Epul017857.1
Basic Information
- Insect
- Eupithecia pulchellata
- Gene Symbol
- -
- Assembly
- GCA_963931895.1
- Location
- OZ007538.1:10837365-10837856[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2e-11 1.1e-08 35.3 0.0 1 43 18 61 18 62 0.95
Sequence Information
- Coding Sequence
- ATGCCAAGAGTTTATAAACGAAAATTGGGACCTCGGAAGTGTGCATACTATACTGATGAACAATTACAGCTATGTATCGCAGCTGTGCAATCCGGAAAAATTACAGAAAGGAAAGCTAGCGAGCATTTTAATATTCCGCGACAAACCATTGTTAACAAACTTAAAAAGGCCCATATGCATGCCCCTGGGCCCCGTCCGATCCTCAATGAAGATGAGGAGAAATATTTAGCAGCACATACTGAGCAGCGAGAAAACAACGCTTTTGTAGTCGTAAAATATGGCGGTAAATTGTACGCTGGTATGATTGCTGACTTCGATGAAGAGGGAGCAACTGTGGACGCGATGCAAAGATGGGTAAAGACATGGAAATGGCCACAGACAAATGATATTAGCTATTTTGGATGGAATGACATCATTGGATGCATTGACCCTCCAAAAGTGATCAACCGCCGCGGATTTCTCAGCATCAAAGAGCTGGACAACATAGAGTAG
- Protein Sequence
- MPRVYKRKLGPRKCAYYTDEQLQLCIAAVQSGKITERKASEHFNIPRQTIVNKLKKAHMHAPGPRPILNEDEEKYLAAHTEQRENNAFVVVKYGGKLYAGMIADFDEEGATVDAMQRWVKTWKWPQTNDISYFGWNDIIGCIDPPKVINRRGFLSIKELDNIE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00701894;
- 90% Identity
- iTF_00701889; iTF_00701894; iTF_00701895;
- 80% Identity
- -