Basic Information

Insect: Eupithecia pulchellata
Gene Symbol: -
Assembly: GCA_963931895.1
Location: OZ007545.1:2753346-2755747[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.49 35 5.7 7.1 1 23 163 185 163 185 0.98

2 16 4.8e-05 0.0034 18.3 1.3 1 23 191 214 191 214 0.93

3 16 0.32 23 6.3 2.1 3 23 223 243 222 243 0.97

4 16 0.00046 0.033 15.2 1.4 1 23 250 272 250 272 0.96

5 16 2.7e-06 0.00019 22.3 1.5 1 23 281 303 281 303 0.97

6 16 0.00046 0.033 15.2 6.2 1 23 309 331 309 331 0.99

7 16 2.9e-05 0.002 19.0 4.7 1 23 337 359 337 359 0.98

8 16 1.6e-06 0.00011 23.0 3.3 1 23 365 387 365 387 0.99

9 16 6.7e-05 0.0048 17.9 1.6 1 23 393 415 393 415 0.97

10 16 8.1e-07 5.8e-05 23.9 0.2 1 23 421 443 421 443 0.98

11 16 1e-06 7.3e-05 23.6 6.4 1 23 449 471 449 471 0.98

12 16 1.2e-06 8.7e-05 23.4 0.4 1 23 477 499 477 499 0.98

13 16 2.6e-06 0.00018 22.3 2.1 1 23 505 527 505 527 0.98

14 16 3.7e-06 0.00026 21.8 2.9 1 23 533 556 533 556 0.96

15 16 9e-06 0.00064 20.6 1.0 1 23 562 584 562 584 0.97

16 16 0.15 11 7.3 5.6 1 23 590 612 590 612 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.49	35	5.7	7.1	1	23	163	185	163	185	0.98
2	16	4.8e-05	0.0034	18.3	1.3	1	23	191	214	191	214	0.93
3	16	0.32	23	6.3	2.1	3	23	223	243	222	243	0.97
4	16	0.00046	0.033	15.2	1.4	1	23	250	272	250	272	0.96
5	16	2.7e-06	0.00019	22.3	1.5	1	23	281	303	281	303	0.97
6	16	0.00046	0.033	15.2	6.2	1	23	309	331	309	331	0.99
7	16	2.9e-05	0.002	19.0	4.7	1	23	337	359	337	359	0.98
8	16	1.6e-06	0.00011	23.0	3.3	1	23	365	387	365	387	0.99
9	16	6.7e-05	0.0048	17.9	1.6	1	23	393	415	393	415	0.97
10	16	8.1e-07	5.8e-05	23.9	0.2	1	23	421	443	421	443	0.98
11	16	1e-06	7.3e-05	23.6	6.4	1	23	449	471	449	471	0.98
12	16	1.2e-06	8.7e-05	23.4	0.4	1	23	477	499	477	499	0.98
13	16	2.6e-06	0.00018	22.3	2.1	1	23	505	527	505	527	0.98
14	16	3.7e-06	0.00026	21.8	2.9	1	23	533	556	533	556	0.96
15	16	9e-06	0.00064	20.6	1.0	1	23	562	584	562	584	0.97
16	16	0.15	11	7.3	5.6	1	23	590	612	590	612	0.99

