATTCTCAGAGTATGAACGCGGAGCGCTGTGGCCGCGTGATGCGCCGCATCGAGCGACGGCCGGTCATACACGGCCGGAGCGATGGCGCGGCGGACGTCGCTAGGCCGCACGTCACCTGCGAACAGTGCGGGTTAGTGCTACGCGATTTGAGACTCTACGCGCAACACTTCCGACGCGCGCACCCCGACAAGAATCGAACCAAGTACCCCGCCATGAAGACACCCGCTATGTGCGAACTGTGCGGGCGGATATTCCAGAGCATGGCCCTCCTAAAAGACCACATGTGGGTCCACACCGGTGAGAAGCGGTTCAAATGCGCCGGCTGCCCGAAGAGCTTCACACAGAAGAGTAATCTGGTGTTCCACGAGCGGGTGCACAGTGAACCACGGCCGTCGTTTCCTTGCCCGCTGTGCGGAAAGCATTTcgccttttataataataggagGCGGCATATGTTTATACACACCGGCCTCAAACCATTCAAGTGCAACACGTGCGGGAAATGCTTCACGACGGCGGGCGAGCAACGCGCGCATCTAGACCATGTTCATATGAAGAAACCTTGGCCTAAGCGCGCTAGGAAGGACTATGAGAAATGTCACACCGAACCTTAG
Protein Sequence
MRCSVQNCSNEPKPKSKADGITYHLFPKDPTQRSAWIEALGTPDYAPNERSVICSEHFRNEDLYVTKSGMQKVKNGALPVVVFVSSEDLNAPSALRVCRICLAMDSRLLDIREQNLEQFYLQITGIFVNNDRLPQRLCWECAARLRAAAALREKATRVNSLLHSLTSHAYITVKDIKSIDRTKNQLTSSLIRKIYENDDSDLHVKENEIIKSETNNGFIDDDNGFDNNTGFDNDTSFNTDNVDNGFDEKVSEVKITKIKDENEIFVNEFDDFESDDEKTLSTLSNQVYVDDLKKEKVKVKKKRKVKKVKEIGEKVKKSENTKKKDVNEDPEITMDKYKTSDVKRRNDGLDETLFTITTPTYEDQIAEVEKRQESTSYKNALFKCTTCYRGFQIRDRYEAHIVRHSEKCGMYECFICKTRLKAARALRKHITAQHTEQFSCKGCPFVTRNRGVAREHEKWHAGTKYQCPHCDMEFDKLTTYMGHIRIKHASDWVCPHCGYTFVSRKGVLVHKRKKHRLIDDNVSERLLSCREQSEGNNIHGSLRIKHASDWVCPHCGYPFVSRKGVPVHKRKTHRLIDDNVSERLLSCREQSEGNNIHGSLRIKHASDWVCPHCGYTFVSRKGVLVHKRKKHRLIDDNVSERLLSCREQSEGNNIHGSLRIKHASDWVCPYCGYTFVSRKGVLVHKRKKHRLIDDNVSERLLSCRERSEGNNIHGSLRIKHASDWVCPYCGYTFVSRKGVLVHKRKKHRLIDDNTPLEGPTCAVCEVQFANEEAHARHLKLSSRHMKESDPNRLRNDSQSMNAERCGRVMRRIERRPVIHGRSDGAADVARPHVTCEQCGLVLRDLRLYAQHFRRAHPDKNRTKYPAMKTPAMCELCGRIFQSMALLKDHMWVHTGEKRFKCAGCPKSFTQKSNLVFHERVHSEPRPSFPCPLCGKHFAFYNNRRRHMFIHTGLKPFKCNTCGKCFTTAGEQRAHLDHVHMKKPWPKRARKDYEKCHTEP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00702053;
90% Identity
iTF_00702053;
80% Identity
iTF_00702053;