Basic Information

Gene Symbol
ct
Assembly
GCA_963931895.1
Location
OZ007541.1:9873613-9899669[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 4.7e-27 4.3e-23 81.7 0.0 3 70 237 305 235 312 0.94
2 3 5.5e-32 5e-28 97.5 0.0 4 77 637 711 635 713 0.96
3 3 7.8e-31 7.2e-27 93.8 0.0 3 75 840 913 838 917 0.95

Sequence Information

Coding Sequence
ATGCACCAACAATTGATATCGAAGATCGCCCAGCTAGTAGAAGACGTGCGCAGGCTCCAGTCGTCGCTTGCAGCGCTGCAGGAGGCTCACGCGCAGCAGTTGCAGCGGCTGGAGGAGAGGTTGGACGAGAAGATACAGCACATCGCTCGGCTGGAGGCGAGGCTGGACGGGCAGCGGGACTATGACGATGTCAAGAGAGAGATCAACATGCTCCGCTCGCTAGACCTGGGCAGCGAGCGATCAGACCGCTCCGACCGCCTGGACCGTTCAGATCGCTCTGATCGCCTAGAACGCCTAGAGCGCCCCGATCGGCTAGACCGCCCTGATCGGCCAGATCGCCTAGAACGTGAGCGAATCGAGCGCAAGCCCGAACGCTCGCCGAGCGTTGCGCCCACCGAACGAAGCTCTGTAGAGCGTGAACGGAGCGCTGAAAGAAGAGAACCAGGTCCCGAGGAGTGGCCGAGCACGCCTCCGCTCAACAATAACACGACTCACCACAACAACAATGGCCCGACGCCGCTGCCGCTGCCCCCGCCGAGCCCCTTCCGTTTCGACGACCACCGTCCCTACCGCTTCGCTGACGACATGGGACCCTTACCACCAGGCGCTTTGGTCGGACGACTCGGAGACTCTCTGATCCCCAAAGGGGACCCCATGGAAGCGAGATTGCAAGAGATGCTCCGTTACAATATGGATAAATATGCGAACAGCAATCTGGACACTCTTCACATCAGCCGAAGAGTCAGAGAGTTGCTTTCGGTCCACAATATTGGGCAGAGATTATTCGCGAAGTATGTTCTGGGGTTGTCTCAAGGGACGGTGTCAGAGCTCCTGTCGAAACCGAAGCCCTGGGACAAGCTGACTGAGAAGGGACGGGACTCCTACAGGAAGATGCACGCGTGGGCTTGCGACGAGGCAGCCGTGATGCTACTCAAGTCTTTGATCCCTAAGAAAGTTGGTTCGAAGGATGGGAGTATTGGTCCTGGTGGGTTCGGAAGGTCCGACGGCGAGGGAGACGACCGGCTGGCTCACATCCTCAGCGAGGCTTCTCATATGATGAAGACGCCCTCGGGAGCGCCGATCAACGATGATTCTAGAAGCAATGAAGACTCCAGCTCGCCTAGGACGCAGTGTCTTTCACCTTTCTCTAAGGATTCGAGCCAAAACAGAAGGCTGAAGAAATATGAGAACGATGACATCCCTCAGGAGAAGGTGGTTCGGATCTATCATGAGGAGCTAGCCAAGATCATGACCAGGCGGGTCGAAGATATCCGTCACAACCGGGAGAGTTTCCCTGGTATGTTTCCCCCCTTTTTCAGCGGTGGCATGCCCCCCCACATGGAACGCCCCCCTGAAGACATCCGCATGGCGTTAGAGGCGTACCACAGAGAACTGGCCAAGATCCAACCTGGAGGAAATATCCCCAATCTGCACAACCTGCCAGGAATGCCCCCTTTCCCGAACCTCCTCGCTTTGCAACAGCAGGCGATGCAACAAGCACAGAACCAACACATCAACGGTGGAGCTGTCCAAGATCTCTCACTACCGAAGGATAAGAACGCCAAAATAAACGGAATGACTGATAGCGATAAGGAAAGATCAATGGACGCTGAAGAGGCGATCCGACACGCTGGCAGCGCGTTCTCGCTGGTCCGACCGAAGTTGGAACCAGGACAGTCCACGGGATCCTCCGCTTCAAGTCCGCTGGGAAACGCGATCCTACCTCCAGCGATAACGCCTAACGATGACTTCAACACTTCCGCGGCCGCCAGTCCACTCCAACGCATGGCTTCCATCACCAACAGCCTGATCTCCCAGCCCAACAACCCTCCCCACCACACACCAGCTCAACGATCGATGAAAGCGGTTCTTCCACCTATCACACAGCAACAGTTCGATCTCTTCAACAACTTGAATACTGAAGACATCGTCCGAAGAGTGAAAGAAGCTTTGAGCCAGTACTCGATCAGTCAAAGACTGTTTGGAGAGTCTGTGCTAGGTCTGTCGCAAGGGTCGGTCAGTGACCTCCTGGCGCGGCCCAAGCCTTGGCACATGCTGACGCAAAAGGGGCGCGAGCCTTTCATCCGGATGAAGATGTTCCTGGAAGATGACAATGCGGTGCACAAGCTAGTCGCCAGCCAGTACAAGATCGCGCCGGAGAAGCTCATGAGGACTGGAAACTACAGCGGAGCACCGATATGTCCGCCAAACATGAACAAACCAATGCCTCCAACACAGAAGATGATCTCAGACGCCACCTCGCTGCTCAGCAAGATGCAGCAGGAACAGCTCCTAGGACCTGGTCACCTGGGGCACCTGGGACAGCCACCACCACTGCTGCTGACTCCCCCGGGCTTTCCTCCGCACCACGCGGTCACCCTTCCTCCACAACACCACGACAACAACAACAAGGAGAGgaaaccgccgccgccgccccagCCGCACCATCATCCACCCATCATGCGCAGTCTCCACCAACACATATCCCCTAGCGTCTACGAAATGGCCGCGCTAACGCAAGACCTCGACACGCAAACCATCACCACCAAAATCAAGGAGGCACTACTCGCGAACAACATCGGACAAAAAATCTTCGGAGAAGCTGTCCTAGGCCTATCGCAGGGTTCGGTCAGCGAGCTGCTGTCCAAACCCAAACCTTGGCATATGCTGAGCATTAAAGGTCGAGAGCCGTTCATAAGGATGCAACTGTGGCTCAGCGACGCTCACAACATCGACCGTCTGCAAGCCCTCAAAAACGAACGACGAGAGGCGAACAAGCGACGTCGCTCCAGCGGCCCCGGGCAGGACAACTCCTCCGACACGTCATCCAATGACACGTCGGAGTTCTACCACTCCAGCTCTCCCGGACCGACCACGGGGGCACCCTGCGCTAAGAAGCAAAGGGTTCTATTCTCTGAAGAACAGAAGGAGGCTTTGAGACTTGCGTTCGCTCTCGACCCCTACCCTAACATGCCGACGATAGAATTCCTTGCCTCAGAACTAGGGTTGTCGACGCGGACGATAACCAACTGGTTCCACAACCACAGGATGAGGTTAAAGCAGCAAGCGCCGCATGGTCTCCCAGCGGAACCACCTGCGAGAGACCAGTCCTCCGCACCATTCGACCCGGTCCAGTTCCGTTTACTCCTCAACCAGAGATTACTGGAACTGCAAAAGGAAAGGATGGGTTTGGCCGGAGTGCCGCTTCCGTACCCGCCGTACTTCGCAGCTAATTCCAATCTAGCTGCTTTGATCGGTCGTGGTTTAATACCTCCCGAAGACGCGGTGAAAGACCAGAGCGGAGGCCTAGATTTATCCATGCCTTTGAAACGGGAACCAGACGGCGAGGATTACGAAGATGATGATGTGGAAAGCAACCTCGGGTCGGAAGACTCGCTGGACGATGAGTCAAAGACTGAGCCGAAAGCGGCGTCGACGCCGACCGCCCGCTCCAGTAGACGGAAACCAGCCGCGCCTCAGTGGGTCAACCCTGACTGGCAGGAGGACAAGCCGAGAAACCCAGACGAGGTCATCATCAACGGAGTTTGCGTGATGAGAAGCGATGACTTCAGGCGAGAGTCTGAGGAGACGGTTCGTGTCGAGCCCTCTCCGGTCCCGAGAGAGGGGTCCCCCCTTCCCCCGAGGACCCCGCAGACGCCGCGGCCCCCGCACACGCCCGATGACGTCATACCTGAGGACAAGATAAAGTCAGAGACGGATGACGATCGGTGGGAGTACTGA
Protein Sequence
MHQQLISKIAQLVEDVRRLQSSLAALQEAHAQQLQRLEERLDEKIQHIARLEARLDGQRDYDDVKREINMLRSLDLGSERSDRSDRLDRSDRSDRLERLERPDRLDRPDRPDRLERERIERKPERSPSVAPTERSSVERERSAERREPGPEEWPSTPPLNNNTTHHNNNGPTPLPLPPPSPFRFDDHRPYRFADDMGPLPPGALVGRLGDSLIPKGDPMEARLQEMLRYNMDKYANSNLDTLHISRRVRELLSVHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDEAAVMLLKSLIPKKVGSKDGSIGPGGFGRSDGEGDDRLAHILSEASHMMKTPSGAPINDDSRSNEDSSSPRTQCLSPFSKDSSQNRRLKKYENDDIPQEKVVRIYHEELAKIMTRRVEDIRHNRESFPGMFPPFFSGGMPPHMERPPEDIRMALEAYHRELAKIQPGGNIPNLHNLPGMPPFPNLLALQQQAMQQAQNQHINGGAVQDLSLPKDKNAKINGMTDSDKERSMDAEEAIRHAGSAFSLVRPKLEPGQSTGSSASSPLGNAILPPAITPNDDFNTSAAASPLQRMASITNSLISQPNNPPHHTPAQRSMKAVLPPITQQQFDLFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGNYSGAPICPPNMNKPMPPTQKMISDATSLLSKMQQEQLLGPGHLGHLGQPPPLLLTPPGFPPHHAVTLPPQHHDNNNKERKPPPPPQPHHHPPIMRSLHQHISPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNIDRLQALKNERREANKRRRSSGPGQDNSSDTSSNDTSEFYHSSSPGPTTGAPCAKKQRVLFSEEQKEALRLAFALDPYPNMPTIEFLASELGLSTRTITNWFHNHRMRLKQQAPHGLPAEPPARDQSSAPFDPVQFRLLLNQRLLELQKERMGLAGVPLPYPPYFAANSNLAALIGRGLIPPEDAVKDQSGGLDLSMPLKREPDGEDYEDDDVESNLGSEDSLDDESKTEPKAASTPTARSSRRKPAAPQWVNPDWQEDKPRNPDEVIINGVCVMRSDDFRRESEETVRVEPSPVPREGSPLPPRTPQTPRPPHTPDDVIPEDKIKSETDDDRWEY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01338275;
90% Identity
iTF_00700898;
80% Identity
iTF_00701844;