Sequence Information

Coding Sequence: ATGTTACAGCTCAATCCAGAAGATGGGAAACCAGAAACTATTTGCTACATTTGCTTATCACAGCTGCTGAAGTGTAATAAATTCAGAGCCATGTCGCGAAATGCAGATATTATACTTGCAAATGTCTTTAAAGATAGAGTTcagCTCACACAAGAAACATCTATATTGTTGTATAACAGAACACATTTTTACTTATCACAATCAGCTGTGCAACATACCAGTATCAATGATATCGAAGCAGAAACGGTGAAGGAAGAATTTGCAGAACCAGCTGactattatgatgatgatgatgatatcccTTTAACACAAATCAAAAAAGAAGctaCCAATAGACTCCCAGAATCAAAAGACACATCAAGAATTTACCTGAATGATGTAAAATCTGAATCAGACatcaaaatatgtttaaaaGATGAAGATTCAGAAAATAGAACAAACCAGGCGAAGTACATTAATGAACCCCCTGATGAGTCTGGCTTGTGTTATAACTGTTGCGTTTGTAACAAAAAACATGTGACGAAGAAGGCATTAGATCACCATATGAAAGTACACGATAAAAGTAGATCATTTGCGTGCGACATCTGCAAATATAGATTTAATACTAAAGCAAATCTCAAAACTCATAAAGAAAACCTGCATAGAAGATATGATGAGACTGTAGCATGCACCATTTGTCACAAACTAATGAATAGTCAACAAATCTTAAAAAGGCATATGAAAATTCATTTGAAAAGAGTTCAAAATCATGCATGTGATAAATGTGAGATGAAATTTGGTGATAAGAGCACCTTAGTTAGGCATAAAGCTACCCACACAGAAGATTTGCTGGCTAAGCCTCACCGCTGTCCAATATGTGGTAAATCCTTCTCAGTTATCTATTACTTAAAAAGTCATTTAAAACTCCACAGTGGAGTAAAGCCATTTACGTGCGAAAGATGTTGTAAAGCCTTTACGCTTAACAGTCACCTTAAGATCCATATGAGGACGCATACAGGTGAAAAACCATATGCTTGTGCCAAATGTGACAAACGCTACTCAAGCCACGCTCATTTAAAATATCACATGAATACGCACACGGGAGAGAAAGGATACACTTGCGATGTGTGCTCAAAGTCATTCTCAGAAAGCAGTCATTTCAAAAGTCATATGCAGATTCACAGTGGCGAAAAGCCATTTGCTTGCGATGTGTGCGATAAGAAATTTATTGGTCACACTAACCTGAAGCTTCATAAGAGAATTCATACGGGCGTTAAGCCCCATGTTTGTGATATATGCGGGAAGGCGTTTGCTCAAAAATCGGTACTGATAATACATGTTAGGACTCACACTGGCGAAAAGCCATATGCTTGCCATAGATGCGGCAAAACTTTCACCATGTCAACTCATTTACGAACTCATATGCGCACACATACTGGAGAGAAGCCATACGCCTGCGAATTATGCGGAAAGACATTTGCAGAGAACGCTCGACTGAAAAGACACCTAAGAACGCACAGTGGCGAAAAGCCATATGCTTGCACGATTTGTCATAAATCATTCGCAGATTACACAAATATGAAAACTCATATGATAACTCATACGGGAGAAAAGCCATATACATGCGATCGGTGTGGTAAAACCTTTACCCAACAAGGAACAATGAAAAAACACATACAACATGTTCATTTAAAGGAGAAATCTCATATTTGTGAGATGTGCCCAAAGTCATATGCTAAAAGACAGGCATTGAAAGTTCATATGAGATCTCACACTGGAGAAAGGCCATATAAATGTGATAAATGTTGTAAAACATTTATGACAAATGAGATTATGAAAAGACATTTGAAAACGCACAGTGAACCTACAGATTTAAACTAG
Protein Sequence: MLQLNPEDGKPETICYICLSQLLKCNKFRAMSRNADIILANVFKDRVQLTQETSILLYNRTHFYLSQSAVQHTSINDIEAETVKEEFAEPADYYDDDDDIPLTQIKKEATNRLPESKDTSRIYLNDVKSESDIKICLKDEDSENRTNQAKYINEPPDESGLCYNCCVCNKKHVTKKALDHHMKVHDKSRSFACDICKYRFNTKANLKTHKENLHRRYDETVACTICHKLMNSQQILKRHMKIHLKRVQNHACDKCEMKFGDKSTLVRHKATHTEDLLAKPHRCPICGKSFSVIYYLKSHLKLHSGVKPFTCERCCKAFTLNSHLKIHMRTHTGEKPYACAKCDKRYSSHAHLKYHMNTHTGEKGYTCDVCSKSFSESSHFKSHMQIHSGEKPFACDVCDKKFIGHTNLKLHKRIHTGVKPHVCDICGKAFAQKSVLIIHVRTHTGEKPYACHRCGKTFTMSTHLRTHMRTHTGEKPYACELCGKTFAENARLKRHLRTHSGEKPYACTICHKSFADYTNMKTHMITHTGEKPYTCDRCGKTFTQQGTMKKHIQHVHLKEKSHICEMCPKSYAKRQALKVHMRSHTGERPYKCDKCCKTFMTNEIMKRHLKTHSEPTDLN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00698504;
90% Identity: -
80% Identity: -