Epul018331.1
Basic Information
- Insect
- Eupithecia pulchellata
- Gene Symbol
- -
- Assembly
- GCA_963931895.1
- Location
- OZ007539.1:5087372-5088120[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.4e-08 7.3e-06 26.2 0.0 1 33 14 46 14 53 0.93 2 2 2.2 1.1e+03 -0.0 0.0 15 24 74 82 72 90 0.85
Sequence Information
- Coding Sequence
- ATGCCCCGAACTTGCGTAAAAACAAAGATTAAAACCTACACTCCACAAAATTTAGCTGAAGCCagcgaaaaagtaataaatggCGAACTGACGCAATACAGTGCAGCGCAACAGTACAATATTCCCATGACGACTCTTTTTGATAACATTAAAGCAAGTGTAGGAAATCTCAGGCCAAATGCAGGTGCAGACTGGTTCATTAATTTTCGGAAACGACATGGATTGTCTATCAAAAAAGCACAGTCTGTAGAATACGTGAGAAAAAAAATGACTGATACTTTCGCCATTGCtgaatattttgatttactGCAAAATACTTTAAAAGATTTGAATCTCTTTGAAAGACCACAGGCCGTATGGAACTTGGATGAAACATCAATGTGCCTGGATCCATCCAAAACAAAAGTTgttggtaaaataaacaaaccttgTTCAAGAACAACTTACGGAAGTGGAAAAGAAAACACAACCGTGTTGGCAGGTGCAAACGCCAGCGGCAAGAAGTTGCCGCCTTTGATTGTTTTCAAAGGCAAATGCATAATGCAAAGGCATCTTATTGAGTACATAGAGGTTAAACAATAa
- Protein Sequence
- MPRTCVKTKIKTYTPQNLAEASEKVINGELTQYSAAQQYNIPMTTLFDNIKASVGNLRPNAGADWFINFRKRHGLSIKKAQSVEYVRKKMTDTFAIAEYFDLLQNTLKDLNLFERPQAVWNLDETSMCLDPSKTKVVGKINKPCSRTTYGSGKENTTVLAGANASGKKLPPLIVFKGKCIMQRHLIEYIEVKQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -