Epul023184.1
Basic Information
- Insect
- Eupithecia pulchellata
- Gene Symbol
- -
- Assembly
- GCA_963931895.1
- Location
- OZ007548.1:533853-545327[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.6e-05 0.0085 16.4 0.0 7 35 46 73 42 78 0.88 2 3 1.3 6.9e+02 0.7 0.0 18 30 239 251 237 252 0.87 3 3 1.3 6.5e+02 0.7 0.0 5 34 260 288 259 298 0.84
Sequence Information
- Coding Sequence
- ATGGACCACGGCATACCCCTGAACATACACGCGAGACCCCGAATCGTTGGACGTAGACCGAACGCGATAGTTAATATAGAAACAGATGTCTTCCAAGAGAAATCCTACAAGCAGTATTCATCGCAACACCTCCGAGACGCGCTCATCGCTGTAAAGAAAGGTTATAGTGTGTACGCAGCGTCGAATAAGTACGGTGTGCCAAGGAAAACTTTGCGGAATTGGATGGAAAAGTACGATATTAAGAGTCAGTTTTCTAAAGGACGTCGTGGTACGAGGACGTCGACTCAGATATTGGATCCGTTGAATCTTTTGACTGAGGCGCGGGTGGAGAGATGTTTGAGGCTGTTCGAATCCGATGGAGACAGCATAAAAGATGACGTCATTCTGAATCCGTTTCTACAGTTACGTATAGATTTCGCCATATCGAACGTCCAGTGCCATTACGACAGCGGATCGGAAGCCGACGCGTTCGGAGAATCCAGGGAAGAGTTAACGCGAGACGAGTTGACAGACGACCACACGTACGGGGCGAGGAGTTTCGATAGGAGTTACGAACCGCCCGCGTTCGTTATACGTCAGACAAATCAAGTACAAGTGGGGCCTCTCCAGTCGCTATCGGAGCTCCCGCTGCGGCCCAAGATGATGACGATAGGGCCCATGTGCCCCTCCGTGAATGTGATACATGTGGGGGACCAACCAACAGACCCAATGACAACAGTGACGCAAGCGCAGCCCGAGTACAATATAAACAAACGCATCCGGCGCAGCGAGGTGGTGCTACGCGAGGCAGCGGACTGCGTGAGTCGCGGGTTCACTTTCCAGACCGTGTCAGAGCAGttcaaaatacctatttctACCATCAGATTTTTCATGGCAAGAAAAGGTATATTACCGAGACGACGGCGGGGCCGGACGACACAGGCCGCTGCAGCATCAAGCCCTGAGCCTCCGTTCCACATGCAGCACTTCAAGCTGCCACGCTCCGTCGGAAtcaaggctgatgatgatgaagatgaggaTACTAACACGTAG
- Protein Sequence
- MDHGIPLNIHARPRIVGRRPNAIVNIETDVFQEKSYKQYSSQHLRDALIAVKKGYSVYAASNKYGVPRKTLRNWMEKYDIKSQFSKGRRGTRTSTQILDPLNLLTEARVERCLRLFESDGDSIKDDVILNPFLQLRIDFAISNVQCHYDSGSEADAFGESREELTRDELTDDHTYGARSFDRSYEPPAFVIRQTNQVQVGPLQSLSELPLRPKMMTIGPMCPSVNVIHVGDQPTDPMTTVTQAQPEYNINKRIRRSEVVLREAADCVSRGFTFQTVSEQFKIPISTIRFFMARKGILPRRRRGRTTQAAAASSPEPPFHMQHFKLPRSVGIKADDDEDEDTNT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -