Epul024315.1
Basic Information
- Insect
- Eupithecia pulchellata
- Gene Symbol
- -
- Assembly
- GCA_963931895.1
- Location
- OZ007550.1:3872030-3872650[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1e-09 5.3e-07 29.8 0.0 3 40 18 54 16 56 0.94 2 2 9.1 4.7e+03 -2.0 0.0 14 22 138 145 131 146 0.73
Sequence Information
- Coding Sequence
- aTGTCAGGAACTCGAAGTACGACTAAAAATCTGAAGGTGAAATGGGGCCAAGATGATTTAAATAGGGCATTCAAACATGTCGAAGAGGGGACCCCGATAAGAGAGGCAGCTCGGAAAAATGGCATCCCATTTTCTACCCTCCAAGAAAGACTAAGGAAGAAGAACTGTGAATTGCCAACTATGGGAAGAAATCCAGTGTTCACGAGAGAACAAGAAGCAGAAATGGCAGACCAGGTAAAGTTCCTTGGTAACATATTTTATGGCTGCACTTCAATTCAAATAAGGAAGATGGCTTATGAATACGCTGTTAAAAATTGCATTAAGCACAACTTTAATGAAGCTTTTAGAATGGCTGGAAAAGATTGGCTAAAAGGGTTCATGAAACGAAATAAGTTAAGTAATCGAAAAGCTGAAGGCACGAGTTTGAATAGAGCTACAGCTTTTAACAAAAATGAAGTTGGCATATTTTTCAAGCTGCTTGAATGGGTTATGAGTCCGCCAAAGGCTACGTGTGCGATTTATGCCGCTGAAAAGCTTGACTGGTATTGCCAACCTACTGACCGGTATTATCCCCTATGTCGGTTAAAGGCGGTCAatgccattttattttttaagagttga
- Protein Sequence
- MSGTRSTTKNLKVKWGQDDLNRAFKHVEEGTPIREAARKNGIPFSTLQERLRKKNCELPTMGRNPVFTREQEAEMADQVKFLGNIFYGCTSIQIRKMAYEYAVKNCIKHNFNEAFRMAGKDWLKGFMKRNKLSNRKAEGTSLNRATAFNKNEVGIFFKLLEWVMSPPKATCAIYAAEKLDWYCQPTDRYYPLCRLKAVNAILFFKS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -