Epul024306.1
Basic Information
- Insect
- Eupithecia pulchellata
- Gene Symbol
- -
- Assembly
- GCA_963931895.1
- Location
- OZ007550.1:3705500-3722293[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 35 0.89 63 4.9 0.5 1 23 365 388 365 388 0.93 2 35 5.8 4.1e+02 2.3 0.4 3 23 416 437 414 437 0.88 3 35 0.00084 0.06 14.4 3.4 1 23 459 481 459 481 0.98 4 35 0.00033 0.024 15.7 0.1 1 23 485 507 485 507 0.96 5 35 0.11 7.9 7.7 3.2 1 22 512 533 512 535 0.83 6 35 0.18 13 7.1 1.0 2 23 543 565 542 565 0.91 7 35 0.00089 0.063 14.3 2.9 3 23 574 595 572 595 0.95 8 35 7.5e-05 0.0054 17.7 1.8 1 23 601 623 601 623 0.99 9 35 1.8e-05 0.0013 19.6 3.5 1 23 629 651 629 651 0.98 10 35 0.005 0.35 12.0 0.4 2 23 659 681 658 681 0.96 11 35 6.2 4.4e+02 2.3 1.1 3 23 740 761 738 761 0.91 12 35 0.023 1.6 9.9 4.0 2 23 833 854 832 854 0.96 13 35 0.0022 0.15 13.1 0.1 1 23 858 881 858 881 0.96 14 35 0.016 1.1 10.4 0.4 1 23 913 936 913 936 0.93 15 35 8.2e-06 0.00058 20.7 2.0 2 23 944 966 943 966 0.96 16 35 3.2e-05 0.0023 18.9 2.1 1 23 972 994 972 994 0.98 17 35 2.5 1.8e+02 3.5 5.4 1 23 1096 1119 1096 1119 0.94 18 35 2.3 1.6e+02 3.6 0.0 2 23 1146 1170 1145 1170 0.91 19 35 5.8 4.1e+02 2.3 4.0 1 23 1192 1214 1192 1214 0.97 20 35 1.9 1.4e+02 3.8 0.3 1 23 1218 1241 1218 1241 0.87 21 35 0.0006 0.042 14.9 1.5 1 23 1247 1269 1247 1269 0.98 22 35 0.069 4.9 8.4 3.8 1 23 1275 1298 1275 1298 0.96 23 35 0.0089 0.63 11.2 0.2 2 23 1306 1328 1305 1328 0.96 24 35 0.00031 0.022 15.8 2.9 1 23 1334 1356 1334 1356 0.97 25 35 1e-06 7.5e-05 23.6 0.5 2 23 1363 1384 1362 1384 0.97 26 35 0.26 19 6.6 2.4 1 22 1390 1411 1390 1411 0.96 27 35 0.043 3.1 9.0 1.3 1 23 1592 1615 1592 1615 0.93 28 35 0.036 2.5 9.3 0.1 2 23 1644 1666 1643 1666 0.95 29 35 0.48 34 5.7 1.6 2 23 1689 1710 1688 1710 0.96 30 35 0.0045 0.32 12.1 0.1 1 23 1714 1736 1714 1736 0.95 31 35 0.094 6.7 8.0 2.9 1 23 1741 1764 1741 1764 0.96 32 35 0.37 26 6.1 0.0 2 23 1934 1956 1933 1956 0.95 33 35 0.0099 0.7 11.1 0.7 2 23 1980 2001 1979 2001 0.97 34 35 0.0044 0.31 12.1 0.2 1 22 2005 2026 2005 2028 0.89 35 35 0.28 20 6.5 1.3 1 14 2033 2046 2033 2056 0.88
