Epul014774.1
Basic Information
- Insect
- Eupithecia pulchellata
- Gene Symbol
- -
- Assembly
- GCA_963931895.1
- Location
- OZ007534.1:11083739-11084491[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1e-07 5.3e-05 23.4 0.0 14 37 30 53 25 57 0.90 2 2 9.8 5.1e+03 -2.1 0.0 22 33 90 101 89 105 0.79
Sequence Information
- Coding Sequence
- ATGGGTCGAAATACTAAGGGCAATGTTAACCGTAAGAAGGGCACTCTCACGACAGCTGAAATAAAGAAAGGAATTGACTTGCATATCAAAGGAAAGCTAAGCCTTAGAAAGGCTGCCAAAGAATCAGAGGTTCCATATCCGACGCTACGTAGATACGTCCTAAAGTATATCTCAAACCCTTCTGCACGATTGGAGCCACATTAcgatgtaaaaaaaatcttcaccGAAGAGCAGGAAAACAGTCTCTATGATTATATAATTGAGTGTGCTAGTAAGTTTTATGGGATATGTAAGGAGGTATTCAGCTACAAATCCACAACGGCAAACCTAAAGAATCATTTAAAAAGAAAGCATATTTCTTTATATTCACTGCCCTCGGTAGTGGAGAAAAGTGGATCTACCAGGCTAGTCGACGACAGACATAAAGATTCACCATCCAATTTAAGAACTTCGACATCCACGACAACGACTTCAACATCCACGACGACGTCGACAGCAACATTGGCGTTGATTCAAATACCTTCAACGTCAGGTGCTAGTGATGCGACATCTTCTGAAAATGGCGGTGATAGTGCTGGACAAGCAGCGACAGTAACCGTTGTAGCAAAAAAACGAAAAATCCAAAATGATATGGATGcttacgtaaataaaaaaatttcgaAAGAACAAAAAACAGCAATCGACAATGATGTTTTGGAGCTGTGTGTAGACGCATTTCATCCATTTAGCATCGTTGAGGAACGATCATTCTGA
- Protein Sequence
- MGRNTKGNVNRKKGTLTTAEIKKGIDLHIKGKLSLRKAAKESEVPYPTLRRYVLKYISNPSARLEPHYDVKKIFTEEQENSLYDYIIECASKFYGICKEVFSYKSTTANLKNHLKRKHISLYSLPSVVEKSGSTRLVDDRHKDSPSNLRTSTSTTTTSTSTTTSTATLALIQIPSTSGASDATSSENGGDSAGQAATVTVVAKKRKIQNDMDAYVNKKISKEQKTAIDNDVLELCVDAFHPFSIVEERSF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00702192;
- 90% Identity
- iTF_00702192;
- 80% Identity
- iTF_00702192;