Sequence Information
- Coding Sequence
- ATGAAATCTGAAGCTAAAAGTGGCAAAAACTCAAAAGATTCCAAACGAGACAAAAAGAAAGCGTCTGTAGATGTCCATGATAATGATCCTGAAAGGGCTAAGAGAATTGAAAATGAGAACAGTCCCAAAAAAGATAACGTAGGTGGTAATAAAAAAGACAGGTCCGAAAGCGGGAAAAAATCTGAACGCGAACGTACGATTGTTGTTAAAATCGAAATCAAGAAAAAAACAGTACAGGGCGTAAATGGTGATAAAAGGCAAATATCAATGACCAGTAACAAATCGTCGAATGTCAGGCAAGACGATGTGATTGAAATTCTTGACGATTCATCATCTGATTCTGTGAATAATTATAGCAAGAAAAGATCTAGACATGACGATGACGATAATAATAATCAGGTCCAGGAAAGGAAACGATCtaaaaaagaacacaacaatGTTGATAAAAAGTCTAAAGACAAGGAGAGATCTATGAAAGATTCTGACAATGTTGAGAAAAAGCATTCAAGCAAGGAAAGATCTAATAAAGATAGGAATGGCCTTGACAAGAAGTCTAGCAAGGAAAGATCTAAGAaagattcaaatattttcgaGCATAGGTCTAAAACTAAGGATAGATCTAAGAAAGATTCTAAAAATGTTGAGAATAGGTCTAAAAGCAGGGAAAGATCCAGGAGCCGAGGTCCAGGAGTtgagaaaaatataaagaatttCAGACCTTTTCTTGATGAAGATACAGACGACTATGAGAAGAAAAGAGAAAGGTCTGATAAAAGTGAGGCTGGAAAATCTTCATCATCATATGGCAAGAATAAAACTGAGAGCAAGAATGGACAAAAAAAACGAAGTAGTAATGCTAAGGATGCCAAAACTAAGAAGACAACAAAGAAAGATGTTGATACTGTTAAATTAAAGACAGAAACGAAAAAAGCCAAACCAAAGAAAACAAGTACCTCTGTCGAAACGGGAACTCGTACAGACGGTTTGTCGCTTGAGATAAAAGTAACTGAGCTCGATAAACATTTGCACAATATACATACGATACTACTGAATTCTAACGCAACTCCCATTCAAAACCATACCGAAACTGGTTTCAAGTGCAGCTTCTGCGCCACACAATTCCTTACAGCCGCTGACCTCAAAACACACACGCTTGACGACCATGATGACGCTTACATCGAGAAATTTATGGTTGGAAGTCACATCTATTCATATGTGGTCAAATTGGACATAACCTCACTACGCTGCATTATGTGCACTCGCAAAATATTCACTCTGGAAAACCTCATTGAACATCTAGAAaccaaacacaacaaaatgttTCACAAGGATATAGAAAATCACATCCTCCCTTTCAAATTCCAAAGCGATATATTTACCTGCGTTATTTGCGATCGCAAGTTTGATCGTTTCAAACAGATGCAGCATCACATGAGCGTCCACTACAAGAACTATCTCTGCGACGAATGCAACGCACCTTTCATCAACAAAGCTACTCTCAGAAATCATATCGAAAGACATAAGAATGCGGTATTCACCTGCGATTTCTGCGGTAAATCCTTCGATACCAAGGTCAAGTGTAATGTTCACGAGAGCTACGTCCACATGAAAAGCCACAACCGCAACAAATGCACATACTGCTCGCAATTCTTCGTGAAATACTCACAGAAATTGCAACACATGGTTGCAGTTCACGGCCACAAACAACGTACCATTAATTGCAATATTTGCAACAAGATTTTCAAAACCAGGGAGAAGTTTACGAAGCACAACAAAAGGTACCATCTCTTGGAGCGAAACTACGAGTGCGATCAGTGCGACGGCCGTTTCTTCGATAGCTACGATCTGAAGCGACACAAACGCACCCACGAGAATTTGAAGCGGTTTGAATGCACGACCTGCGATAAGAAGTTCACCAGGCATGATAATATGTTGGAGCACATGCGACTGCACAATCAGGAGTTTAGGAAGCTCACGTGTGAGATTTGCGGATTGAATTATGCTAGTTTGAGCCGTTTCAACACTCATATGAGCAGGTCTCATAAGGACCGTGACGgtGATCAAGAAGACGCGACGGGTATCCAAATATATAATGGATATCCAAAATTCAGCAAACCCGATCCAGAAGAAATGGAAATGCAGAAACACaatgtaaaacaaataatacagtATTCTAACGCGACGCCACTATCACGTCATACAGATTTAGGCTATGGGTGCGCTTTTTGTCCTGTATTCTATCAAAAACCTTGCGATCTTAAGAAACATACACTAGATAATCACGATGTAAACACTAGAGCGTCTTTTATGAGTAAACCACGCTTCGGATCAGGAAGCTACATGGTCAAACTTGACGTAACAAACCTAAAGTGTTCTATATGCGAGCAGGATATCGAATATTTAGACGTTAAAAAACATCTCGAGACGCATGGAAAATATATTCACGACCTTTCAAAGAGTTACACGGTACCGTTCAAGTTTGATGACGATATTCTCAAGTGTATGTTCTGTAATGAAGTTTGCAGATCATTTAAAACACTACAGAAGCATATGAACGAGCATTATAAGAACTACGAGTGTCCAGTCTGTGGTGTTGGCTTCATCAATCAAATAACGGTTAAAACTCATTACAAAAACTCACATAAAATCGGGTTTTTCGCATGCGGCTGCGGAGAAGTTTTCGATACTATAAAGAAGAAGAAATTGCACGAACTGCACGCTCACAATAAACTTAAATACAAATGCGGATACTGTGATGAGTTGTTCAAGTCGTCTGATAAGAAACGGATTCATTTAATCGCTGTGCATAGTGTTAATTTCCCCACTATACAGTGCAATGAATGTGATAAAAAATTTGCGAAACAAAGTCATCTTACCATTCATGTAAAGAAGGATCACAATAAAGAGACGCGATTCAAATGCCCTTATTGCAAGAAGGCTTTCTTCTTCAAATCTCAACTGGATTTACATATGATCAGGCACTTGCAGACGAAAGATTTCAAATgtGTCCTCACAGACTACAAACCCATAAAACTGGAAGTTGAATGGGATTTAGAAACAACCTTGGAAATTACAAGTATCAAAGAAGAGAGTTCATCTTCCGATGATAAAAAGAAAAGAGGTAAACGCGGGAAGAAGAGAAAAGTCGATGACTTCCGACCGCTTAAGATTAAACCACCTGCCAAAGCTGAGGTTTTAGACGTGGAAAAACATAGATACAACGTTCGGGCATTATTACAATACTCCAATGCGACGCCGATCAGGGCGCACTACGCAGGGAACGGGTACGCTTGCTGCTTCTGCAAACAGTACTTCCACAAAGCTTCGGAACTCAAGGAGCACACGCTCCAATCTCACGACGAACAAACCAAAAAGAAATACATGCAGAAGGCATTCCTATTCAAGCTATTTGTCAAACTTGATATAACACTACTGCGTTGTACAGTTTGCTCAGCTGACATTATATTTGATACTCTCGAACAACTCATAGAACATTTGAACTCGGTACACCAAAAAGGAATACATACGGACATTAAGAACCAAATCATGTGTTTTAAACTAGATGAGGAAGTTTTTCGGTGTTTCATCTGTTCAGTGGAATATCACAGCTTTAAAAATTTACTAGAGCATGCACATTCGCACTATAGGAACTTTATATGCGAAACATGCGACGCTGGTTTTATAAACAGACTAAAATTATACGGACACGTCTACAATAAGCATAAAGGCGCAGGTGTGCATAAATGCAACACTTGCGCGAAAGTTTTCGATACtcccataaaattaaaaacccaCGAACGAATACATTTAGGTACAGTTCTCTACAAATGTCACGAGTGCAACGACAAGTTCACAAAGAAGAAAGAGAAAAGAGATCACATGATAAACGTACACGGAGCTAAATTCGCCAGGATCAAATGCACTGCTTGCGACAAGCTGTTTATAAGTAAAGCGTCCCTTAGCGTCCACGTGAATAGAGACCACTTGATGGATAGGCGACATCAGTGCGAACTTTGTGAAAAGACTTTCTTTACATCATCGTTCTTGAGGGATCACATGGTATCACATTCTAGGGTTAGAGAGATTCAATGCGACGAATGTCCCAAAACGTTTGCGAGGAAGAAGGCTTTACGTGAGCATATGAAGTCTCACACAGGTGATCGTAGGTTCAAGTGCACATTCTGCGACATGGCTTTTCTGCAGAAGTGTAGCTTGAAAGGGCATTTGAGAAGTATCGTCGTCAGAGACCACAAAGCAATCAAATCGGAGGTAGGAAACTCTTGGGGCGTTACCATTGTTAAAGTGAAAGGTCCTAATACTGAAAATCCTGTAATTGACAATACTAATGTAAAATCCTATAAAGAATCCAAACCAAAGGATCGGAAATTGAAAGAAATTAAAGAGAAAGCAAAGAAATTTAATATCGAACAAGTATCTGTTTTTGAGAAACCCGTTCATCTATCGGCTGACAAAGAACCTAATGTTTCCAAAGAAGCAAAATCCACAGctactttaaaaatcaaaattaatccACCACccgatattataataaaacaaattaaaccgAAAACTGATAAAACTAAACCCAAAGAGACTAaacaaaaaccacaaaatataaaagaaccCCTAACAATCCCACTAATTCAAAGGATAAAAATAGTCCCTCCACCAGACATGGACTTTATGATGGAGCTAGATAAGCACAGATTCAACATACGCACCGTAATGCAATTCTCAAACGCAACCCCAATCAGAAACCACGTTAAAAGCGGCTTTGTTTGCTGCTTCTGCGACGCCCATTTCCCCAAACCGGCAGACCTGAAAATTCACACAATCGAAACCCATACAGAAGACGAAAGCAAAGACAAGTTCTTCCGAAAGAAAGCGGTCTTATACTCATTCATGGTAAAACTAGATATAACGCATCTAGTTTGCAATATCTGTCAAACTGCTATCGAGACGCTCGAGCATCTTATATCCCACCTCAACAGTATCCACCAGAAAAACTTACACACGGATATAAAGAACCACATCGTCTGCTTCAAATTCGACAACGATATGATGAGATGCCTCGTCTGCGCTCATGAGTTCAATAGCTTCAAACTGCTATCCGAACACATGAATCAGCATTATACTAACTTTGTTTGCGATGAATGCGGTGCTGGGTTCATTAACAGAAGGCAGTTGCTCCTGCACTCTGATAAACATAAAGTGGGGGAACACAAATGTGGGTCTTGCGATAAGGTCTTTCAATCTTTGAAGAGGATGAAGACCCACGAACGTGTCACGCACGTGTATAACTCTGGTTTAGGCACGCACGGATTTAGATGCCACCTTTgtAAGAACGCGAGTGACGTCAAACCTATTAAACAAGAACTAACGTCTAGTTCTTGGCAAGTAACTATCGTTAAAGTGGATGGTAATGGTGAATCGCAAACAGTTAAAAAACTACCCAAGACAATTATACAAAAACCAGATGAAACAACCATTAATGGAATTAAATTTGGTGACATGAAAGCTATTTCTTTAAAGAAAACTAAACCAGTGCAAGTGCAGGAAATATCAGAACTTGAAAAGCAGAGATTTAACATTCGGACAATATTGCAGTATTCCAATGCGACGCCAATACGAACGCATTCTATATCTACGGGATATGGCTGCTGCTTTTGCAAAAAATACTTCCATAAGTCTTGCGACCTCAAAACTCACACTAAAAATCACGACGAAGAAGCGAAAACCAAGTTCATGAAAGGAGCCACATTATTTACGTTCCTTGTAAAATTAGACGTAACTGGTTTATCCTGCAACATTTGCAAAGTCTCAATAGATAATATAGAAGAACTGATGGATCATCTAAATAAAGCGCACGATAAAAGACTGTATACAGAATTAAAGAATTATGTTGTATGCTTTAAACTGCCCACTGATGATGTCATGAAATGTTACATTTGTGACGCTGAGTTTAAAAGCTTCAGAGTATTACAGGAACATATGAAGAATCATTCCACTAATTTTATTTGCGACGAGTGTGGAGTTGGGTTTATAAATCTGGGTCAGCTGCGGCATCATTCTGATAACGTACATATGATATCAGAGTACAAATGCGAGAAATGTAACCAAGTTTTTCCGACGTCGAAAAAGAAGTATTTTCATGAGCGCGCTGCGCATTCTCAGTTTAAGAGGAGGTAG
- Protein Sequence
- MKSEAKSGKNSKDSKRDKKKASVDVHDNDPERAKRIENENSPKKDNVGGNKKDRSESGKKSERERTIVVKIEIKKKTVQGVNGDKRQISMTSNKSSNVRQDDVIEILDDSSSDSVNNYSKKRSRHDDDDNNNQVQERKRSKKEHNNVDKKSKDKERSMKDSDNVEKKHSSKERSNKDRNGLDKKSSKERSKKDSNIFEHRSKTKDRSKKDSKNVENRSKSRERSRSRGPGVEKNIKNFRPFLDEDTDDYEKKRERSDKSEAGKSSSSYGKNKTESKNGQKKRSSNAKDAKTKKTTKKDVDTVKLKTETKKAKPKKTSTSVETGTRTDGLSLEIKVTELDKHLHNIHTILLNSNATPIQNHTETGFKCSFCATQFLTAADLKTHTLDDHDDAYIEKFMVGSHIYSYVVKLDITSLRCIMCTRKIFTLENLIEHLETKHNKMFHKDIENHILPFKFQSDIFTCVICDRKFDRFKQMQHHMSVHYKNYLCDECNAPFINKATLRNHIERHKNAVFTCDFCGKSFDTKVKCNVHESYVHMKSHNRNKCTYCSQFFVKYSQKLQHMVAVHGHKQRTINCNICNKIFKTREKFTKHNKRYHLLERNYECDQCDGRFFDSYDLKRHKRTHENLKRFECTTCDKKFTRHDNMLEHMRLHNQEFRKLTCEICGLNYASLSRFNTHMSRSHKDRDGDQEDATGIQIYNGYPKFSKPDPEEMEMQKHNVKQIIQYSNATPLSRHTDLGYGCAFCPVFYQKPCDLKKHTLDNHDVNTRASFMSKPRFGSGSYMVKLDVTNLKCSICEQDIEYLDVKKHLETHGKYIHDLSKSYTVPFKFDDDILKCMFCNEVCRSFKTLQKHMNEHYKNYECPVCGVGFINQITVKTHYKNSHKIGFFACGCGEVFDTIKKKKLHELHAHNKLKYKCGYCDELFKSSDKKRIHLIAVHSVNFPTIQCNECDKKFAKQSHLTIHVKKDHNKETRFKCPYCKKAFFFKSQLDLHMIRHLQTKDFKCVLTDYKPIKLEVEWDLETTLEITSIKEESSSSDDKKKRGKRGKKRKVDDFRPLKIKPPAKAEVLDVEKHRYNVRALLQYSNATPIRAHYAGNGYACCFCKQYFHKASELKEHTLQSHDEQTKKKYMQKAFLFKLFVKLDITLLRCTVCSADIIFDTLEQLIEHLNSVHQKGIHTDIKNQIMCFKLDEEVFRCFICSVEYHSFKNLLEHAHSHYRNFICETCDAGFINRLKLYGHVYNKHKGAGVHKCNTCAKVFDTPIKLKTHERIHLGTVLYKCHECNDKFTKKKEKRDHMINVHGAKFARIKCTACDKLFISKASLSVHVNRDHLMDRRHQCELCEKTFFTSSFLRDHMVSHSRVREIQCDECPKTFARKKALREHMKSHTGDRRFKCTFCDMAFLQKCSLKGHLRSIVVRDHKAIKSEVGNSWGVTIVKVKGPNTENPVIDNTNVKSYKESKPKDRKLKEIKEKAKKFNIEQVSVFEKPVHLSADKEPNVSKEAKSTATLKIKINPPPDIIIKQIKPKTDKTKPKETKQKPQNIKEPLTIPLIQRIKIVPPPDMDFMMELDKHRFNIRTVMQFSNATPIRNHVKSGFVCCFCDAHFPKPADLKIHTIETHTEDESKDKFFRKKAVLYSFMVKLDITHLVCNICQTAIETLEHLISHLNSIHQKNLHTDIKNHIVCFKFDNDMMRCLVCAHEFNSFKLLSEHMNQHYTNFVCDECGAGFINRRQLLLHSDKHKVGEHKCGSCDKVFQSLKRMKTHERVTHVYNSGLGTHGFRCHLCKNASDVKPIKQELTSSSWQVTIVKVDGNGESQTVKKLPKTIIQKPDETTINGIKFGDMKAISLKKTKPVQVQEISELEKQRFNIRTILQYSNATPIRTHSISTGYGCCFCKKYFHKSCDLKTHTKNHDEEAKTKFMKGATLFTFLVKLDVTGLSCNICKVSIDNIEELMDHLNKAHDKRLYTELKNYVVCFKLPTDDVMKCYICDAEFKSFRVLQEHMKNHSTNFICDECGVGFINLGQLRHHSDNVHMISEYKCEKCNQVFPTSKKKYFHERAAHSQFKRR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -